BLASTX nr result

ID: Panax21_contig00026850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026850
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   100   1e-19
ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    83   3e-14
ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    83   3e-14
emb|CBI41044.3| unnamed protein product [Vitis vinifera]               83   3e-14
emb|CBI33259.3| unnamed protein product [Vitis vinifera]               83   3e-14

>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus]
          Length = 596

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = -1

Query: 545 AHFQNNPXXXXXXXXXXXXXXKAPASHLRDVPEYLLDPITQEASKIVKLSSAAMGRNTNS 366
           AHF++NP                PA HLRDVP+YL+DP+TQEASKI+KL+ AAMG N  S
Sbjct: 486 AHFESNPKDLDLLKHDKILSKNPPAPHLRDVPDYLVDPVTQEASKIIKLARAAMG-NVQS 544

Query: 365 ARRKGFKGKSRN-RDPLKSFSAEGSKQSK 282
            RR+GFK KSRN +DPLK+FSAEG K+S+
Sbjct: 545 GRRRGFKRKSRNDKDPLKTFSAEGPKRSR 573


>ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
           [Vitis vinifera]
          Length = 305

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = -1

Query: 545 AHFQNNPXXXXXXXXXXXXXXKAPASHLRDVPEYLLDPITQEASKIVKLSSAAMGRNTNS 366
           AHF+ N               K   +HLRDVP+YLLDP TQEASKIVKL+ AAMG NTN 
Sbjct: 195 AHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMG-NTNP 253

Query: 365 ARRKGFKGKSR-NRDPLKSFSAEGSKQS 285
           ARR+G + K R +RDPLK+FSAE  K++
Sbjct: 254 ARRQGSRRKFRKSRDPLKTFSAEAPKKA 281


>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
           vinifera]
          Length = 545

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = -1

Query: 545 AHFQNNPXXXXXXXXXXXXXXKAPASHLRDVPEYLLDPITQEASKIVKLSSAAMGRNTNS 366
           AHF+ N               K   +HLRDVP+YLLDP TQEASKIVKL+ AAMG NTN 
Sbjct: 435 AHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMG-NTNP 493

Query: 365 ARRKGFKGKSR-NRDPLKSFSAEGSKQS 285
           ARR+G + K R +RDPLK+FSAE  K++
Sbjct: 494 ARRQGSRRKFRKSRDPLKTFSAEAPKKA 521


>emb|CBI41044.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = -1

Query: 545 AHFQNNPXXXXXXXXXXXXXXKAPASHLRDVPEYLLDPITQEASKIVKLSSAAMGRNTNS 366
           AHF+ N               K   +HLRDVP+YLLDP TQEASKIVKL+ AAMG NTN 
Sbjct: 191 AHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMG-NTNP 249

Query: 365 ARRKGFKGKSR-NRDPLKSFSAEGSKQS 285
           ARR+G + K R +RDPLK+FSAE  K++
Sbjct: 250 ARRQGSRRKFRKSRDPLKTFSAEAPKKA 277


>emb|CBI33259.3| unnamed protein product [Vitis vinifera]
          Length = 8206

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = -1

Query: 545  AHFQNNPXXXXXXXXXXXXXXKAPASHLRDVPEYLLDPITQEASKIVKLSSAAMGRNTNS 366
            AHF+ N               K   +HLRDVP+YLLDP TQEASKIVKL+ AAMG NTN 
Sbjct: 8096 AHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMG-NTNP 8154

Query: 365  ARRKGFKGKSR-NRDPLKSFSAEGSKQS 285
            ARR+G + K R +RDPLK+FSAE  K++
Sbjct: 8155 ARRQGSRRKFRKSRDPLKTFSAEAPKKA 8182