BLASTX nr result

ID: Panax21_contig00026878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026878
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4...   503   e-140
emb|CBI21075.3| unnamed protein product [Vitis vinifera]              480   e-133
ref|XP_002308701.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132
ref|XP_002515439.1| ubiquitin-protein ligase, putative [Ricinus ...   450   e-124
ref|XP_004167948.1| PREDICTED: U-box domain-containing protein 7...   448   e-123

>ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 497

 Score =  503 bits (1294), Expect = e-140
 Identities = 278/385 (72%), Positives = 301/385 (78%), Gaps = 10/385 (2%)
 Frame = +3

Query: 3    MKRVVKRLQCDDVL---WGAKEVRRLTKEDSEARTTLALLGAIPTLVGLLDLEDIDFQIN 173
            +KRVV+ LQ  + +    GA EVRR  KED EARTTLA+LGAIP LVG+LD ED + QI 
Sbjct: 113  VKRVVRDLQVGEGVRKSGGAVEVRRRAKEDLEARTTLAMLGAIPPLVGMLDSEDQESQIA 172

Query: 174  SLYALLNLGIGNDANKAAIVKAGAVHKMLKLIESPNEWPNRAVAEAIVANFLGLSALDLN 353
            SLYALLNLGIGND NKAAIVKAGAVHKMLKLIESPNE PN AV+EA+VANFLGLSALD N
Sbjct: 173  SLYALLNLGIGNDENKAAIVKAGAVHKMLKLIESPNELPNSAVSEAVVANFLGLSALDSN 232

Query: 354  KPIIGSSGAIPFLVKPLKDPDSNASSQAKQDSLRALYNLSILPLNILPMLETDLVPFLLS 533
            K IIGSSGA+P LV+ LK+ D  +SSQA QDSLRALYNLSILPLNI  +LETD V FLL+
Sbjct: 233  KSIIGSSGAVPILVRTLKNLDKTSSSQAMQDSLRALYNLSILPLNISVILETDFVSFLLN 292

Query: 534  SLGDMEVSERILSVLSNVVSTTEGRKAVSDVLDVFPILIDALHWTDSPACQEKVSYILMV 713
            +LGDMEVSERILS+LSNVVST EGRKA+S V D FPILID L+W DS  CQEK SYILMV
Sbjct: 293  TLGDMEVSERILSILSNVVSTPEGRKAISTVPDAFPILIDVLNWNDSTGCQEKASYILMV 352

Query: 714  MAHKSYGDRQAMAEAGIVXXXXXXXXXXXXXAQKRASRILECLRVDKGKQVSESYGGGLG 893
            MAHKSYGDRQAM +AGIV             AQKRASRILECLRVDKGKQVSESYGG LG
Sbjct: 353  MAHKSYGDRQAMIDAGIVSSLLELSLLGSTLAQKRASRILECLRVDKGKQVSESYGGSLG 412

Query: 894  GT-LSAPLCESLLSSADPNL------RNEDDMMSEEKKAVKHLVQQSLQNNMRRIAKRAN 1052
               +SAP+C S  SSADPNL        E+DMMSEEKKAVK LVQQSLQNNMRRI KRAN
Sbjct: 413  SVGVSAPICGSSSSSADPNLSSKEAFEEEEDMMSEEKKAVKQLVQQSLQNNMRRIVKRAN 472

Query: 1053 LPQDFVPSDHFXXXXXXXXXXXXPF 1127
            LPQDFVPSDHF            PF
Sbjct: 473  LPQDFVPSDHFKALTSSSTSKSLPF 497


>emb|CBI21075.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  480 bits (1236), Expect = e-133
 Identities = 266/378 (70%), Positives = 287/378 (75%), Gaps = 3/378 (0%)
 Frame = +3

Query: 3    MKRVVKRLQCDDVL---WGAKEVRRLTKEDSEARTTLALLGAIPTLVGLLDLEDIDFQIN 173
            +KRVV+ LQ  + +    GA EVRR  KED EARTTLA+LGAIP LVG+LD ED + QI 
Sbjct: 113  VKRVVRDLQVGEGVRKSGGAVEVRRRAKEDLEARTTLAMLGAIPPLVGMLDSEDQESQIA 172

Query: 174  SLYALLNLGIGNDANKAAIVKAGAVHKMLKLIESPNEWPNRAVAEAIVANFLGLSALDLN 353
            SLYALLNLGIGND NKAAIVKAGAVHKMLKLIESPNE PN AV+EA+VANFLGLSALD N
Sbjct: 173  SLYALLNLGIGNDENKAAIVKAGAVHKMLKLIESPNELPNSAVSEAVVANFLGLSALDSN 232

Query: 354  KPIIGSSGAIPFLVKPLKDPDSNASSQAKQDSLRALYNLSILPLNILPMLETDLVPFLLS 533
            K IIGSSGA+P LV+ LK+ D  +SSQA QDSLRALYNLSILPLNI  +LETD V FLL+
Sbjct: 233  KSIIGSSGAVPILVRTLKNLDKTSSSQAMQDSLRALYNLSILPLNISVILETDFVSFLLN 292

Query: 534  SLGDMEVSERILSVLSNVVSTTEGRKAVSDVLDVFPILIDALHWTDSPACQEKVSYILMV 713
            +LGDMEVSERILS+LSNVVST EGRKA+S V D FPILID L+W DS  CQEK SYILMV
Sbjct: 293  TLGDMEVSERILSILSNVVSTPEGRKAISTVPDAFPILIDVLNWNDSTGCQEKASYILMV 352

Query: 714  MAHKSYGDRQAMAEAGIVXXXXXXXXXXXXXAQKRASRILECLRVDKGKQVSESYGGGLG 893
            MAHKSYGDRQAM +AGIV             AQKRASRILECLRVDKGKQVSESYGG LG
Sbjct: 353  MAHKSYGDRQAMIDAGIVSSLLELSLLGSTLAQKRASRILECLRVDKGKQVSESYGGSLG 412

Query: 894  GTLSAPLCESLLSSADPNLRNEDDMMSEEKKAVKHLVQQSLQNNMRRIAKRANLPQDFVP 1073
                                 E+DMMSEEKKAVK LVQQSLQNNMRRI KRANLPQDFVP
Sbjct: 413  SA----------------FEEEEDMMSEEKKAVKQLVQQSLQNNMRRIVKRANLPQDFVP 456

Query: 1074 SDHFXXXXXXXXXXXXPF 1127
            SDHF            PF
Sbjct: 457  SDHFKALTSSSTSKSLPF 474


>ref|XP_002308701.1| predicted protein [Populus trichocarpa] gi|222854677|gb|EEE92224.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  478 bits (1230), Expect = e-132
 Identities = 261/384 (67%), Positives = 295/384 (76%), Gaps = 9/384 (2%)
 Frame = +3

Query: 3    MKRVVKRLQCDDVLW---GAKEVRRLTKEDSEARTTLALLGAIPTLVGLLDLEDIDFQIN 173
            MKRVV+ LQ D+ +     A  VR L KED +AR TL++LGAIP LVG+LDLED + QI+
Sbjct: 110  MKRVVRELQVDEGVKRREAACNVRLLCKEDGKARVTLSMLGAIPPLVGMLDLEDFECQID 169

Query: 174  SLYALLNLGIGNDANKAAIVKAGAVHKMLKLIESPNEWPNRAVAEAIVANFLGLSALDLN 353
            +LYALLNLGIGND NKAAIVKAGAVHKMLK+IESPN   N +V+EAIVANFLGLSALD N
Sbjct: 170  ALYALLNLGIGNDVNKAAIVKAGAVHKMLKIIESPNA-ANPSVSEAIVANFLGLSALDSN 228

Query: 354  KPIIGSSGAIPFLVKPLKDPDSNASSQAKQDSLRALYNLSILPLNILPMLETDLVPFLLS 533
            KPIIGSSGAIPFLV  LKD D    SQA+QD+LRALYNLSI P NI  +LETDL+ FL+ 
Sbjct: 229  KPIIGSSGAIPFLVNSLKDLDHKNRSQAQQDALRALYNLSISPSNISFILETDLISFLMG 288

Query: 534  SLGDMEVSERILSVLSNVVSTTEGRKAVSDVLDVFPILIDALHWTDSPACQEKVSYILMV 713
            SLGDMEVSER+LS+LSN VST EGRKA+S + D FPIL+D L+WTDSP CQEK SYILMV
Sbjct: 289  SLGDMEVSERVLSILSNAVSTPEGRKAISAMPDAFPILVDVLNWTDSPGCQEKASYILMV 348

Query: 714  MAHKSYGDRQAMAEAGIVXXXXXXXXXXXXXAQKRASRILECLRVDKGKQVSESYGGGLG 893
            MAHK+YGDRQAM EAGIV             AQKRASRILECLRVDKGKQVS +YGG +G
Sbjct: 349  MAHKAYGDRQAMIEAGIVSSLLELTLLGSTLAQKRASRILECLRVDKGKQVSGNYGGNMG 408

Query: 894  GTLSAPLCESLLSSADPN------LRNEDDMMSEEKKAVKHLVQQSLQNNMRRIAKRANL 1055
              +SAP+  +  SS++PN      L   +DMMSEEKKAVK LVQQSLQNNMRRI KRANL
Sbjct: 409  AAVSAPIYGTPSSSSNPNLVSKECLEETEDMMSEEKKAVKQLVQQSLQNNMRRIVKRANL 468

Query: 1056 PQDFVPSDHFXXXXXXXXXXXXPF 1127
            PQDFVPS+HF            PF
Sbjct: 469  PQDFVPSEHFKSLTSSSTSKSLPF 492


>ref|XP_002515439.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223545383|gb|EEF46888.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 510

 Score =  450 bits (1157), Expect = e-124
 Identities = 248/385 (64%), Positives = 283/385 (73%), Gaps = 10/385 (2%)
 Frame = +3

Query: 3    MKRVVKRLQCDDVLW----GAKEVRRLTKEDSEARTTLALLGAIPTLVGLLDLEDIDFQI 170
            +K +VK LQ ++        A  VR L KEDS  R TLALLGAIP LV ++D ++ D QI
Sbjct: 127  LKSLVKELQIENDSKRKEEAASRVRLLAKEDSGVRVTLALLGAIPPLVAMIDFDNADLQI 186

Query: 171  NSLYALLNLGIGNDANKAAIVKAGAVHKMLKLIESPNEWPNRAVAEAIVANFLGLSALDL 350
             SLYALLNL I NDANKAAIVKAGAVHKMLK+IE P   P  +V+EAIVANFLGLSALD 
Sbjct: 187  ASLYALLNLAIANDANKAAIVKAGAVHKMLKIIELPYP-PKPSVSEAIVANFLGLSALDS 245

Query: 351  NKPIIGSSGAIPFLVKPLKDPDSNASSQAKQDSLRALYNLSILPLNILPMLETDLVPFLL 530
            NKPIIGSSGAIPFLV  L+D D   S QAKQD++RALYNLSI   N+  ++E +L+PFL+
Sbjct: 246  NKPIIGSSGAIPFLVNTLRDLDHKCSIQAKQDAVRALYNLSIFSSNVSFIVEANLIPFLM 305

Query: 531  SSLGDMEVSERILSVLSNVVSTTEGRKAVSDVLDVFPILIDALHWTDSPACQEKVSYILM 710
            ++LGDMEVSERILS+LSN+VST EGRKA+S + D F ILID L+WTDSP CQEK SYILM
Sbjct: 306  NTLGDMEVSERILSILSNLVSTPEGRKAISTMRDAFTILIDVLNWTDSPGCQEKASYILM 365

Query: 711  VMAHKSYGDRQAMAEAGIVXXXXXXXXXXXXXAQKRASRILECLRVDKGKQVSESYGGGL 890
            VMAHK+YGDRQAM EAGIV             AQKRASRILECLRVDKGKQ+S+ YGG L
Sbjct: 366  VMAHKAYGDRQAMIEAGIVSALLELTLLGSTLAQKRASRILECLRVDKGKQISDHYGGNL 425

Query: 891  GGTLSAPLCESLLSSADPN------LRNEDDMMSEEKKAVKHLVQQSLQNNMRRIAKRAN 1052
            G  +SAP+  S  SSA+PN      L   +D MSEEKKAVK LVQQSLQ NM RI KRAN
Sbjct: 426  GAAVSAPIYGSSSSSANPNGVSKEFLEEAEDTMSEEKKAVKQLVQQSLQTNMMRIVKRAN 485

Query: 1053 LPQDFVPSDHFXXXXXXXXXXXXPF 1127
            LPQDFVPS+HF            PF
Sbjct: 486  LPQDFVPSEHFKSLTASSTSKSLPF 510


>ref|XP_004167948.1| PREDICTED: U-box domain-containing protein 7-like [Cucumis sativus]
          Length = 502

 Score =  448 bits (1152), Expect = e-123
 Identities = 252/383 (65%), Positives = 284/383 (74%), Gaps = 9/383 (2%)
 Frame = +3

Query: 6    KRVVKRLQCDDVLW---GAKEVRRLTKEDSEARTTLALLGAIPTLVGLLDLEDIDFQINS 176
            KRVVK+LQ +D++     A  VR L KED+EAR TL +LGAIP LVG+LDLED + +I S
Sbjct: 125  KRVVKKLQDEDLVERRAAASGVRLLAKEDTEARGTLGMLGAIPPLVGMLDLEDDESKIAS 184

Query: 177  LYALLNLGIGNDANKAAIVKAGAVHKMLKLIESPNEWPNRAVAEAIVANFLGLSALDLNK 356
            LYALLNLGIGND NKAAI KAG +HKMLKLIES    PN  V+EAIVANFLGLSALD NK
Sbjct: 185  LYALLNLGIGNDLNKAAIAKAGTIHKMLKLIESETS-PNPPVSEAIVANFLGLSALDTNK 243

Query: 357  PIIGSSGAIPFLVKPLKDPDSNASSQAKQDSLRALYNLSILPLNILPMLETDLVPFLLSS 536
             +IGSSGAIPFLVK L DP   +SSQ KQD+LRALYNLSI P NI  +LET LVPFLL++
Sbjct: 244  LLIGSSGAIPFLVKNLYDPHQESSSQVKQDALRALYNLSIFPSNIPFILETKLVPFLLNA 303

Query: 537  LGDMEVSERILSVLSNVVSTTEGRKAVSDVLDVFPILIDALHWTDSPACQEKVSYILMVM 716
            LGDMEVSER LSVLSNV+ST++GRKA+S   + FPILID L+W DSP CQEK SYILMVM
Sbjct: 304  LGDMEVSERALSVLSNVISTSDGRKAISTYPNSFPILIDVLNWADSPGCQEKASYILMVM 363

Query: 717  AHKSYGDRQAMAEAGIVXXXXXXXXXXXXXAQKRASRILECLRVDKGKQVSESYGGGLGG 896
            AHKSY DRQAM EAGI              AQKRASR+LE LRVDKGKQ+S+     LGG
Sbjct: 364  AHKSYSDRQAMIEAGISSALLELTLLGSTLAQKRASRVLESLRVDKGKQISDH----LGG 419

Query: 897  TLSAPLCESLLSSADP------NLRNEDDMMSEEKKAVKHLVQQSLQNNMRRIAKRANLP 1058
              SAP+C SL S  +P       L   DD++SEEKKAVK LV+QSLQNNMRRI KRANLP
Sbjct: 420  NSSAPMCGSLTSFTNPILGSAEALEGSDDLVSEEKKAVKQLVRQSLQNNMRRIVKRANLP 479

Query: 1059 QDFVPSDHFXXXXXXXXXXXXPF 1127
            QDFVPSD+F            PF
Sbjct: 480  QDFVPSDNFKSLTSSSTSKSLPF 502


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