BLASTX nr result
ID: Panax21_contig00026852
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00026852
(837 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera] 360 2e-97
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat... 360 3e-97
ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|2... 347 1e-93
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,... 327 2e-87
ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat... 303 2e-80
>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 360 bits (924), Expect = 2e-97
Identities = 175/250 (70%), Positives = 208/250 (83%)
Frame = +1
Query: 88 VLPKELCCHILDECANITALKKIHSKIILQQNLNSNSSIGIKLMRAYSAFGQPGITRHIF 267
VL + LC ILD+ +I LKK+HSKI + +L+SN S+GIKLMRAY+ G+P TRHIF
Sbjct: 1024 VLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIF 1083
Query: 268 DEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGSASLW 447
DE+ KNV FFNVMIRSYV NH Y DAL+V+KNMA H I PDHYTYPCVLKA SGS LW
Sbjct: 1084 DEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLW 1143
Query: 448 VGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLVAGYA 627
VG+QIHA+VV+VGLDLN+F+GNGLIS+YGKCG L+EACRV D+MP RDVVSWNSLVAG A
Sbjct: 1144 VGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCA 1203
Query: 628 QNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTNTSRNNVMAVNDMFINHANESLVSW 807
+NG+FDDALEVC+ M+ G++PD+GTMASLLPAVTNT +NV V +MF+ AN+SLVSW
Sbjct: 1204 RNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSW 1263
Query: 808 NVMIAVYVNN 837
NVMIAVY+NN
Sbjct: 1264 NVMIAVYMNN 1273
Score = 112 bits (280), Expect = 1e-22
Identities = 59/160 (36%), Positives = 93/160 (58%)
Frame = +1
Query: 256 RHIFDEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGS 435
+ +F ++ +K++ +NVMI Y+ N +A+ ++ M H++ PD + VL AC
Sbjct: 1249 KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDL 1308
Query: 436 ASLWVGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLV 615
++L +G +IH VV+ L NL + N LI +Y KCG L A V D+M RDVVSW S++
Sbjct: 1309 SALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMI 1368
Query: 616 AGYAQNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTN 735
+ Y NG+ DA+ + MQ G+ PDS S+L A ++
Sbjct: 1369 SAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 1408
>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 360 bits (923), Expect = 3e-97
Identities = 175/252 (69%), Positives = 209/252 (82%)
Frame = +1
Query: 82 DTVLPKELCCHILDECANITALKKIHSKIILQQNLNSNSSIGIKLMRAYSAFGQPGITRH 261
+ VL + LC ILD+ +I LKK+HSKI + +L+SN S+GIKLMRAY+ G+P TRH
Sbjct: 33 NVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRH 92
Query: 262 IFDEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGSAS 441
IFDE+ KNV FFNVMIRSYV NH Y DAL+V+KNMA H I PDHYTYPCVLKA SGS
Sbjct: 93 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 152
Query: 442 LWVGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLVAG 621
LWVG+QIHA+VV+VGLDLN+F+GNGLIS+YGKCG L+EACRV D+MP RDVVSWNSLVAG
Sbjct: 153 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAG 212
Query: 622 YAQNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTNTSRNNVMAVNDMFINHANESLV 801
A+NG+FDDALEVC+ M+ G++PD+GTMASLLPAVTNT +NV V +MF+ AN+SLV
Sbjct: 213 CARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLV 272
Query: 802 SWNVMIAVYVNN 837
SWNVMIAVY+NN
Sbjct: 273 SWNVMIAVYMNN 284
Score = 112 bits (280), Expect = 1e-22
Identities = 59/160 (36%), Positives = 93/160 (58%)
Frame = +1
Query: 256 RHIFDEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGS 435
+ +F ++ +K++ +NVMI Y+ N +A+ ++ M H++ PD + VL AC
Sbjct: 260 KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDL 319
Query: 436 ASLWVGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLV 615
++L +G +IH VV+ L NL + N LI +Y KCG L A V D+M RDVVSW S++
Sbjct: 320 SALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMI 379
Query: 616 AGYAQNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTN 735
+ Y NG+ DA+ + MQ G+ PDS S+L A ++
Sbjct: 380 SAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 419
>ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|222871435|gb|EEF08566.1|
predicted protein [Populus trichocarpa]
Length = 677
Score = 347 bits (891), Expect = 1e-93
Identities = 167/251 (66%), Positives = 204/251 (81%)
Frame = +1
Query: 85 TVLPKELCCHILDECANITALKKIHSKIILQQNLNSNSSIGIKLMRAYSAFGQPGITRHI 264
T L ++LC ILD + LKK+HSKI++ QNL+ N S+GIKLMRAY+A G+P TRHI
Sbjct: 34 TALTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHI 93
Query: 265 FDEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGSASL 444
FDE+ DKNV FFNVMIRSYV N YQDAL+V+K MA +PD+YTYPCVLKACS S +L
Sbjct: 94 FDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNL 153
Query: 445 WVGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLVAGY 624
WVGLQIH +VVK+GLD+NL+IGNGL+S+YGKC +L A RV DEMP RD+VSWNS+VAGY
Sbjct: 154 WVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGY 213
Query: 625 AQNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTNTSRNNVMAVNDMFINHANESLVS 804
AQNGRF+DAL++CR M+ ++PD+GTM SLLPAVTNTS +NV+ V DMF+ +SL+S
Sbjct: 214 AQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLIS 273
Query: 805 WNVMIAVYVNN 837
WNVMIAVYVNN
Sbjct: 274 WNVMIAVYVNN 284
Score = 103 bits (256), Expect = 6e-20
Identities = 57/160 (35%), Positives = 90/160 (56%)
Frame = +1
Query: 256 RHIFDEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGS 435
+ +F ++ +K++ +NVMI YV N +A+ +Y M H + PD + VL AC
Sbjct: 260 KDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDL 319
Query: 436 ASLWVGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLV 615
++ +G +IH V + L NL + N LI +Y KCG L EA V D+M RDVVSW S++
Sbjct: 320 SAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMI 379
Query: 616 AGYAQNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTN 735
+ Y +G+ DA+ + + M+ G PD S+L A ++
Sbjct: 380 SAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSH 419
>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 660
Score = 327 bits (839), Expect = 2e-87
Identities = 156/247 (63%), Positives = 196/247 (79%)
Frame = +1
Query: 97 KELCCHILDECANITALKKIHSKIILQQNLNSNSSIGIKLMRAYSAFGQPGITRHIFDEM 276
++LC ILD+ +I LKK+H K++ Q L N S+GIKLMR Y+A G+PG+ RHIFDE+
Sbjct: 21 EDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEI 80
Query: 277 LDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGSASLWVGL 456
DKNV FFNVMIRSYV NH Y+DAL+VYK M T PD YTYPCVLKA S S SLWVGL
Sbjct: 81 TDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGL 140
Query: 457 QIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLVAGYAQNG 636
QIH +V+K+GLDLNL++GNGLI++YGKC L EA +V DE+P RDVVSWNS+V+ YAQNG
Sbjct: 141 QIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNG 200
Query: 637 RFDDALEVCRNMQTFGVEPDSGTMASLLPAVTNTSRNNVMAVNDMFINHANESLVSWNVM 816
RF+DALE+CR M+ ++P+ TMASLLPAVTNT+ +NV+ V +MF+ +S++SWNVM
Sbjct: 201 RFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVM 260
Query: 817 IAVYVNN 837
IA+YVNN
Sbjct: 261 IAMYVNN 267
Score = 99.8 bits (247), Expect = 7e-19
Identities = 56/160 (35%), Positives = 91/160 (56%)
Frame = +1
Query: 256 RHIFDEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGS 435
+ +F ++ K+V +NVMI YV N ++A+V+Y M + + PD + VL A
Sbjct: 243 KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDL 302
Query: 436 ASLWVGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLV 615
++L +G ++H + L NL + N LI +Y KCG L +A V ++M RDVVSW S++
Sbjct: 303 SALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSII 362
Query: 616 AGYAQNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTN 735
+ Y + G+ DA+ V M+ G+ PDS S+L A ++
Sbjct: 363 SAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSH 402
>ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 303 bits (777), Expect = 2e-80
Identities = 149/250 (59%), Positives = 193/250 (77%)
Frame = +1
Query: 88 VLPKELCCHILDECANITALKKIHSKIILQQNLNSNSSIGIKLMRAYSAFGQPGITRHIF 267
VL EL +LD+ +I LK +HSK+ + + N S+GIKLMRAY+A G+PG+ R++F
Sbjct: 32 VLVLELLGKVLDQYPDIKTLKNVHSKVF-NLSFHENPSLGIKLMRAYAARGEPGLARNVF 90
Query: 268 DEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGSASLW 447
D + ++NV F+NVMIRSY+ NH Y DAL+V+++M + PDHYTYPCVLKACS S +L
Sbjct: 91 DVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLR 150
Query: 448 VGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLVAGYA 627
+GLQ+H +V KVGLDLNLF+GNGLI++YGKCG L EA V DEM ++DVVSWNS+VAGYA
Sbjct: 151 IGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYA 210
Query: 628 QNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTNTSRNNVMAVNDMFINHANESLVSW 807
QN +FDDAL++CR M +PD+ TMASLLPAVTNTS NV+ V +MF+N +SLVSW
Sbjct: 211 QNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSW 270
Query: 808 NVMIAVYVNN 837
NVMI+VY+ N
Sbjct: 271 NVMISVYMKN 280
Score = 95.5 bits (236), Expect = 1e-17
Identities = 55/163 (33%), Positives = 87/163 (53%)
Frame = +1
Query: 262 IFDEMLDKNVAFFNVMIRSYVYNHFYQDALVVYKNMATHSIFPDHYTYPCVLKACSGSAS 441
+F + K++ +NVMI Y+ N ++ +Y M + PD T VL+AC ++
Sbjct: 258 MFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSA 317
Query: 442 LWVGLQIHASVVKVGLDLNLFIGNGLISVYGKCGYLMEACRVPDEMPNRDVVSWNSLVAG 621
L +G +IH V + L N+ + N LI +Y +CG L +A RV D M RDV SW SL++
Sbjct: 318 LLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISA 377
Query: 622 YAQNGRFDDALEVCRNMQTFGVEPDSGTMASLLPAVTNTSRNN 750
Y G+ +A+ + MQ G PDS ++L A +++ N
Sbjct: 378 YGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLN 420