BLASTX nr result
ID: Panax21_contig00026730
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00026730 (677 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521466.1| F-box/LRR-repeat protein, putative [Ricinus ... 239 4e-61 ref|XP_002323795.1| predicted protein [Populus trichocarpa] gi|2... 221 8e-56 emb|CBI34868.3| unnamed protein product [Vitis vinifera] 216 3e-54 ref|XP_002272892.1| PREDICTED: SCF E3 ubiquitin ligase complex F... 216 3e-54 emb|CAN59886.1| hypothetical protein VITISV_026168 [Vitis vinifera] 216 3e-54 >ref|XP_002521466.1| F-box/LRR-repeat protein, putative [Ricinus communis] gi|223539365|gb|EEF40956.1| F-box/LRR-repeat protein, putative [Ricinus communis] Length = 484 Score = 239 bits (610), Expect = 4e-61 Identities = 121/181 (66%), Positives = 147/181 (81%) Frame = +1 Query: 1 RLPLDLDNNHLLSIAEKFRGLSIFRLQSCCLVIGEGLKNLGVALSDDLEELALINCDVID 180 RLPLDL+N+HLL+IA FR LSI RLQSCCLV GEGLK LG+A+S L+ELALINCDV++ Sbjct: 304 RLPLDLNNDHLLAIAMNFRNLSILRLQSCCLVTGEGLKALGIAVSPVLQELALINCDVVE 363 Query: 181 RERGLLSTLGQNLRKLRKLDLSHNDLLPDKELMSMLVSTNYLQELKLRGCGGLTNAALVT 360 RE GLL+TLGQNLR+L+KLDLSHN+ L DKE +SMLVS N L ELKLRGC +T A++ Sbjct: 364 RESGLLATLGQNLRQLKKLDLSHNEFLLDKEFISMLVSCNSLVELKLRGCKRVTGMAMLC 423 Query: 361 MLKNCEHLESVDIMNCCRIEEDAVELFVLNSPRLRLLQIEKCKLSGVVRKLALNKAIEVI 540 M +NC+ LE VDIM+CC IE +A+ELF LNSPRLR +Q+E+ KLS V RK A + IEV+ Sbjct: 424 MFRNCKRLECVDIMHCCGIEAEAIELFFLNSPRLRCVQVEESKLSDVARKWAEHNFIEVV 483 Query: 541 A 543 A Sbjct: 484 A 484 >ref|XP_002323795.1| predicted protein [Populus trichocarpa] gi|222866797|gb|EEF03928.1| predicted protein [Populus trichocarpa] Length = 484 Score = 221 bits (564), Expect = 8e-56 Identities = 114/181 (62%), Positives = 142/181 (78%) Frame = +1 Query: 1 RLPLDLDNNHLLSIAEKFRGLSIFRLQSCCLVIGEGLKNLGVALSDDLEELALINCDVID 180 RLPLDL N+HL +I FRGLS RLQSCCLV GEGLK LG+AL+ LEELALINCDV++ Sbjct: 304 RLPLDLRNDHLSAIGLNFRGLSTLRLQSCCLVSGEGLKALGIALNSGLEELALINCDVVE 363 Query: 181 RERGLLSTLGQNLRKLRKLDLSHNDLLPDKELMSMLVSTNYLQELKLRGCGGLTNAALVT 360 RE GLL+TLGQ+ R+L+KLDLS+N+ L DKE +SMLVS N L EL LR C GLT ++V+ Sbjct: 364 RESGLLATLGQHTRQLKKLDLSYNEFLLDKEFISMLVSCNCLIELNLRRCAGLTTVSMVS 423 Query: 361 MLKNCEHLESVDIMNCCRIEEDAVELFVLNSPRLRLLQIEKCKLSGVVRKLALNKAIEVI 540 M KNC L+SVDIM+C I +AVELFVLNSP+LR LQ+E+ K+S V R A +K I+++ Sbjct: 424 MFKNCRKLQSVDIMHCDGIGAEAVELFVLNSPQLRGLQVEENKVSDVARSWASHKLIQIV 483 Query: 541 A 543 + Sbjct: 484 S 484 >emb|CBI34868.3| unnamed protein product [Vitis vinifera] Length = 383 Score = 216 bits (550), Expect = 3e-54 Identities = 109/165 (66%), Positives = 137/165 (83%) Frame = +1 Query: 1 RLPLDLDNNHLLSIAEKFRGLSIFRLQSCCLVIGEGLKNLGVALSDDLEELALINCDVID 180 RLPLDL N+HLL+IA+ RGLS RLQSCCLV G+GLK+L +A+ + LEELALINCDV++ Sbjct: 160 RLPLDLHNSHLLAIAQNCRGLSCIRLQSCCLVTGDGLKSLVIAMGNGLEELALINCDVVE 219 Query: 181 RERGLLSTLGQNLRKLRKLDLSHNDLLPDKELMSMLVSTNYLQELKLRGCGGLTNAALVT 360 R G+L+TLGQNL+ LRKLDLS+N++L DKE +SMLVS NYL +L+LRGC LT AALV+ Sbjct: 220 RVPGMLTTLGQNLKGLRKLDLSYNEMLLDKEFISMLVSCNYLIDLRLRGCRRLTGAALVS 279 Query: 361 MLKNCEHLESVDIMNCCRIEEDAVELFVLNSPRLRLLQIEKCKLS 495 +KNC++LE++DIMNC I+ DAVE FVLNS RLR L +E+ KLS Sbjct: 280 TIKNCKYLENLDIMNCSGIKADAVEAFVLNSRRLRHLLVEESKLS 324 >ref|XP_002272892.1| PREDICTED: SCF E3 ubiquitin ligase complex F-box protein grrA [Vitis vinifera] Length = 470 Score = 216 bits (550), Expect = 3e-54 Identities = 109/165 (66%), Positives = 137/165 (83%) Frame = +1 Query: 1 RLPLDLDNNHLLSIAEKFRGLSIFRLQSCCLVIGEGLKNLGVALSDDLEELALINCDVID 180 RLPLDL N+HLL+IA+ RGLS RLQSCCLV G+GLK+L +A+ + LEELALINCDV++ Sbjct: 289 RLPLDLHNSHLLAIAQNCRGLSCIRLQSCCLVTGDGLKSLVIAMGNGLEELALINCDVVE 348 Query: 181 RERGLLSTLGQNLRKLRKLDLSHNDLLPDKELMSMLVSTNYLQELKLRGCGGLTNAALVT 360 R G+L+TLGQNL+ LRKLDLS+N++L DKE +SMLVS NYL +L+LRGC LT AALV+ Sbjct: 349 RVPGMLTTLGQNLKGLRKLDLSYNEMLLDKEFISMLVSCNYLIDLRLRGCRRLTGAALVS 408 Query: 361 MLKNCEHLESVDIMNCCRIEEDAVELFVLNSPRLRLLQIEKCKLS 495 +KNC++LE++DIMNC I+ DAVE FVLNS RLR L +E+ KLS Sbjct: 409 TIKNCKYLENLDIMNCSGIKADAVEAFVLNSRRLRHLLVEESKLS 453 >emb|CAN59886.1| hypothetical protein VITISV_026168 [Vitis vinifera] Length = 1027 Score = 216 bits (550), Expect = 3e-54 Identities = 109/165 (66%), Positives = 136/165 (82%) Frame = +1 Query: 1 RLPLDLDNNHLLSIAEKFRGLSIFRLQSCCLVIGEGLKNLGVALSDDLEELALINCDVID 180 RLPLDL N+HLL+IA+ RGLS RLQSCCLV G+GLK+L +A+ + LEELALINCDV++ Sbjct: 846 RLPLDLHNSHLLAIAQNCRGLSCIRLQSCCLVTGDGLKSLVIAMGNGLEELALINCDVVE 905 Query: 181 RERGLLSTLGQNLRKLRKLDLSHNDLLPDKELMSMLVSTNYLQELKLRGCGGLTNAALVT 360 R G+L+TLGQNL+ LRKLDLS+N++L DKE +SMLVS NYL +L+LRGC LT AALV+ Sbjct: 906 RVPGMLTTLGQNLKGLRKLDLSYNEMLLDKEFISMLVSCNYLIDLRLRGCRRLTGAALVS 965 Query: 361 MLKNCEHLESVDIMNCCRIEEDAVELFVLNSPRLRLLQIEKCKLS 495 +KNC++LE +DIMNC I+ DAVE FVLNS RLR L +E+ KLS Sbjct: 966 TIKNCKYLEXLDIMNCSGIKADAVEAFVLNSRRLRXLLVEESKLS 1010