BLASTX nr result

ID: Panax21_contig00026874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026874
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64677.1| hypothetical protein VITISV_024917 [Vitis vinifera]   451   e-124
ref|XP_002528905.1| tRNA-dihydrouridine synthase, putative [Rici...   447   e-123
ref|XP_004160928.1| PREDICTED: tRNA-dihydrouridine(20) synthase ...   439   e-121
ref|XP_004143428.1| PREDICTED: tRNA-dihydrouridine(20) synthase ...   439   e-121
ref|XP_003516878.1| PREDICTED: tRNA-dihydrouridine synthase 2-li...   426   e-117

>emb|CAN64677.1| hypothetical protein VITISV_024917 [Vitis vinifera]
          Length = 326

 Score =  451 bits (1160), Expect = e-124
 Identities = 226/268 (84%), Positives = 248/268 (92%)
 Frame = +3

Query: 6   LGSVDFIEKGTEAVVFRTCDEERSRVVFQMGTSDAVRALAAAQIVCKDVAAVDINMGCPK 185
           +GS+DF+EKGT  VVFRTC EE++RVVFQMGTS+A RAL AAQIVCKDVAAVDINMGCPK
Sbjct: 53  IGSIDFVEKGTHNVVFRTCHEEKNRVVFQMGTSNAERALTAAQIVCKDVAAVDINMGCPK 112

Query: 186 SFSISGGMGAALLTKPELIHDILTTLKRNLDIPITCKIRLLKSSQDTVDLARRIEKTGVS 365
           SFSISGGMGAALLT+PELIHDILT LKRNLDIP+TCKIRLLKSSQ+TV+LA++IEKTGV+
Sbjct: 113 SFSISGGMGAALLTRPELIHDILTILKRNLDIPVTCKIRLLKSSQETVELAQQIEKTGVA 172

Query: 366 ALAVHGRRVADRPRDPAKWSEIADVVAALSIPVIANGNVFEYEDFQRIKDTTGASSVMVA 545
           ALAVHGRR+ADRPRDPAKW+EIADVVAALSIPVIANG+VF Y+DFQRIK  TGASSVMVA
Sbjct: 173 ALAVHGRRIADRPRDPAKWNEIADVVAALSIPVIANGDVFGYDDFQRIKVATGASSVMVA 232

Query: 546 RGALWNASVFSPEGKVPREDVKREYVRKSILWDNDIRSSKHTLKEMITTHASLGLPEGMA 725
           RGALWNASVFSPEGKVP EDVK EY+RKSILWDNDI+S+KHTLKEMI  H+ L LPEG A
Sbjct: 233 RGALWNASVFSPEGKVPWEDVKXEYIRKSILWDNDIKSTKHTLKEMIMHHSCLELPEGKA 292

Query: 726 VIKSETLADLALLYGEEKYYAFVNESRL 809
           VIKSETLADLA LYGEEKYY FV  +RL
Sbjct: 293 VIKSETLADLAKLYGEEKYYQFVRGNRL 320


>ref|XP_002528905.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
           gi|223531659|gb|EEF33485.1| tRNA-dihydrouridine
           synthase, putative [Ricinus communis]
          Length = 330

 Score =  447 bits (1149), Expect = e-123
 Identities = 221/268 (82%), Positives = 245/268 (91%)
 Frame = +3

Query: 6   LGSVDFIEKGTEAVVFRTCDEERSRVVFQMGTSDAVRALAAAQIVCKDVAAVDINMGCPK 185
           +G  DF+EKGTE VVFRTC+EE++RVVFQMGTSDAVRAL AAQ+VCKDVAA+DINMGCPK
Sbjct: 53  IGCTDFVEKGTENVVFRTCNEEKNRVVFQMGTSDAVRALTAAQMVCKDVAAIDINMGCPK 112

Query: 186 SFSISGGMGAALLTKPELIHDILTTLKRNLDIPITCKIRLLKSSQDTVDLARRIEKTGVS 365
           SFSISGGMGAALLTKPELIHDILTTLKRNLD P+TCKIRLLKS QDTV+LARRIEKTGVS
Sbjct: 113 SFSISGGMGAALLTKPELIHDILTTLKRNLDSPVTCKIRLLKSPQDTVELARRIEKTGVS 172

Query: 366 ALAVHGRRVADRPRDPAKWSEIADVVAALSIPVIANGNVFEYEDFQRIKDTTGASSVMVA 545
           ALAVHGR+VADRPRDPAKWSEIAD+V+ LSIPVIANG+VF+Y DF+RIK  TGASSVMVA
Sbjct: 173 ALAVHGRKVADRPRDPAKWSEIADIVSTLSIPVIANGDVFDYGDFERIKAATGASSVMVA 232

Query: 546 RGALWNASVFSPEGKVPREDVKREYVRKSILWDNDIRSSKHTLKEMITTHASLGLPEGMA 725
           RGALWNAS+FSP+GKV  EDVKREYVRKSILWDND++S+KHTLKEMI  ++ L LPEG  
Sbjct: 233 RGALWNASIFSPKGKVHWEDVKREYVRKSILWDNDVKSTKHTLKEMIMHYSCLELPEGKG 292

Query: 726 VIKSETLADLALLYGEEKYYAFVNESRL 809
           VIKSETLAD+A  YGEE+YY  VNE RL
Sbjct: 293 VIKSETLADIAKFYGEERYYQLVNEKRL 320


>ref|XP_004160928.1| PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Cucumis
           sativus]
          Length = 325

 Score =  439 bits (1130), Expect = e-121
 Identities = 220/273 (80%), Positives = 245/273 (89%)
 Frame = +3

Query: 6   LGSVDFIEKGTEAVVFRTCDEERSRVVFQMGTSDAVRALAAAQIVCKDVAAVDINMGCPK 185
           +GS DF+EKGT  VVFRTC  ER  VVFQMGTS+A RAL+AAQ+VC+DVAA+DINMGCPK
Sbjct: 53  VGSTDFVEKGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCQDVAAIDINMGCPK 112

Query: 186 SFSISGGMGAALLTKPELIHDILTTLKRNLDIPITCKIRLLKSSQDTVDLARRIEKTGVS 365
           SFSISGGMGAALL KP+LIHDILTTL+RNL+I ITCKIRLL S QDTV+LARRIE TGVS
Sbjct: 113 SFSISGGMGAALLNKPDLIHDILTTLRRNLNILITCKIRLLNSPQDTVELARRIESTGVS 172

Query: 366 ALAVHGRRVADRPRDPAKWSEIADVVAALSIPVIANGNVFEYEDFQRIKDTTGASSVMVA 545
           AL VHGRRVADRPRDPAKWSEIADVVAAL+IPVIANG++FEY+DFQRIK  TGASS+MVA
Sbjct: 173 ALGVHGRRVADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSMMVA 232

Query: 546 RGALWNASVFSPEGKVPREDVKREYVRKSILWDNDIRSSKHTLKEMITTHASLGLPEGMA 725
           RGALWNAS+FSPEGK+P EDVKREYVRKSILWDNDI+S+K+TLKEMI  H+ L LPEG A
Sbjct: 233 RGALWNASIFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKA 292

Query: 726 VIKSETLADLALLYGEEKYYAFVNESRLFGRNR 824
           VIKSE+LADLA LYGEEKYY FV E+R F  +R
Sbjct: 293 VIKSESLADLAKLYGEEKYYQFVQENRSFNESR 325


>ref|XP_004143428.1| PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Cucumis
           sativus]
          Length = 325

 Score =  439 bits (1130), Expect = e-121
 Identities = 220/273 (80%), Positives = 245/273 (89%)
 Frame = +3

Query: 6   LGSVDFIEKGTEAVVFRTCDEERSRVVFQMGTSDAVRALAAAQIVCKDVAAVDINMGCPK 185
           +GS DF+EKGT  VVFRTC  ER  VVFQMGTS+A RAL+AAQ+VC+DVAA+DINMGCPK
Sbjct: 53  VGSTDFVEKGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCQDVAAIDINMGCPK 112

Query: 186 SFSISGGMGAALLTKPELIHDILTTLKRNLDIPITCKIRLLKSSQDTVDLARRIEKTGVS 365
           SFSISGGMGAALL KP+LIHDILTTL+RNL+I ITCKIRLL S QDTV+LARRIE TGVS
Sbjct: 113 SFSISGGMGAALLNKPDLIHDILTTLRRNLNILITCKIRLLNSPQDTVELARRIESTGVS 172

Query: 366 ALAVHGRRVADRPRDPAKWSEIADVVAALSIPVIANGNVFEYEDFQRIKDTTGASSVMVA 545
           AL VHGRRVADRPRDPAKWSEIADVVAAL+IPVIANG++FEY+DFQRIK  TGASS+MVA
Sbjct: 173 ALGVHGRRVADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSMMVA 232

Query: 546 RGALWNASVFSPEGKVPREDVKREYVRKSILWDNDIRSSKHTLKEMITTHASLGLPEGMA 725
           RGALWNAS+FSPEGK+P EDVKREYVRKSILWDNDI+S+K+TLKEMI  H+ L LPEG A
Sbjct: 233 RGALWNASIFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKA 292

Query: 726 VIKSETLADLALLYGEEKYYAFVNESRLFGRNR 824
           VIKSE+LADLA LYGEEKYY FV E+R F  +R
Sbjct: 293 VIKSESLADLAKLYGEEKYYQFVQENRSFNESR 325


>ref|XP_003516878.1| PREDICTED: tRNA-dihydrouridine synthase 2-like isoform 1 [Glycine
           max]
          Length = 320

 Score =  426 bits (1094), Expect = e-117
 Identities = 209/264 (79%), Positives = 239/264 (90%)
 Frame = +3

Query: 3   VLGSVDFIEKGTEAVVFRTCDEERSRVVFQMGTSDAVRALAAAQIVCKDVAAVDINMGCP 182
           ++GS DF+EKGT+ VVFRTCDEE+  VVFQ+GTSDAVRALA AQ+VC DVAAVDINMGCP
Sbjct: 52  LIGSTDFVEKGTKNVVFRTCDEEKDTVVFQIGTSDAVRALATAQLVCNDVAAVDINMGCP 111

Query: 183 KSFSISGGMGAALLTKPELIHDILTTLKRNLDIPITCKIRLLKSSQDTVDLARRIEKTGV 362
           KSFS+SGGMGAALL+KPELIHDILTTL+RNL+ P+TCKIRLLKS  DTV+LARRIEKTGV
Sbjct: 112 KSFSVSGGMGAALLSKPELIHDILTTLRRNLNTPVTCKIRLLKSPHDTVELARRIEKTGV 171

Query: 363 SALAVHGRRVADRPRDPAKWSEIADVVAALSIPVIANGNVFEYEDFQRIKDTTGASSVMV 542
           SALAVHGR+V DRPRDPAKW+EIADVV+ALSIPVIANG+VFEY+DF+RIK  TGASSVMV
Sbjct: 172 SALAVHGRKVPDRPRDPAKWNEIADVVSALSIPVIANGDVFEYDDFERIKSATGASSVMV 231

Query: 543 ARGALWNASVFSPEGKVPREDVKREYVRKSILWDNDIRSSKHTLKEMITTHASLGLPEGM 722
           ARGALWNAS+FSPEGKV  E VKREY+RK ILWDND++S+KHTLKEMI  ++ L LPEG 
Sbjct: 232 ARGALWNASMFSPEGKVSYEAVKREYIRKCILWDNDLKSTKHTLKEMIMHYSCLELPEGK 291

Query: 723 AVIKSETLADLALLYGEEKYYAFV 794
           AVIKSE++ADLA LYG+ +YY  V
Sbjct: 292 AVIKSESMADLAELYGQREYYQLV 315


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