BLASTX nr result
ID: Panax21_contig00026837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00026837
(582 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus commun... 246 3e-63
ref|XP_002329212.1| GRAS family transcription factor [Populus tr... 236 2e-60
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun... 235 5e-60
ref|XP_002316032.1| GRAS family transcription factor [Populus tr... 233 1e-59
ref|XP_002316034.1| GRAS family transcription factor [Populus tr... 231 5e-59
>ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis]
gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative
[Ricinus communis]
Length = 562
Score = 246 bits (627), Expect = 3e-63
Identities = 116/193 (60%), Positives = 154/193 (79%)
Frame = +1
Query: 1 LGLPFSFNVVMVADMLDLNEDLFKLDTEEAVAVYSAFVLSTMISRPGQVECLVRVIQKIN 180
+ +PFSF VMV+DMLDL ++LF+LD+EEAVAVYS + L ++ P ++E ++ +++ IN
Sbjct: 361 MNVPFSFRAVMVSDMLDLKKELFELDSEEAVAVYSEYFLMNLLVAPNRLESIMGMLRNIN 420
Query: 181 PCVMVISEVEANHNSPVFVNRFIEALFFYGALFDSMEECMDRDDPNRMISESINFGLALS 360
P VMV+ EVEAN+NSP FV+RFIEALFFY A FD + CM+RDDPNRM +ES+ F +
Sbjct: 421 PNVMVVMEVEANNNSPSFVHRFIEALFFYSAYFDCFDACMERDDPNRMAAESVFFHHGIR 480
Query: 361 NIVAADGEERRIRHVKSNVWKAFFARFGVVETELSKTCLYQASLVIKNFECANSCTLDMV 540
NIVA++GEERRIRHVK +VW++FFARFG+++TELS + LYQASLV+K F C +SCTLD+
Sbjct: 481 NIVASEGEERRIRHVKIDVWRSFFARFGMIQTELSTSSLYQASLVLKKFPCGSSCTLDVN 540
Query: 541 GKSLSIGWKGIPI 579
KSL+I WK PI
Sbjct: 541 EKSLNISWKATPI 553
>ref|XP_002329212.1| GRAS family transcription factor [Populus trichocarpa]
gi|222870993|gb|EEF08124.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 594
Score = 236 bits (602), Expect = 2e-60
Identities = 106/193 (54%), Positives = 154/193 (79%)
Frame = +1
Query: 1 LGLPFSFNVVMVADMLDLNEDLFKLDTEEAVAVYSAFVLSTMISRPGQVECLVRVIQKIN 180
+ +PFSF +VMV+D+LDL E+L ++D EE +AVYS+++ +I+ P +++ ++++I+ IN
Sbjct: 393 MNIPFSFKIVMVSDLLDLKENLLEIDVEEKIAVYSSYLPRKLIAMPNRLDSMMKMIRNIN 452
Query: 181 PCVMVISEVEANHNSPVFVNRFIEALFFYGALFDSMEECMDRDDPNRMISESINFGLALS 360
PC+MV++EVEANHN+P FV+RF++ LF+Y A FD ++ CM+RDDPNRMI+ES+ FG +
Sbjct: 453 PCIMVVTEVEANHNAPSFVHRFVDLLFYYSAYFDCLDACMERDDPNRMITESLYFGEGIR 512
Query: 361 NIVAADGEERRIRHVKSNVWKAFFARFGVVETELSKTCLYQASLVIKNFECANSCTLDMV 540
N VA++GEER IR VK +VW+AFFARFG+VET+LS + L QA L++K F A+S TLD+
Sbjct: 513 NSVASEGEERIIRSVKLDVWRAFFARFGMVETDLSSSSLDQAKLIVKKFNFASSFTLDVD 572
Query: 541 GKSLSIGWKGIPI 579
GKSL GWKG P+
Sbjct: 573 GKSLLFGWKGTPL 585
>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
[Ricinus communis]
Length = 594
Score = 235 bits (599), Expect = 5e-60
Identities = 105/193 (54%), Positives = 149/193 (77%)
Frame = +1
Query: 1 LGLPFSFNVVMVADMLDLNEDLFKLDTEEAVAVYSAFVLSTMISRPGQVECLVRVIQKIN 180
+ + FSF + +V+D+LDL EDL LD E VA+Y A++ +IS P +++ ++R+I+ +N
Sbjct: 383 MNIAFSFKMALVSDLLDLKEDLLDLDDGETVAIYFAYLPRNLISLPNRLDSMMRMIKNVN 442
Query: 181 PCVMVISEVEANHNSPVFVNRFIEALFFYGALFDSMEECMDRDDPNRMISESINFGLALS 360
PCV+V++EVEANHNSP FVNRF+EALF+Y A FD ++ CM+R+D NRMI ES+ FG+ +
Sbjct: 443 PCVIVVAEVEANHNSPTFVNRFVEALFYYSAYFDCLDACMERNDKNRMIMESMYFGIGIK 502
Query: 361 NIVAADGEERRIRHVKSNVWKAFFARFGVVETELSKTCLYQASLVIKNFECANSCTLDMV 540
N++A +GEER IR+VK + W+AFFARFG+VET+LS + L QA+L++K F C N TLD
Sbjct: 503 NMIATEGEERVIRNVKLDAWRAFFARFGMVETDLSSSALLQANLIVKKFACGNCFTLDRN 562
Query: 541 GKSLSIGWKGIPI 579
GKSL +GWKG P+
Sbjct: 563 GKSLVLGWKGTPL 575
>ref|XP_002316032.1| GRAS family transcription factor [Populus trichocarpa]
gi|222865072|gb|EEF02203.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 549
Score = 233 bits (595), Expect = 1e-59
Identities = 113/193 (58%), Positives = 149/193 (77%)
Frame = +1
Query: 1 LGLPFSFNVVMVADMLDLNEDLFKLDTEEAVAVYSAFVLSTMISRPGQVECLVRVIQKIN 180
+ LP SFNVVMV+D+LDL ED F+LD EE VAV+S F L+++I+ P +++ L++VI+ IN
Sbjct: 348 MNLPCSFNVVMVSDILDLREDHFQLDDEETVAVFSEFYLASLIASPNRLDSLMKVIRNIN 407
Query: 181 PCVMVISEVEANHNSPVFVNRFIEALFFYGALFDSMEECMDRDDPNRMISESINFGLALS 360
P VMVI EVEANHNSPVFV+RF+E LF+ A FD ++ CM+RDDPNR+ISESI FG +
Sbjct: 408 PRVMVIIEVEANHNSPVFVDRFVETLFYLSAFFDCLDTCMERDDPNRVISESIYFGEGIR 467
Query: 361 NIVAADGEERRIRHVKSNVWKAFFARFGVVETELSKTCLYQASLVIKNFECANSCTLDMV 540
I+ A+GEER IR+VK +VW+A FARF +VE E+S + QA+++ K C +CTL+M
Sbjct: 468 KILVAEGEERNIRNVKIDVWRACFARFEMVEAEMSMSSTCQANIMAKKLACGKACTLNMD 527
Query: 541 GKSLSIGWKGIPI 579
GKSL IGWKG PI
Sbjct: 528 GKSLIIGWKGTPI 540
>ref|XP_002316034.1| GRAS family transcription factor [Populus trichocarpa]
gi|222865074|gb|EEF02205.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 588
Score = 231 bits (590), Expect = 5e-59
Identities = 114/193 (59%), Positives = 147/193 (76%)
Frame = +1
Query: 1 LGLPFSFNVVMVADMLDLNEDLFKLDTEEAVAVYSAFVLSTMISRPGQVECLVRVIQKIN 180
+ +PFSF VVMV+DMLDL +DLF+L EEAVAVY+ L ++I+ P +++ +++V + IN
Sbjct: 380 MNIPFSFKVVMVSDMLDLKKDLFELGAEEAVAVYAENSLRSLIALPNRLDSIMKVFRNIN 439
Query: 181 PCVMVISEVEANHNSPVFVNRFIEALFFYGALFDSMEECMDRDDPNRMISESINFGLALS 360
P ++V+ EVEAN+NSP FVNRFIEALFFY A FD + CM RD PNRMI+ES +
Sbjct: 440 PRIVVVMEVEANNNSPSFVNRFIEALFFYSAYFDCFDACMGRDSPNRMIAESKYIRQEIR 499
Query: 361 NIVAADGEERRIRHVKSNVWKAFFARFGVVETELSKTCLYQASLVIKNFECANSCTLDMV 540
NIVA +GEER+IRHVK +VW+ FFARF +VETELSK+ LYQASL++ +SCTLDM
Sbjct: 500 NIVATEGEERKIRHVKLDVWRTFFARFAMVETELSKSSLYQASLLLNKIARWSSCTLDMN 559
Query: 541 GKSLSIGWKGIPI 579
KSL IGWKG P+
Sbjct: 560 EKSLVIGWKGTPM 572