BLASTX nr result

ID: Panax21_contig00026849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026849
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]   183   1e-44
emb|CBI39039.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis tha...   165   4e-39
dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]           163   2e-38
ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus...   105   5e-21

>emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]
          Length = 150

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/97 (90%), Positives = 90/97 (92%)
 Frame = +3

Query: 6   QFRFFLLLLISHREQLLLVQGHQMRDFPPTPRNRSSGRLPSTHLSLYKKPLPRGEHKLRD 185
           QF FFLLLLISHRE LLLVQGHQMRD PPTPRNRSSGRLPSTHLS+YKKPLPRGE KL+D
Sbjct: 33  QFLFFLLLLISHRELLLLVQGHQMRDLPPTPRNRSSGRLPSTHLSIYKKPLPRGEQKLQD 92

Query: 186 EYVLDSRIHSRPDPPWNFVNLQKHSRRGLVMIFSKIT 296
           EYVLDSRIHSRPDPPWNF NL KHSRRG VMIFSKIT
Sbjct: 93  EYVLDSRIHSRPDPPWNFRNLPKHSRRGFVMIFSKIT 129


>emb|CBI39039.3| unnamed protein product [Vitis vinifera]
          Length = 199

 Score =  181 bits (458), Expect = 7e-44
 Identities = 87/99 (87%), Positives = 89/99 (89%)
 Frame = +3

Query: 6   QFRFFLLLLISHREQLLLVQGHQMRDFPPTPRNRSSGRLPSTHLSLYKKPLPRGEHKLRD 185
           QF FFLLLLISHRE LLLVQGHQMRD PPTPRNRSSGRLPSTHLS+YKKPL RGE KL+D
Sbjct: 101 QFLFFLLLLISHRELLLLVQGHQMRDLPPTPRNRSSGRLPSTHLSIYKKPLSRGEQKLQD 160

Query: 186 EYVLDSRIHSRPDPPWNFVNLQKHSRRGLVMIFSKITGC 302
           EYVLDSRIHSRPDPPWNF NL KHSRRG VMIFSKI  C
Sbjct: 161 EYVLDSRIHSRPDPPWNFWNLPKHSRRGFVMIFSKIIRC 199


>ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis thaliana]
           gi|42570727|ref|NP_973437.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|44888124|sp|P93308.1|M530_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00530;
           AltName: Full=ORF109 gi|1785714|emb|CAA69737.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|330250966|gb|AEC06060.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 109

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/105 (79%), Positives = 88/105 (83%), Gaps = 9/105 (8%)
 Frame = +3

Query: 15  FFLLLLISHREQLLLVQGHQMRDFPPTPRNRSSGRLPS---------THLSLYKKPLPRG 167
           FFLLLLISHREQLLLVQGHQMRD  PTPRNRS+GRLPS         THLS++KK LPRG
Sbjct: 5   FFLLLLISHREQLLLVQGHQMRDLLPTPRNRSNGRLPSPFSRVINPSTHLSIHKKALPRG 64

Query: 168 EHKLRDEYVLDSRIHSRPDPPWNFVNLQKHSRRGLVMIFSKITGC 302
           E KL+DEY LDSRIHSRPDP WNF NLQKHSR+GLVMIFSKIT C
Sbjct: 65  ERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMIFSKITRC 109


>dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]
          Length = 109

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/105 (78%), Positives = 87/105 (82%), Gaps = 9/105 (8%)
 Frame = +3

Query: 15  FFLLLLISHREQLLLVQGHQMRDFPPTPRNRSSGRLPS---------THLSLYKKPLPRG 167
           FFLLLLISHREQLLLVQGHQMRD  PTPRNRS+GRLPS         THL ++KK LPRG
Sbjct: 5   FFLLLLISHREQLLLVQGHQMRDLLPTPRNRSNGRLPSPFSRVINPSTHLPIHKKALPRG 64

Query: 168 EHKLRDEYVLDSRIHSRPDPPWNFVNLQKHSRRGLVMIFSKITGC 302
           E KL+DEY LDSRIHSRPDP WNF NLQKHSR+GLVMIFSKIT C
Sbjct: 65  ERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMIFSKITRC 109


>ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus]
           gi|353526373|ref|YP_004927448.1| orf159 (mitochondrion)
           [Brassica oleracea] gi|353526526|ref|YP_004927596.1|
           orf159 (mitochondrion) [Brassica carinata]
           gi|353526717|ref|YP_004927888.1| orf159 (mitochondrion)
           [Brassica rapa subsp. campestris]
           gi|353531399|ref|YP_004927791.1| orf159 (mitochondrion)
           [Brassica juncea] gi|37591072|dbj|BAC98874.1|
           hypothetical protein [Brassica napus]
           gi|335354905|gb|AEH43461.1| orf159 [Brassica rapa subsp.
           campestris] gi|335354918|gb|AEH43473.1| orf159 [Brassica
           oleracea] gi|335355057|gb|AEH43611.1| orf159 [Brassica
           carinata] gi|335355132|gb|AEH43685.1| orf159 [Brassica
           juncea] gi|339511333|emb|CBX48388.1| unnamed protein
           product [Brassica napus]
          Length = 159

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/71 (73%), Positives = 58/71 (81%)
 Frame = +3

Query: 90  PTPRNRSSGRLPSTHLSLYKKPLPRGEHKLRDEYVLDSRIHSRPDPPWNFVNLQKHSRRG 269
           P+P +R   R  S HLS++KK LPRGE KL+DEY LDSRIHSRPDP WNF NLQKHSR+G
Sbjct: 91  PSPFSRV--RNTSPHLSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKG 148

Query: 270 LVMIFSKITGC 302
           LVMIFSKIT C
Sbjct: 149 LVMIFSKITRC 159


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