BLASTX nr result
ID: Panax21_contig00026897
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00026897 (546 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002884353.1| hypothetical protein ARALYDRAFT_896292 [Arab... 149 4e-34 ref|NP_566191.1| NADH dehydrogenase (ubiquinone) Fe-S protein 6 ... 148 5e-34 ref|XP_002520027.1| conserved hypothetical protein [Ricinus comm... 143 2e-32 gb|AFK34710.1| unknown [Medicago truncatula] 142 3e-32 ref|XP_004151845.1| PREDICTED: NADH dehydrogenase [ubiquinone] i... 142 3e-32 >ref|XP_002884353.1| hypothetical protein ARALYDRAFT_896292 [Arabidopsis lyrata subsp. lyrata] gi|297330193|gb|EFH60612.1| hypothetical protein ARALYDRAFT_896292 [Arabidopsis lyrata subsp. lyrata] Length = 110 Score = 149 bits (375), Expect = 4e-34 Identities = 74/110 (67%), Positives = 78/110 (70%), Gaps = 1/110 (0%) Frame = -3 Query: 523 MASNLLKILTRXXXXXXXXXXXXXXXXS-GIVNSEFVTSHTAKWMQATDKKSPMELINEV 347 MASNLLK L R GI + V +HTAKWMQ KKSPMELI+EV Sbjct: 1 MASNLLKALIRSQILPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISEV 60 Query: 346 PPIKVDGRIVACEGDTNPALGHPIEFLCLDKDEPAICKYCGLSYVQGHHH 197 PPIKVDGRI ACEGDTNPALGHPIEF+CLD DEPAICKYCGL YVQ HHH Sbjct: 61 PPIKVDGRIAACEGDTNPALGHPIEFICLDLDEPAICKYCGLRYVQDHHH 110 >ref|NP_566191.1| NADH dehydrogenase (ubiquinone) Fe-S protein 6 [Arabidopsis thaliana] gi|75191271|sp|Q9M9M6.1|NDUS6_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial; Flags: Precursor gi|6714429|gb|AAF26117.1|AC012328_20 unknown protein [Arabidopsis thaliana] gi|11762226|gb|AAG40391.1|AF325039_1 AT3g03070 [Arabidopsis thaliana] gi|21593066|gb|AAM65015.1| unknown [Arabidopsis thaliana] gi|28416579|gb|AAO42820.1| At3g03070 [Arabidopsis thaliana] gi|110735933|dbj|BAE99941.1| hypothetical protein [Arabidopsis thaliana] gi|332640377|gb|AEE73898.1| NADH dehydrogenase (ubiquinone) Fe-S protein 6 [Arabidopsis thaliana] Length = 110 Score = 148 bits (374), Expect = 5e-34 Identities = 74/110 (67%), Positives = 79/110 (71%), Gaps = 1/110 (0%) Frame = -3 Query: 523 MASNLLKILTRXXXXXXXXXXXXXXXXS-GIVNSEFVTSHTAKWMQATDKKSPMELINEV 347 MASNLLK L R GI + V +HTAKWMQ KKSPMELI+EV Sbjct: 1 MASNLLKALIRSQILPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISEV 60 Query: 346 PPIKVDGRIVACEGDTNPALGHPIEFLCLDKDEPAICKYCGLSYVQGHHH 197 PPIKVDGRIVACEGDTNPALGHPIEF+CLD +EPAICKYCGL YVQ HHH Sbjct: 61 PPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110 >ref|XP_002520027.1| conserved hypothetical protein [Ricinus communis] gi|223540791|gb|EEF42351.1| conserved hypothetical protein [Ricinus communis] Length = 102 Score = 143 bits (360), Expect = 2e-32 Identities = 69/109 (63%), Positives = 81/109 (74%) Frame = -3 Query: 523 MASNLLKILTRXXXXXXXXXXXXXXXXSGIVNSEFVTSHTAKWMQATDKKSPMELINEVP 344 M S+LL+ LTR +V S+ +++HTAKWMQ T KKSPMELINE+P Sbjct: 1 MTSSLLRTLTRSSNFGSTTRNF------SLVTSQ-ISNHTAKWMQDTTKKSPMELINEIP 53 Query: 343 PIKVDGRIVACEGDTNPALGHPIEFLCLDKDEPAICKYCGLSYVQGHHH 197 PIKV+GRIVACEGDTNPALGHPIEF+CLD +PA+CKYCGL YVQ HHH Sbjct: 54 PIKVEGRIVACEGDTNPALGHPIEFICLDLKQPAVCKYCGLRYVQDHHH 102 >gb|AFK34710.1| unknown [Medicago truncatula] Length = 105 Score = 142 bits (359), Expect = 3e-32 Identities = 70/109 (64%), Positives = 82/109 (75%) Frame = -3 Query: 523 MASNLLKILTRXXXXXXXXXXXXXXXXSGIVNSEFVTSHTAKWMQATDKKSPMELINEVP 344 MAS++LK LTR +V S+ +++HTAKWMQ T KKSPMELINEVP Sbjct: 1 MASSILKNLTRFSSSTATTNATRSF---SLVTSQ-ISNHTAKWMQDTSKKSPMELINEVP 56 Query: 343 PIKVDGRIVACEGDTNPALGHPIEFLCLDKDEPAICKYCGLSYVQGHHH 197 PIKV+GRIVACEGDT+PALGHPIE++CLD EPA+CKYCGL YVQ HHH Sbjct: 57 PIKVEGRIVACEGDTDPALGHPIEYICLDLAEPAVCKYCGLRYVQDHHH 105 >ref|XP_004151845.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucumis sativus] gi|449517961|ref|XP_004166012.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucumis sativus] Length = 103 Score = 142 bits (358), Expect = 3e-32 Identities = 61/74 (82%), Positives = 67/74 (90%) Frame = -3 Query: 418 VTSHTAKWMQATDKKSPMELINEVPPIKVDGRIVACEGDTNPALGHPIEFLCLDKDEPAI 239 + HTAKWMQ T KKSPMELINEVPPIKV GRIVACEGD+NPALGHPIEF+CLD++EPA+ Sbjct: 30 IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAV 89 Query: 238 CKYCGLSYVQGHHH 197 CKYCGL Y QGHHH Sbjct: 90 CKYCGLRYTQGHHH 103