BLASTX nr result

ID: Panax21_contig00026889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026889
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB71560.1| COP9 complex subunit 7a [Solanum chacoense]            139   2e-31
ref|XP_002302493.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_003633897.1| PREDICTED: COP9 signalosome complex subunit ...   134   1e-29
ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit ...   134   1e-29
ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit ...   134   1e-29

>gb|AEB71560.1| COP9 complex subunit 7a [Solanum chacoense]
          Length = 247

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/86 (79%), Positives = 79/86 (91%)
 Frame = -2

Query: 259 MDIEQKQAEHVEHFVQQASTLKGSSLANVVVEATSHPFLFAFSEILALPNVLELQGTENS 80
           MDIEQKQAEH+E FV+QAS LKGS+L +V+VEATSHP LFAFSEIL++P+VLEL+GTENS
Sbjct: 1   MDIEQKQAEHIEFFVKQASALKGSALTSVIVEATSHPSLFAFSEILSVPSVLELEGTENS 60

Query: 79  VHLDLLRLFAHGTWSEYKSNADHLPQ 2
           V+LDLLRLFAHGTWS+YKS A  LPQ
Sbjct: 61  VYLDLLRLFAHGTWSDYKSIACRLPQ 86


>ref|XP_002302493.1| predicted protein [Populus trichocarpa] gi|222844219|gb|EEE81766.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/86 (73%), Positives = 77/86 (89%)
 Frame = -2

Query: 259 MDIEQKQAEHVEHFVQQASTLKGSSLANVVVEATSHPFLFAFSEILALPNVLELQGTENS 80
           MDIEQKQAE ++HFV QASTLK S+L  +++EATSHP LFAFSEIL++P V ELQGTENS
Sbjct: 1   MDIEQKQAELIDHFVNQASTLKASALWPLIIEATSHPSLFAFSEILSVPTVSELQGTENS 60

Query: 79  VHLDLLRLFAHGTWSEYKSNADHLPQ 2
           ++LD+LRLFAHGTW++YK+NA HLPQ
Sbjct: 61  LYLDVLRLFAHGTWTDYKNNAGHLPQ 86


>ref|XP_003633897.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 3 [Vitis
           vinifera]
          Length = 244

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/86 (74%), Positives = 77/86 (89%)
 Frame = -2

Query: 259 MDIEQKQAEHVEHFVQQASTLKGSSLANVVVEATSHPFLFAFSEILALPNVLELQGTENS 80
           MDIEQ+QAE ++ FV+QAST  GS+LA V+++ATSHP LFAFSEILA+PNV+EL GTENS
Sbjct: 1   MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60

Query: 79  VHLDLLRLFAHGTWSEYKSNADHLPQ 2
           V+LD+LRLFAHGTWS+YKSN D LPQ
Sbjct: 61  VYLDMLRLFAHGTWSDYKSNVDRLPQ 86


>ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 2 [Vitis
           vinifera]
          Length = 247

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/86 (74%), Positives = 77/86 (89%)
 Frame = -2

Query: 259 MDIEQKQAEHVEHFVQQASTLKGSSLANVVVEATSHPFLFAFSEILALPNVLELQGTENS 80
           MDIEQ+QAE ++ FV+QAST  GS+LA V+++ATSHP LFAFSEILA+PNV+EL GTENS
Sbjct: 1   MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60

Query: 79  VHLDLLRLFAHGTWSEYKSNADHLPQ 2
           V+LD+LRLFAHGTWS+YKSN D LPQ
Sbjct: 61  VYLDMLRLFAHGTWSDYKSNVDRLPQ 86


>ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 1 [Vitis
           vinifera] gi|297734611|emb|CBI16662.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/86 (74%), Positives = 77/86 (89%)
 Frame = -2

Query: 259 MDIEQKQAEHVEHFVQQASTLKGSSLANVVVEATSHPFLFAFSEILALPNVLELQGTENS 80
           MDIEQ+QAE ++ FV+QAST  GS+LA V+++ATSHP LFAFSEILA+PNV+EL GTENS
Sbjct: 1   MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60

Query: 79  VHLDLLRLFAHGTWSEYKSNADHLPQ 2
           V+LD+LRLFAHGTWS+YKSN D LPQ
Sbjct: 61  VYLDMLRLFAHGTWSDYKSNVDRLPQ 86


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