BLASTX nr result

ID: Panax21_contig00026712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026712
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin...   186   2e-45
gb|AFK45499.1| unknown [Lotus japonicus]                              184   6e-45
ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucu...   183   1e-44
ref|XP_002512309.1| histone h2a, putative [Ricinus communis] gi|...   183   1e-44
gb|AEQ33640.1| histone H2A [Lycium barbarum]                          183   1e-44

>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
           gi|255625587|gb|ACU13138.1| unknown [Glycine max]
          Length = 140

 Score =  186 bits (472), Expect = 2e-45
 Identities = 96/133 (72%), Positives = 103/133 (77%)
 Frame = +1

Query: 10  MSSTAGKGIAGRGKSKGTKSVSRSSKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXX 189
           MSST G    GRGK K +KSVSRS KAGLQFPVGRIARFLKAG+YA+RVG+G+PVY    
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 190 XXXXXXXXXXXXXXXXRDNKKSRIIPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHST 369
                           RDNKK+RI+PRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH T
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 370 LLPKKAGKGKGEI 408
           LLPKK GKGKGEI
Sbjct: 121 LLPKKVGKGKGEI 133


>gb|AFK45499.1| unknown [Lotus japonicus]
          Length = 141

 Score =  184 bits (467), Expect = 6e-45
 Identities = 97/134 (72%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
 Frame = +1

Query: 10  MSSTAGKGI-AGRGKSKGTKSVSRSSKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXX 186
           MSST G     GRGK K  KSVSRS KAGLQFPVGRIARFLKAG+YA+RVG+G+PVY   
Sbjct: 1   MSSTGGNNTKGGRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 60

Query: 187 XXXXXXXXXXXXXXXXXRDNKKSRIIPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHS 366
                            RDNKK+RI+PRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH 
Sbjct: 61  VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 120

Query: 367 TLLPKKAGKGKGEI 408
           TLLPKKAGKGKGEI
Sbjct: 121 TLLPKKAGKGKGEI 134


>ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus]
           gi|449485770|ref|XP_004157270.1| PREDICTED: probable
           histone H2AXb-like [Cucumis sativus]
          Length = 140

 Score =  183 bits (465), Expect = 1e-44
 Identities = 95/133 (71%), Positives = 102/133 (76%)
 Frame = +1

Query: 10  MSSTAGKGIAGRGKSKGTKSVSRSSKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXX 189
           MSST G    GRGK K TKSVSRS KAGLQFPVGRIARFLKAG+YA+RVG+G+PVY    
Sbjct: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 190 XXXXXXXXXXXXXXXXRDNKKSRIIPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHST 369
                           RDNKK+RI+PRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH T
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 370 LLPKKAGKGKGEI 408
           LLPKK GK KG+I
Sbjct: 121 LLPKKVGKDKGDI 133


>ref|XP_002512309.1| histone h2a, putative [Ricinus communis]
           gi|223548270|gb|EEF49761.1| histone h2a, putative
           [Ricinus communis]
          Length = 140

 Score =  183 bits (465), Expect = 1e-44
 Identities = 94/133 (70%), Positives = 103/133 (77%)
 Frame = +1

Query: 10  MSSTAGKGIAGRGKSKGTKSVSRSSKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXX 189
           MSST G    GRGK K +KSVSRS KAGLQFPVGRIARFLKAG+YA+RVG+G+PVY    
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 190 XXXXXXXXXXXXXXXXRDNKKSRIIPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHST 369
                           RDNKK+RI+PRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH T
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 370 LLPKKAGKGKGEI 408
           LLPKK GKGKG++
Sbjct: 121 LLPKKIGKGKGDM 133


>gb|AEQ33640.1| histone H2A [Lycium barbarum]
          Length = 142

 Score =  183 bits (464), Expect = 1e-44
 Identities = 94/129 (72%), Positives = 102/129 (79%)
 Frame = +1

Query: 22  AGKGIAGRGKSKGTKSVSRSSKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXXXXXX 201
           AGKG AGRGK K +KSVSRSSKAGLQFPVGRIARFLKAG+YA+RVG+G+PVY        
Sbjct: 7   AGKGGAGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 66

Query: 202 XXXXXXXXXXXXRDNKKSRIIPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHSTLLPK 381
                       RDNKK+RI+PRHIQLAVRNDEELSKLLG VTIANGGVLPNIH  LLPK
Sbjct: 67  AAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGHVTIANGGVLPNIHQNLLPK 126

Query: 382 KAGKGKGEI 408
           KAG GKG+I
Sbjct: 127 KAGSGKGDI 135


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