BLASTX nr result

ID: Panax21_contig00026814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026814
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270373.1| PREDICTED: uncharacterized CRM domain-contai...   145   1e-32
ref|XP_003524371.1| PREDICTED: uncharacterized CRM domain-contai...   141   1e-31
ref|XP_003530768.1| PREDICTED: uncharacterized CRM domain-contai...   134   2e-29
ref|XP_002863185.1| predicted protein [Arabidopsis lyrata subsp....   128   9e-28
ref|XP_002328988.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27

>ref|XP_002270373.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic [Vitis vinifera]
           gi|296089227|emb|CBI38999.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score =  145 bits (365), Expect = 1e-32
 Identities = 72/108 (66%), Positives = 84/108 (77%)
 Frame = +1

Query: 364 IAGPCDAILPWLHVRHIRNSSIELKTDNDIVKFSIGVQLVNDGNQTEAKKTMRRIKMSKK 543
           + G  DA+  W   R++ N+SIELK D+D+V+F+IG      G   + KK MRR+KMS+K
Sbjct: 1   MVGCGDALSKWARARYMSNTSIELKPDSDVVRFNIGELPGKTGTSKKGKKKMRRVKMSRK 60

Query: 544 AKRNELRFYRLKAKKKMNSPNPEVRIRYKLGKAKRKEEWLIEKLRKFD 687
           AK NELRFYRLKAKKKM SPNPEVRIRYKL KAKRKEEWLIEKLRKFD
Sbjct: 61  AKLNELRFYRLKAKKKMTSPNPEVRIRYKLEKAKRKEEWLIEKLRKFD 108


>ref|XP_003524371.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Glycine max]
          Length = 282

 Score =  141 bits (356), Expect = 1e-31
 Identities = 71/113 (62%), Positives = 86/113 (76%)
 Frame = +1

Query: 349 LQRQSIAGPCDAILPWLHVRHIRNSSIELKTDNDIVKFSIGVQLVNDGNQTEAKKTMRRI 528
           +QR +I G  D +  WL  R+I N S+ELKT ND+++FS+G    +D N  +  +  ++ 
Sbjct: 1   MQRSNIFGSHDILGSWLPARYISNESVELKTHNDVIRFSLGKS--DDINNAKKSQLNKKF 58

Query: 529 KMSKKAKRNELRFYRLKAKKKMNSPNPEVRIRYKLGKAKRKEEWLIEKLRKFD 687
           KMS+KAK NELRFYRLKAKKKMNSPNPEVRIRYKL KAKRKE WLIEKLRKFD
Sbjct: 59  KMSRKAKLNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKETWLIEKLRKFD 111


>ref|XP_003530768.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Glycine max]
          Length = 282

 Score =  134 bits (336), Expect = 2e-29
 Identities = 69/113 (61%), Positives = 85/113 (75%)
 Frame = +1

Query: 349 LQRQSIAGPCDAILPWLHVRHIRNSSIELKTDNDIVKFSIGVQLVNDGNQTEAKKTMRRI 528
           +QR +I G  D +  WL  R+I N S+ELKTDN++V+FS+     +D N  +  +  +R+
Sbjct: 1   MQRSNIFGIHDILGNWLPARYISNESVELKTDNNVVRFSLDKS--DDINYGKKSQLNKRV 58

Query: 529 KMSKKAKRNELRFYRLKAKKKMNSPNPEVRIRYKLGKAKRKEEWLIEKLRKFD 687
           KMS+KAK NELRFYRLKAKKKM SPNPEVRI YKL KAKRKE WL+EKLRKFD
Sbjct: 59  KMSRKAKLNELRFYRLKAKKKMISPNPEVRITYKLEKAKRKETWLVEKLRKFD 111


>ref|XP_002863185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309019|gb|EFH39444.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 343

 Score =  128 bits (322), Expect = 9e-28
 Identities = 69/127 (54%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
 Frame = +1

Query: 316 PCNPSPVRILTLQRQSIAGPCDAILPWLHVRHIRNSSIELKTDNDIVKFSIGVQLVNDGN 495
           PC  +   +L  QR+++     A   +   R++ NS++EL+TD+++V+F+    +   GN
Sbjct: 47  PCKSASFDVLQAQRRNLF----AYDGFFSRRYLSNSTVELRTDDNVVRFAFN-NVTGSGN 101

Query: 496 Q---TEAKKTMRRIKMSKKAKRNELRFYRLKAKKKMNSPNPEVRIRYKLGKAKRKEEWLI 666
               T  +K  +R KMS+KAK NELRFYRLKAKKKMNSPNPEVRIRYKL KAKRKEEWLI
Sbjct: 102 NVVPTRKEKKWKRAKMSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLI 161

Query: 667 EKLRKFD 687
           EKLRK+D
Sbjct: 162 EKLRKYD 168


>ref|XP_002328988.1| predicted protein [Populus trichocarpa] gi|222839222|gb|EEE77573.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  127 bits (319), Expect = 2e-27
 Identities = 66/98 (67%), Positives = 77/98 (78%), Gaps = 4/98 (4%)
 Frame = +1

Query: 406 RHIRNSSIELKTDNDIVKFSIGVQLVNDGNQTEAKKTMRRI----KMSKKAKRNELRFYR 573
           RH+  +S+EL+TDND V+FSI      DG   + KK+M+++    KMSKKAK NELRFYR
Sbjct: 72  RHMSTASLELRTDNDFVRFSI----TKDGYSAKEKKSMKKVPRYVKMSKKAKLNELRFYR 127

Query: 574 LKAKKKMNSPNPEVRIRYKLGKAKRKEEWLIEKLRKFD 687
           LKAKKKMNSPNPEVRIRYKL KAKRKE WLIEKLRK +
Sbjct: 128 LKAKKKMNSPNPEVRIRYKLEKAKRKEAWLIEKLRKLE 165


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