BLASTX nr result

ID: Panax21_contig00026711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026711
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45499.1| unknown [Lotus japonicus]                              157   6e-37
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin...   156   2e-36
ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|...   156   2e-36
ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|3555008...   155   4e-36
ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250...   155   4e-36

>gb|AFK45499.1| unknown [Lotus japonicus]
          Length = 141

 Score =  157 bits (398), Expect = 6e-37
 Identities = 80/107 (74%), Positives = 85/107 (79%)
 Frame = +1

Query: 88  AGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXXXXXXXXXXXXXXXXXXRDNKKTRIIP 267
           AGLQFPVGRIARFLKAG+YA+RVG+G+PVY                    RDNKK RI+P
Sbjct: 28  AGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVP 87

Query: 268 RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHSTLLPKKAGKGKGEI 408
           RHIQLAVRNDEELSKLLGSVTIANGGVLPNIH TLLPKKAGKGKGEI
Sbjct: 88  RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKAGKGKGEI 134


>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
           gi|255625587|gb|ACU13138.1| unknown [Glycine max]
          Length = 140

 Score =  156 bits (394), Expect = 2e-36
 Identities = 79/107 (73%), Positives = 84/107 (78%)
 Frame = +1

Query: 88  AGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXXXXXXXXXXXXXXXXXXRDNKKTRIIP 267
           AGLQFPVGRIARFLKAG+YA+RVG+G+PVY                    RDNKK RI+P
Sbjct: 27  AGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVP 86

Query: 268 RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHSTLLPKKAGKGKGEI 408
           RHIQLAVRNDEELSKLLGSVTIANGGVLPNIH TLLPKK GKGKGEI
Sbjct: 87  RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGEI 133


>ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera]
           gi|147815277|emb|CAN70026.1| hypothetical protein
           VITISV_030174 [Vitis vinifera]
          Length = 139

 Score =  156 bits (394), Expect = 2e-36
 Identities = 79/107 (73%), Positives = 84/107 (78%)
 Frame = +1

Query: 88  AGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXXXXXXXXXXXXXXXXXXRDNKKTRIIP 267
           AGLQFPVGRIARFLKAG+YA+RVG+G+PVY                    RDNKK RI+P
Sbjct: 26  AGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVP 85

Query: 268 RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHSTLLPKKAGKGKGEI 408
           RHIQLAVRNDEELSKLLGSVTIANGGVLPNIH TLLPKK GKGKGEI
Sbjct: 86  RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKTGKGKGEI 132


>ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|355500896|gb|AES82099.1|
           Histone H2A [Medicago truncatula]
           gi|388495504|gb|AFK35818.1| unknown [Medicago
           truncatula]
          Length = 142

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/107 (72%), Positives = 84/107 (78%)
 Frame = +1

Query: 88  AGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXXXXXXXXXXXXXXXXXXRDNKKTRIIP 267
           AGLQFPVGRIARFLKAG+YA+RVG+G+PVY                    RDNKK RI+P
Sbjct: 29  AGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVP 88

Query: 268 RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHSTLLPKKAGKGKGEI 408
           RHIQLAVRNDEELSKLLG+VTIANGGVLPNIH TLLPKK GKGKGEI
Sbjct: 89  RHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQTLLPKKVGKGKGEI 135


>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250|gb|EEE76615.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/107 (72%), Positives = 84/107 (78%)
 Frame = +1

Query: 88  AGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXXXXXXXXXXXXXXXXXXRDNKKTRIIP 267
           AGLQFPVGRIARFLKAG+YA+RVG+G+PVY                    RDNKK RI+P
Sbjct: 29  AGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVP 88

Query: 268 RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHSTLLPKKAGKGKGEI 408
           RHIQLAVRNDEELSKLLGSVTIANGGVLPNIH TLLPKK GKGKG+I
Sbjct: 89  RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDI 135


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