BLASTX nr result

ID: Panax21_contig00026731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026731
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   104   8e-21
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...    95   7e-18
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...    95   7e-18
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  104 bits (259), Expect = 8e-21
 Identities = 60/108 (55%), Positives = 66/108 (61%), Gaps = 8/108 (7%)
 Frame = -1

Query: 460 SSTAAAALKAIFKVPSSSATNIEXXXXXXXXXXXXXPELRRTKSFSASKNEGFSGVFEPQ 281
           SSTAAAALKAIFK                       PELRRTKSFSASK EGFSGV EPQ
Sbjct: 64  SSTAAAALKAIFKGSGGGPDKSNSYRHKPSSSSSFFPELRRTKSFSASKGEGFSGVVEPQ 123

Query: 280 RHSCDVRARNTLWTLFSLDDDNK--------TVNVQTQNVATGSVAGP 161
           R SCDVR RNTLWTLF+LDD+ K         V+V T+N+ +  V GP
Sbjct: 124 RKSCDVRVRNTLWTLFNLDDERKGSKREAWGEVDVDTRNLGSSCVGGP 171


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 54/96 (56%), Positives = 63/96 (65%)
 Frame = -1

Query: 460 SSTAAAALKAIFKVPSSSATNIEXXXXXXXXXXXXXPELRRTKSFSASKNEGFSGVFEPQ 281
           SS AAAALKAIF+ PS++                  PELRRTKSFSASKNEGFSGVFEPQ
Sbjct: 64  SSAAAAALKAIFR-PSATGAG-PGGLSGRNKPSSFLPELRRTKSFSASKNEGFSGVFEPQ 121

Query: 280 RHSCDVRARNTLWTLFSLDDDNKTVNVQTQNVATGS 173
           R SCDVR RNTLWTLF+ DD+   +  +   V+  +
Sbjct: 122 RKSCDVRVRNTLWTLFTQDDERNPLKNEAPRVSNAA 157


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 54/96 (56%), Positives = 63/96 (65%)
 Frame = -1

Query: 460 SSTAAAALKAIFKVPSSSATNIEXXXXXXXXXXXXXPELRRTKSFSASKNEGFSGVFEPQ 281
           SS AAAALKAIF+ PS++                  PELRRTKSFSASKNEGFSGVFEPQ
Sbjct: 64  SSAAAAALKAIFR-PSATGAG-PGGLSGRNKPSSFLPELRRTKSFSASKNEGFSGVFEPQ 121

Query: 280 RHSCDVRARNTLWTLFSLDDDNKTVNVQTQNVATGS 173
           R SCDVR RNTLWTLF+ DD+   +  +   V+  +
Sbjct: 122 RKSCDVRVRNTLWTLFTQDDERNPLKNEAPRVSNAA 157


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 51/79 (64%), Positives = 56/79 (70%)
 Frame = -1

Query: 454 TAAAALKAIFKVPSSSATNIEXXXXXXXXXXXXXPELRRTKSFSASKNEGFSGVFEPQRH 275
           TA AALKAIFK P  S++N               PELRRTKSFSASKNEGFSGVFEPQR 
Sbjct: 60  TATAALKAIFKPPQPSSSN----NNNNSSKSSFFPELRRTKSFSASKNEGFSGVFEPQRK 115

Query: 274 SCDVRARNTLWTLFSLDDD 218
           SCDVR RNTLW+LF+ D +
Sbjct: 116 SCDVRVRNTLWSLFNQDSE 134


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 52/81 (64%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = -1

Query: 454 TAAAALKAIFKVP--SSSATNIEXXXXXXXXXXXXXPELRRTKSFSASKNEGFSGVFEPQ 281
           TA AALKAIFK    SSS+ N               PELRRTKSFSASKNEGFSGVFEPQ
Sbjct: 65  TATAALKAIFKPSQLSSSSNNNNNNNNNNNKSSSFFPELRRTKSFSASKNEGFSGVFEPQ 124

Query: 280 RHSCDVRARNTLWTLFSLDDD 218
           R SCDVR R TLW+LF+ DD+
Sbjct: 125 RKSCDVRERYTLWSLFTQDDE 145


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