BLASTX nr result

ID: Panax21_contig00026900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026900
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39657.3| unnamed protein product [Vitis vinifera]              101   6e-20
ref|XP_002280231.1| PREDICTED: pleiotropic drug resistance prote...   101   6e-20
emb|CAN65735.1| hypothetical protein VITISV_037751 [Vitis vinifera]   101   6e-20
sp|Q5W274.1|PDR3_TOBAC RecName: Full=Pleiotropic drug resistance...    99   3e-19
ref|XP_002321371.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18

>emb|CBI39657.3| unnamed protein product [Vitis vinifera]
          Length = 1406

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/115 (48%), Positives = 73/115 (63%)
 Frame = +1

Query: 61  HSMKLFSSFLFIFYDKFSVLLICCISSLYLMKTNG*NHSSCGILKKIFVISFVQIVILSS 240
           HS K   SF      K+ +   C      LMK N            I+V    Q+VI+++
Sbjct: 461 HSHKNALSFSKYSLSKWELFRACMSREFLLMKRNS----------FIYVFKSTQLVIIAA 510

Query: 241 ITMTVFFRTRMEVNYVHANKYLGALFYSLIILVVNGFSELSMTVARLAVFYKQRE 405
           ITMTVF RTRM+V+ +HAN YLG+LFY+L+IL+V+GF ELSMTV+RL VFYKQR+
Sbjct: 511 ITMTVFLRTRMDVDIIHANYYLGSLFYALVILLVDGFPELSMTVSRLPVFYKQRD 565


>ref|XP_002280231.1| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
           vinifera]
          Length = 1448

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/115 (48%), Positives = 73/115 (63%)
 Frame = +1

Query: 61  HSMKLFSSFLFIFYDKFSVLLICCISSLYLMKTNG*NHSSCGILKKIFVISFVQIVILSS 240
           HS K   SF      K+ +   C      LMK N            I+V    Q+VI+++
Sbjct: 503 HSHKNALSFSKYSLSKWELFRACMSREFLLMKRNS----------FIYVFKSTQLVIIAA 552

Query: 241 ITMTVFFRTRMEVNYVHANKYLGALFYSLIILVVNGFSELSMTVARLAVFYKQRE 405
           ITMTVF RTRM+V+ +HAN YLG+LFY+L+IL+V+GF ELSMTV+RL VFYKQR+
Sbjct: 553 ITMTVFLRTRMDVDIIHANYYLGSLFYALVILLVDGFPELSMTVSRLPVFYKQRD 607


>emb|CAN65735.1| hypothetical protein VITISV_037751 [Vitis vinifera]
          Length = 1417

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/115 (48%), Positives = 73/115 (63%)
 Frame = +1

Query: 61  HSMKLFSSFLFIFYDKFSVLLICCISSLYLMKTNG*NHSSCGILKKIFVISFVQIVILSS 240
           HS K   SF      K+ +   C      LMK N            I+V    Q+VI+++
Sbjct: 490 HSHKNALSFSKYSLSKWELFRACMSREFLLMKRNS----------FIYVFKSTQLVIIAA 539

Query: 241 ITMTVFFRTRMEVNYVHANKYLGALFYSLIILVVNGFSELSMTVARLAVFYKQRE 405
           ITMTVF RTRM+V+ +HAN YLG+LFY+L+IL+V+GF ELSMTV+RL VFYKQR+
Sbjct: 540 ITMTVFLRTRMDVDIIHANYYLGSLFYALVILLVDGFPELSMTVSRLPVFYKQRD 594


>sp|Q5W274.1|PDR3_TOBAC RecName: Full=Pleiotropic drug resistance protein 3; AltName:
           Full=NtPDR3 gi|55056942|emb|CAH39853.1| PDR-like ABC
           transporter [Nicotiana tabacum]
          Length = 1447

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/100 (53%), Positives = 66/100 (66%)
 Frame = +1

Query: 106 KFSVLLICCISSLYLMKTNG*NHSSCGILKKIFVISFVQIVILSSITMTVFFRTRMEVNY 285
           K+ +   C      LMK N            I++   VQ+ I++SITMTVF RTRM+ + 
Sbjct: 521 KWELFRACMSREFLLMKRNS----------FIYIFKTVQLAIIASITMTVFLRTRMDTDL 570

Query: 286 VHANKYLGALFYSLIILVVNGFSELSMTVARLAVFYKQRE 405
           VHAN YLGALFY+LIIL+V+GF ELSMT+ RLAVFYKQ E
Sbjct: 571 VHANYYLGALFYALIILLVDGFPELSMTITRLAVFYKQSE 610


>ref|XP_002321371.1| predicted protein [Populus trichocarpa] gi|222868367|gb|EEF05498.1|
           predicted protein [Populus trichocarpa]
          Length = 1250

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 58/134 (43%), Positives = 76/134 (56%)
 Frame = +1

Query: 4   SQINKC*VEFIIDPFLMGIHSMKLFSSFLFIFYDKFSVLLICCISSLYLMKTNG*NHSSC 183
           SQ+ K   E I  PF     + K   SF      K+ +   C +    LMK N       
Sbjct: 289 SQLGKNLEEEISKPFDKS-KNHKSALSFTSYSLTKWEMFKACSVREFLLMKRNS------ 341

Query: 184 GILKKIFVISFVQIVILSSITMTVFFRTRMEVNYVHANKYLGALFYSLIILVVNGFSELS 363
                I+V    Q+ I++SITMTV  RTRM ++ +HA+ Y+GALFY L+IL+V+GF EL 
Sbjct: 342 ----FIYVFKTTQLFIIASITMTVLLRTRMAIDAIHASYYMGALFYGLLILLVDGFPELQ 397

Query: 364 MTVARLAVFYKQRE 405
           MTV+RLAVFYK RE
Sbjct: 398 MTVSRLAVFYKHRE 411


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