BLASTX nr result

ID: Panax21_contig00026839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026839
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28171.3| unnamed protein product [Vitis vinifera]              429   e-118
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]   413   e-113
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...   377   e-102
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...   346   7e-93
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...   327   3e-87

>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  429 bits (1102), Expect = e-118
 Identities = 218/376 (57%), Positives = 268/376 (71%), Gaps = 1/376 (0%)
 Frame = -1

Query: 1127 DCVYFLASPLTCKKGHECEYRHSEIALINPRDCWYWLAGSCLNPNCAFRHPPLDGHIEAS 948
            DCVYFLASPLTCKKG +CEYRHSE A +NPRDCWYWL+GSCLNP CAFRHPPLDGHIEAS
Sbjct: 11   DCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRHPPLDGHIEAS 70

Query: 947  SESSLPRYDSTIPVNRTNVPCYFYFNGFCNKGERCSFMHGPDDDTLAWKSAQTASTVNDA 768
            SE     + S++PVN+TN PCYFY+NGFCNKGERCSF+HGPD                  
Sbjct: 71   SEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPD------------------ 112

Query: 767  AVVDKKMATRSDTGLTPIETQINTSETAIKGSTEPQSKAKEDFHQLAPSNVPENSVSPHT 588
                   +T ++TG T I  + N+ ETA   + E Q + KED  +L   N  E S SP  
Sbjct: 113  -------STGTETGPTLIGRRPNSVETATVTAIETQFQPKEDLQKLVFKNAFEQSSSPQI 165

Query: 587  SDSECEEAALVRSERLPPAEGFVESSSLVCTDQSSEDQVDCHLEREEWLESSPGFDVIVD 408
            S SE EEAA VRS+ L PAEGF +S SL+ TDQSSE+QVD  +E EE  ESSPGFDV+VD
Sbjct: 166  SMSEYEEAAAVRSDSLLPAEGFNQSRSLLSTDQSSEEQVDGPIEPEERWESSPGFDVLVD 225

Query: 407  DRLEDMVYEDDPEYVPSLDVERRELNSQFLGYDYENPVGYDPAYPDAGNFYEQILHDSYD 228
            +  E++VYED+PEY+ +L+ E RELN QFLGYD+E+PV YD  YP+A   Y+  ++DS+D
Sbjct: 226  NISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYDLMYPEAEILYDHRIYDSFD 285

Query: 227  HLDDEHNSDYTRRTPGQSRERVFDRLSPQKRKFSGMELACNG-SNMDLRDHLKRRRLVDG 51
             LD+EH+SD+ R  PG SRER+ D + P+KRK   +ELA  G S +DLRD L++RR+ DG
Sbjct: 286  CLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSGLDLRDRLRKRRVTDG 345

Query: 50   HSVTHFSKRHYSSHLI 3
            H+VT FS+RH SS LI
Sbjct: 346  HTVTRFSRRHDSSCLI 361


>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score =  413 bits (1061), Expect = e-113
 Identities = 218/399 (54%), Positives = 265/399 (66%), Gaps = 24/399 (6%)
 Frame = -1

Query: 1127 DCVYFLASPLTCKKGHECEYRHSEIALINPRDCWYWLAGSCLNPNCAFRHP--------- 975
            DCVYFLASPLTCKKG +CEYRHSE A +NPRDCWYWL+GSCLNP CAFRHP         
Sbjct: 11   DCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRHPVRVMLKRIQ 70

Query: 974  --------------PLDGHIEASSESSLPRYDSTIPVNRTNVPCYFYFNGFCNKGERCSF 837
                          PLDGHIEASSE     + S++PVN+TN PCYFY+NGFCNKGERCSF
Sbjct: 71   RDSRSGLLEEKVHLPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSF 130

Query: 836  MHGPDDDTLAWKSAQTASTVNDAAVVDKKMATRSDTGLTPIETQINTSETAIKGSTEPQS 657
            +HGPD    AWKS +TAS VND    +      ++TG T I  + N+ ETA   + E Q 
Sbjct: 131  LHGPDSSAPAWKSLKTASEVNDMRPPENNXIAGTETGPTLIGRRPNSVETATVTAIETQF 190

Query: 656  KAKEDFHQLAPSNVPENSVSPHTSDSECEEAALVRSERLPPAEGFVESSSLVCTDQSSED 477
            + KED  +L   N  E S SP  S SE EEAA VRS+ L PAEGF +S SL+ TDQSSE+
Sbjct: 191  QPKEDLQKLVFKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQSRSLLSTDQSSEE 250

Query: 476  QVDCHLEREEWLESSPGFDVIVDDRLEDMVYEDDPEYVPSLDVERRELNSQFLGYDYENP 297
            QVD  +E EE  ESSPGFDV+VD+  E++VYED+PEY+ +L+ E RELN QFLGYD+E+P
Sbjct: 251  QVDGPIEPEERWESSPGFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDP 310

Query: 296  VGYDPAYPDAGNFYEQILHDSYDHLDDEHNSDYTRRTPGQSRERVFDRLSPQKRKFSGME 117
            V YD  YP+A   Y+  ++DS+D LD+EH            R   +    P KRK   +E
Sbjct: 311  VEYDLMYPEAEILYDHRIYDSFDCLDNEH------------RREFWILFCPGKRKNFPVE 358

Query: 116  LACNG-SNMDLRDHLKRRRLVDGHSVTHFSKRHYSSHLI 3
            LA  G S +DLRD L++RR+ DGH+VT FS+RH SS LI
Sbjct: 359  LAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLI 397


>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223536251|gb|EEF37903.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 530

 Score =  377 bits (969), Expect = e-102
 Identities = 192/376 (51%), Positives = 242/376 (64%), Gaps = 1/376 (0%)
 Frame = -1

Query: 1127 DCVYFLASPLTCKKGHECEYRHSEIALINPRDCWYWLAGSCLNPNCAFRHPPLDGHIEAS 948
            DCVYFLASPLTCKKG ECEYRH+EIA +NPRDCWYWLAG C NP CAFRHPPL+ H E  
Sbjct: 13   DCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAFRHPPLEMHAEGP 72

Query: 947  SESSLPRYDSTIPVNRTNVPCYFYFNGFCNKGERCSFMHGPDDDTLAWKSAQTASTVNDA 768
             E S     S++P N+TNVPCYF+FNGFCNKG+RC FMHGP+ ++   KS  T+S + + 
Sbjct: 73   PELS----SSSVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEANSFTGKSGSTSSAIKEN 128

Query: 767  AVVDKKMATRSDTGLTPIETQINTSETAIKGSTEPQSKAKEDFHQLAPSNVPENSVSPHT 588
              +D K++  +DT   P E   N SETA K   + + +  EDF   AP      S SP  
Sbjct: 129  IPLDSKISGGNDTVSAPTEVNANPSETAAKAVKDLKLQPYEDFQFPAPEKTVMRSPSPQI 188

Query: 587  SDSECEEAALVRSERLPPAEGFVESSSLVCTDQSSEDQVDCHLEREEWLESSPGFDVIVD 408
            + S+ EEA ++    L     F ES SL  T QS E+++D H+E EE  ESSPGFDV+VD
Sbjct: 189  AVSQSEEAVILNPSFLLKVNSFTESRSLAYTTQSPEEEMDDHVEPEERWESSPGFDVLVD 248

Query: 407  DRLEDMVYEDDPEYVPSLDVERRELNSQFLGYDYENPVGYDPAYPDAGNFYEQILHDSYD 228
            D+ E++ YEDD EY+  LD+E+R+ N+ FLGYD+EN V YD AY DA + Y    +D+ D
Sbjct: 249  DKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLVEYDHAYHDAEDDYGSGKYDNTD 308

Query: 227  HLDDEHNSDYTRRTPGQSRERVFDRLSPQKRKFSGMELACNGSN-MDLRDHLKRRRLVDG 51
              D+ H  D      G SR  V D L  QKRK   MEL+ N    +DLRD L + R + G
Sbjct: 309  FADNVHIFDDVGNDSGLSRNSVTDSLLSQKRKLVAMELSINDQRIVDLRDRLGKDRAIHG 368

Query: 50   HSVTHFSKRHYSSHLI 3
            H+V   S+RHYSSHL+
Sbjct: 369  HTVIRSSRRHYSSHLL 384


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
            [Glycine max]
          Length = 526

 Score =  346 bits (887), Expect = 7e-93
 Identities = 179/378 (47%), Positives = 239/378 (63%), Gaps = 3/378 (0%)
 Frame = -1

Query: 1127 DCVYFLASPLTCKKGHECEYRHSEIALINPRDCWYWLAGSCLNPNCAFRHPPLDGHIEAS 948
            DCVYFLASPLTCKKG ECEYRH+EIA +NPRDCWYWL+G CLNP CAFRHPPLDGH  A 
Sbjct: 11   DCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRHPPLDGHTGAP 70

Query: 947  SESSLPRYDSTIPVNRTNVPCYFYFNGFCNKGERCSFMHGPDDDTLAWKSAQTASTVNDA 768
              S   +  +++P N+T VPCYF+FNGFCNKG+RCSF+HGPDD     K  +  +   DA
Sbjct: 71   VPSEPTQ--TSLPANKTLVPCYFFFNGFCNKGDRCSFLHGPDDSIFNIKPVKNENGSTDA 128

Query: 767  AVVDKKMATRSDTGLTPIETQINTSETAIKGSTEPQSKAKEDFHQLAPSNVPENSVSPHT 588
              ++ K  + + TG+T   T  + S  A K  ++ + + KED     P NV +       
Sbjct: 129  LNLENKAPSGNRTGVT--STPTDRSVAAPKNLSDLKHQPKEDHQLELPKNVKQQGDYLEL 186

Query: 587  SDSECEEAALVRSERLPPAEGFVESSSLVCTDQSSEDQVDCHLEREEWLES---SPGFDV 417
            S SE +EAA+ RS+   P +GFV +   +CT QSSE+QV+ H+E EEW ES   SPGFDV
Sbjct: 187  SASEYKEAAVSRSDSSIPDDGFVHNVPHLCTGQSSEEQVNSHIEPEEWWESSPHSPGFDV 246

Query: 416  IVDDRLEDMVYEDDPEYVPSLDVERRELNSQFLGYDYENPVGYDPAYPDAGNFYEQILHD 237
            +V D +E++ YE+D EY+P +D + +ELN Q+  Y++ +PV YD   P+A   YEQ  +D
Sbjct: 247  LVHDEVENLGYEEDSEYLPVVDRDEQELNDQYFRYEFIDPVEYDTICPEADILYEQETYD 306

Query: 236  SYDHLDDEHNSDYTRRTPGQSRERVFDRLSPQKRKFSGMELACNGSNMDLRDHLKRRRLV 57
             Y  LD +      R     + +   D +  +KR  +  E+A    N+DLRDHL+RRR V
Sbjct: 307  GYRCLDRDLIHVNGRTVHAYATDAFLDPILSRKRIRTSAEMAAYDKNLDLRDHLRRRREV 366

Query: 56   DGHSVTHFSKRHYSSHLI 3
            +G  VT F +R  SS L+
Sbjct: 367  NGPPVTGFLRRQESSPLM 384


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
            [Glycine max]
          Length = 524

 Score =  327 bits (839), Expect = 3e-87
 Identities = 172/378 (45%), Positives = 234/378 (61%), Gaps = 3/378 (0%)
 Frame = -1

Query: 1127 DCVYFLASPLTCKKGHECEYRHSEIALINPRDCWYWLAGSCLNPNCAFRHPPLDGHIEAS 948
            DCVYFLASPLTCKKG ECEYRH+EIA +NPRDCWYWL+G CLNP CAFRHPPLDGH  AS
Sbjct: 11   DCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRHPPLDGHTGAS 70

Query: 947  SESSLPRYDSTIPVNRTNVPCYFYFNGFCNKGERCSFMHGPDDDTLAWKSAQTASTVNDA 768
              S   +  +++P N+T VPCYF+FNG CNKG+RCSF+HGPDD     K  +  +   DA
Sbjct: 71   VPSEPTQ--TSLPANKTMVPCYFFFNGSCNKGDRCSFLHGPDDSIFTVKPVKNDNGSTDA 128

Query: 767  AVVDKKMATRSDTGLTPIETQINTSETAIKGSTEPQSKAKEDFHQLAPSNVPENSVSPHT 588
              ++ K ++ +  GL  + T  + S  A K  ++ + + KED     P +V +       
Sbjct: 129  LNLENKTSSGNRIGL--VSTPTDQSVAAPKNLSDLKLQPKEDHQLEIPKDVKQQGYYLEL 186

Query: 587  SDSECEEAALVRSERLPPAEGFVESSSLVCTDQSSEDQVDCHLEREEWLES---SPGFDV 417
            S SE +EAA+ RS+   P +GFV +   +CT+QSSE+QV+ H+E EE  ES   SPGFDV
Sbjct: 187  SASEYKEAAVSRSDSSIPDDGFVHNVPHLCTEQSSEEQVNSHIEPEERWESSPHSPGFDV 246

Query: 416  IVDDRLEDMVYEDDPEYVPSLDVERRELNSQFLGYDYENPVGYDPAYPDAGNFYEQILHD 237
            +V D ++++ YE+D EYV   D + +EL+ Q+ GY++++ V YD   P+A   YEQ  +D
Sbjct: 247  LVHDEVDNLGYEEDSEYVTVGDRDEQELDDQYFGYEFKDSVEYDTICPEADILYEQETYD 306

Query: 236  SYDHLDDEHNSDYTRRTPGQSRERVFDRLSPQKRKFSGMELACNGSNMDLRDHLKRRRLV 57
             Y  LD        R      R+   D    +KR     E+A    N+DLRDHL+RRR +
Sbjct: 307  GYRFLDRGLIHANGRTIHAYPRDVFLDPRLSRKRIRMSAEMAAYDKNLDLRDHLRRRREI 366

Query: 56   DGHSVTHFSKRHYSSHLI 3
             G  V++F +R  S  +I
Sbjct: 367  KGPPVSNFLRRESSPLMI 384


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