BLASTX nr result

ID: Panax21_contig00026865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026865
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300985.1| predicted protein [Populus trichocarpa] gi|2...   129   4e-28
ref|XP_002285858.1| PREDICTED: uncharacterized protein LOC100262...   124   1e-26
ref|XP_002513756.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_002891289.1| hypothetical protein ARALYDRAFT_891393 [Arab...   114   1e-23
ref|NP_175087.1| uncharacterized protein [Arabidopsis thaliana] ...   114   1e-23

>ref|XP_002300985.1| predicted protein [Populus trichocarpa] gi|222842711|gb|EEE80258.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  129 bits (324), Expect = 4e-28
 Identities = 60/105 (57%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
 Frame = -1

Query: 595 IEQQVSQVLKKGARKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCNNCN----X 428
           +EQQV QVLK GA +CI C S ADLV+Y+KVLKLFF+PVW+WPGK+  MHCNNCN     
Sbjct: 9   VEQQVRQVLKSGAGRCIRCASKADLVEYEKVLKLFFIPVWKWPGKEPAMHCNNCNLIFPQ 68

Query: 427 XXXXXXXXXXXXXXXLVVPDVLRCQYCAREVDSEFKFCPFCGSAL 293
                           VV + LRC +C R V+SEFKFCPFCGS+L
Sbjct: 69  SFSHTPPKSDYSLPRSVVTESLRCHFCDRVVESEFKFCPFCGSSL 113


>ref|XP_002285858.1| PREDICTED: uncharacterized protein LOC100262547 [Vitis vinifera]
          Length = 102

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/101 (60%), Positives = 68/101 (67%)
 Frame = -1

Query: 595 IEQQVSQVLKKGARKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCNNCNXXXXX 416
           +EQQV QVLK GA KCINC S ADLV Y+KVLKLFFVPVWRWPGK+ LMHC +C      
Sbjct: 9   LEQQVLQVLKSGAGKCINCGSRADLVDYEKVLKLFFVPVWRWPGKEPLMHCPDC------ 62

Query: 415 XXXXXXXXXXXLVVPDVLRCQYCAREVDSEFKFCPFCGSAL 293
                        + DVLRC  C R V+S F+FCPFCGSAL
Sbjct: 63  -FLFFPPPTRTGPLLDVLRCASCGRPVESNFRFCPFCGSAL 102


>ref|XP_002513756.1| conserved hypothetical protein [Ricinus communis]
           gi|223546842|gb|EEF48339.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score =  117 bits (294), Expect = 1e-24
 Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
 Frame = -1

Query: 595 IEQQVSQVLKKGARKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCNNCN---XX 425
           +EQQVS+VLK G  +C+NC S ADLV+Y+KVLKLFF+PV++WPGK+  M+CNNCN     
Sbjct: 9   VEQQVSRVLKSGVGRCVNCGSMADLVEYEKVLKLFFIPVYKWPGKEPAMYCNNCNLMFPR 68

Query: 424 XXXXXXXXXXXXXXLVVPDVLRCQYCAREVDSEFKFCPFCGSAL 293
                           V D LRC +C R  + EF+FCPFCG++L
Sbjct: 69  SFSFPPPRTDSVSPSAVSDGLRCHFCDRVAEPEFRFCPFCGNSL 112


>ref|XP_002891289.1| hypothetical protein ARALYDRAFT_891393 [Arabidopsis lyrata subsp.
           lyrata] gi|297337131|gb|EFH67548.1| hypothetical protein
           ARALYDRAFT_891393 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score =  114 bits (285), Expect = 1e-23
 Identities = 53/101 (52%), Positives = 64/101 (63%)
 Frame = -1

Query: 595 IEQQVSQVLKKGARKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCNNCNXXXXX 416
           + QQV QVLK GA  CI C S ADLV YDKVLKLFF+PVWRWPGKD L+HC +C+     
Sbjct: 9   VGQQVRQVLKSGAGTCIRCGSEADLVDYDKVLKLFFIPVWRWPGKDPLLHCRDCDLFFPQ 68

Query: 415 XXXXXXXXXXXLVVPDVLRCQYCAREVDSEFKFCPFCGSAL 293
                           +  C++C R V+ EF+FCPFCGS+L
Sbjct: 69  SLSPPPV--------SLATCRFCDRVVEPEFRFCPFCGSSL 101


>ref|NP_175087.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13876513|gb|AAK43489.1|AC084807_14 hypothetical
           protein [Arabidopsis thaliana]
           gi|44917499|gb|AAS49074.1| At1g44414 [Arabidopsis
           thaliana] gi|332193912|gb|AEE32033.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 101

 Score =  114 bits (285), Expect = 1e-23
 Identities = 53/99 (53%), Positives = 64/99 (64%)
 Frame = -1

Query: 589 QQVSQVLKKGARKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCNNCNXXXXXXX 410
           QQV QVLK GA  CI C S ADLV+YDKV+KLFFVPVWRWPGKD L+HC +C+       
Sbjct: 11  QQVRQVLKSGAGTCIRCGSQADLVEYDKVIKLFFVPVWRWPGKDPLLHCRDCDLFFPQSL 70

Query: 409 XXXXXXXXXLVVPDVLRCQYCAREVDSEFKFCPFCGSAL 293
                         +  C++C R V+ EF+FCPFCGS+L
Sbjct: 71  SPPPV--------SLATCRFCDRVVEPEFRFCPFCGSSL 101


Top