BLASTX nr result

ID: Panax21_contig00026861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026861
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...   234   8e-60
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   229   3e-58
ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin...   227   1e-57
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   227   1e-57
ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|2...   226   3e-57

>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  234 bits (598), Expect = 8e-60
 Identities = 119/218 (54%), Positives = 132/218 (60%), Gaps = 1/218 (0%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKFGASCKYHHP+QGGGSAS V+LN  GYPLR GE+EC+YY+KTGQCKFG TCKFHHPQP
Sbjct: 108 CKFGASCKYHHPKQGGGSASPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQP 167

Query: 182 TGIQXXXXXXXXXXXXXXXXXXXXXXQSP-VHSSQQYGVVAGNWPVVRPALLPGSYFPGT 358
             IQ                      QSP V SSQQYGV+     V RP LLPGSY  G 
Sbjct: 168 GNIQIPAQSLAPQIAPVPGPTLYPSVQSPSVPSSQQYGVM-----VARPPLLPGSYVQGP 222

Query: 359 YGSXXXXXXXXXXXXWNPYQAPMSPVASPSGQSTVGAGPMYGITQLXXXXXXXXXXXXXX 538
           YG             WNPY AP+SPVASP+ Q  VG+G +YG++ L              
Sbjct: 223 YGPVLLSPSVVPYPSWNPYPAPVSPVASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSI 282

Query: 539 XXXXXXXXXXQKEHAFPERPGQPECQYYLKTGDCKFGS 652
                     QKEH FPERPGQPECQYY+KTGDCKF S
Sbjct: 283 PPATGPSSSTQKEHLFPERPGQPECQYYIKTGDCKFRS 320



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/61 (54%), Positives = 40/61 (65%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKF +SC+YHHP +   S S+V L+  G PLR G   CS+Y + GQCKFG  CKF HP  
Sbjct: 316 CKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYTQRGQCKFGPACKFDHPMG 375

Query: 182 T 184
           T
Sbjct: 376 T 376


>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
           vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  229 bits (585), Expect = 3e-58
 Identities = 119/218 (54%), Positives = 128/218 (58%), Gaps = 1/218 (0%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKFGASCKYHHPRQGGG+ S V LN  GYPLR GEKECSYY+KTG CKFG TCKFHHPQP
Sbjct: 110 CKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQP 169

Query: 182 TGIQXXXXXXXXXXXXXXXXXXXXXXQSP-VHSSQQYGVVAGNWPVVRPALLPGSYFPGT 358
             IQ                      QSP V SSQQYG+V     V RP LLP SYF G 
Sbjct: 170 DSIQLSTPGPAALPAPVPAHTLYPTVQSPSVPSSQQYGLV-----VARPPLLPSSYFHGP 224

Query: 359 YGSXXXXXXXXXXXXWNPYQAPMSPVASPSGQSTVGAGPMYGITQLXXXXXXXXXXXXXX 538
           Y              W+ Y AP+SPVASPS Q TVG+G MYG+T L              
Sbjct: 225 YSPVLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPL 284

Query: 539 XXXXXXXXXXQKEHAFPERPGQPECQYYLKTGDCKFGS 652
                     QKE  FPERPGQPECQYY++TGDCKFGS
Sbjct: 285 PSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKFGS 322



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKFG+SCKYHHP +     ++  L+  G PLR G  +C++Y + G CKFG TCKF HP  
Sbjct: 318 CKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMG 377

Query: 182 T 184
           T
Sbjct: 378 T 378



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = +2

Query: 35  PRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHP 175
           P   G S+SS    I  +P R G+ EC YYM+TG CKFG +CK+HHP
Sbjct: 285 PSSVGPSSSSQKEQI--FPERPGQPECQYYMRTGDCKFGSSCKYHHP 329


>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
           [Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
           protein product [Vitis vinifera]
          Length = 475

 Score =  227 bits (579), Expect = 1e-57
 Identities = 115/218 (52%), Positives = 129/218 (59%), Gaps = 1/218 (0%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKFGASC++HHPR GGGS S V+LNI GYPLR+GEKECSYY+KTGQCKFGITCKFHHPQP
Sbjct: 108 CKFGASCRFHHPRNGGGSMSHVSLNIYGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQP 167

Query: 182 TGIQXXXXXXXXXXXXXXXXXXXXXXQSP-VHSSQQYGVVAGNWPVVRPALLPGSYFPGT 358
            G                        QSP V +  QYG  + +W V RP +LPGSY  G 
Sbjct: 168 AGTS----------LPASAPTFYPTVQSPSVPTPTQYGGTSTSWRVPRPPVLPGSYVQGP 217

Query: 359 YGSXXXXXXXXXXXXWNPYQAPMSPVASPSGQSTVGAGPMYGITQLXXXXXXXXXXXXXX 538
           YG             W+PY  P+SPV SP  Q TVGAG +YG+TQL              
Sbjct: 218 YGPVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPTVGAGSVYGVTQL-PSTHTLAGPYASL 276

Query: 539 XXXXXXXXXXQKEHAFPERPGQPECQYYLKTGDCKFGS 652
                     QKE  FPERPGQ ECQYYL+TGDCKFGS
Sbjct: 277 PSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCKFGS 314



 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 30/58 (51%), Positives = 41/58 (70%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHP 175
           CKFG+SC+YHHPR+     ++  L+  G PLR G + C++Y++ G CKFG TCKF HP
Sbjct: 310 CKFGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHP 367


>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  227 bits (579), Expect = 1e-57
 Identities = 119/218 (54%), Positives = 128/218 (58%), Gaps = 1/218 (0%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKFGASCKYHHPRQGGG+ S V LN  GYPLR GEKECSYY+KTG CKFG TCKFHHPQP
Sbjct: 150 CKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQP 209

Query: 182 TGIQXXXXXXXXXXXXXXXXXXXXXXQSP-VHSSQQYGVVAGNWPVVRPALLPGSYFPGT 358
             IQ                      QSP V SSQQYG+V     V RP LLP SY  G 
Sbjct: 210 DSIQLSTPGPAALPAPVPAHTLYPXVQSPSVPSSQQYGLV-----VARPPLLPSSYIHGP 264

Query: 359 YGSXXXXXXXXXXXXWNPYQAPMSPVASPSGQSTVGAGPMYGITQLXXXXXXXXXXXXXX 538
           Y              W+ Y AP+SPVASPS Q TVG+G MYG+T L              
Sbjct: 265 YSPVLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPL 324

Query: 539 XXXXXXXXXXQKEHAFPERPGQPECQYYLKTGDCKFGS 652
                     QKE  FPERPGQPECQYY++TGDCKFGS
Sbjct: 325 PSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKFGS 362



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKFG+SCKYHHP +     ++  L+  G PLR G  +C++Y + G CKFG TCKF HP  
Sbjct: 358 CKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMG 417

Query: 182 T 184
           T
Sbjct: 418 T 418



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = +2

Query: 35  PRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHP 175
           P   G S+SS    I  +P R G+ EC YYM+TG CKFG +CK+HHP
Sbjct: 325 PSSVGPSSSSQKEQI--FPERPGQPECQYYMRTGDCKFGSSCKYHHP 369


>ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|222863502|gb|EEF00633.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  226 bits (576), Expect = 3e-57
 Identities = 114/218 (52%), Positives = 129/218 (59%), Gaps = 1/218 (0%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKFGASCKY+HP+QGG S   V+LN  GYPLR GE+EC+YY+KTGQCKFG TCKFHHPQP
Sbjct: 108 CKFGASCKYNHPKQGGSSVRPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQP 167

Query: 182 TGIQXXXXXXXXXXXXXXXXXXXXXXQSP-VHSSQQYGVVAGNWPVVRPALLPGSYFPGT 358
             +Q                      QSP V SSQQYGV+     V RP LLPGSY  G 
Sbjct: 168 ANMQIPAQSLAPQVASVPAHTLYPTMQSPSVPSSQQYGVM-----VARPPLLPGSYVQGP 222

Query: 359 YGSXXXXXXXXXXXXWNPYQAPMSPVASPSGQSTVGAGPMYGITQLXXXXXXXXXXXXXX 538
           YG             W+PY AP+SPVASP+ Q  VG+G +YGI+ L              
Sbjct: 223 YGPVLLSPSLVPYPSWSPYPAPVSPVASPNAQPAVGSGSVYGISPLSPSAPAYTGAYQSI 282

Query: 539 XXXXXXXXXXQKEHAFPERPGQPECQYYLKTGDCKFGS 652
                     QKEH FPERPGQPECQYY+KTGDCKF S
Sbjct: 283 PTAKGPSSSSQKEHVFPERPGQPECQYYMKTGDCKFES 320



 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = +2

Query: 2   CKFGASCKYHHPRQGGGSASSVALNISGYPLRMGEKECSYYMKTGQCKFGITCKFHHPQP 181
           CKF +SC+YHHP +   S ++V L+  G PLR G   C++Y + GQCKFG  CKF HP  
Sbjct: 316 CKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYTQHGQCKFGPACKFDHPMG 375

Query: 182 T 184
           T
Sbjct: 376 T 376


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