BLASTX nr result

ID: Panax21_contig00026709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026709
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278055.2| PREDICTED: tubulin--tyrosine ligase-like pro...   214   6e-54
emb|CAN82450.1| hypothetical protein VITISV_006435 [Vitis vinifera]   214   6e-54
ref|XP_003546508.1| PREDICTED: tubulin--tyrosine ligase-like pro...   197   7e-49
dbj|BAJ96002.1| predicted protein [Hordeum vulgare subsp. vulgare]    196   1e-48
ref|XP_002326123.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47

>ref|XP_002278055.2| PREDICTED: tubulin--tyrosine ligase-like protein 12-like [Vitis
           vinifera] gi|297738564|emb|CBI27809.3| unnamed protein
           product [Vitis vinifera]
          Length = 866

 Score =  214 bits (545), Expect = 6e-54
 Identities = 99/136 (72%), Positives = 115/136 (84%)
 Frame = -1

Query: 409 SFSILWPTKTIQRGEECTLDFLFGIGEEKQRSARLTAWFHTPKNYFIKEYENHRQKLKSS 230
           SFSILWPT+ +Q+G+ECT DFLFGIGE+KQRSARLTAWFHTP+NYFI EYE H QKL+S 
Sbjct: 453 SFSILWPTQNVQKGDECTRDFLFGIGEDKQRSARLTAWFHTPQNYFIHEYEKHCQKLQSK 512

Query: 229 SCASPTIKSPSTCSMLHSDGSALRVYTDIPQVEEFLTHPEFVITTDPKDAEIIWTGMQVD 50
            C SP+IK  +    + S G ALRVYTDIPQVEEFLT PEF+ITTDPKDA+IIWT MQ+D
Sbjct: 513 CCLSPSIKPSTDRCSISSGGHALRVYTDIPQVEEFLTRPEFLITTDPKDADIIWTSMQID 572

Query: 49  EEMKTAAGLTDQQYIN 2
           E+ + AAG+TDQQYIN
Sbjct: 573 EDTRKAAGITDQQYIN 588


>emb|CAN82450.1| hypothetical protein VITISV_006435 [Vitis vinifera]
          Length = 870

 Score =  214 bits (545), Expect = 6e-54
 Identities = 99/136 (72%), Positives = 115/136 (84%)
 Frame = -1

Query: 409 SFSILWPTKTIQRGEECTLDFLFGIGEEKQRSARLTAWFHTPKNYFIKEYENHRQKLKSS 230
           SFSILWPT+ +Q+G+ECT DFLFGIGE+KQRSARLTAWFHTP+NYFI EYE H QKL+S 
Sbjct: 457 SFSILWPTQNVQKGDECTRDFLFGIGEDKQRSARLTAWFHTPQNYFIHEYEKHCQKLQSK 516

Query: 229 SCASPTIKSPSTCSMLHSDGSALRVYTDIPQVEEFLTHPEFVITTDPKDAEIIWTGMQVD 50
            C SP+IK  +    + S G ALRVYTDIPQVEEFLT PEF+ITTDPKDA+IIWT MQ+D
Sbjct: 517 CCLSPSIKPSTDRCSISSGGHALRVYTDIPQVEEFLTRPEFLITTDPKDADIIWTSMQID 576

Query: 49  EEMKTAAGLTDQQYIN 2
           E+ + AAG+TDQQYIN
Sbjct: 577 EDTRKAAGITDQQYIN 592


>ref|XP_003546508.1| PREDICTED: tubulin--tyrosine ligase-like protein 12-like isoform 1
           [Glycine max]
          Length = 874

 Score =  197 bits (501), Expect = 7e-49
 Identities = 92/136 (67%), Positives = 108/136 (79%)
 Frame = -1

Query: 409 SFSILWPTKTIQRGEECTLDFLFGIGEEKQRSARLTAWFHTPKNYFIKEYENHRQKLKSS 230
           SFSILWPT+ + +G+ECT DFL GIGE+KQRSARLTAWFHTP+NYFI  YE H QKL S+
Sbjct: 461 SFSILWPTQNVCKGDECTRDFLLGIGEDKQRSARLTAWFHTPENYFIHAYEKHHQKLLST 520

Query: 229 SCASPTIKSPSTCSMLHSDGSALRVYTDIPQVEEFLTHPEFVITTDPKDAEIIWTGMQVD 50
           S   PT +S  T S+    G  LRVYTDIP VEE+LTHP+F IT +PKDA+IIWT +QVD
Sbjct: 521 SLMLPTFQSSETRSIHQPGGRPLRVYTDIPHVEEYLTHPKFAITKEPKDADIIWTSVQVD 580

Query: 49  EEMKTAAGLTDQQYIN 2
           E+MK A G+TDQQYIN
Sbjct: 581 EDMKKATGITDQQYIN 596


>dbj|BAJ96002.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 872

 Score =  196 bits (499), Expect = 1e-48
 Identities = 91/136 (66%), Positives = 115/136 (84%)
 Frame = -1

Query: 409 SFSILWPTKTIQRGEECTLDFLFGIGEEKQRSARLTAWFHTPKNYFIKEYENHRQKLKSS 230
           S++ILWP   +  GEECT DFLFGIGE+KQRSARLTAWFHTP+NYFI+E+  ++++L+S+
Sbjct: 460 SYTILWPICDVHTGEECTRDFLFGIGEDKQRSARLTAWFHTPENYFIQEFRKYQEQLQST 519

Query: 229 SCASPTIKSPSTCSMLHSDGSALRVYTDIPQVEEFLTHPEFVITTDPKDAEIIWTGMQVD 50
           S   PT ++PST S+  SDG  LRV+TDIPQVEEFLT PEFV+TTDPKDA+IIW GMQ+D
Sbjct: 520 SIC-PTKETPSTRSVRPSDGRPLRVFTDIPQVEEFLTRPEFVLTTDPKDADIIWAGMQID 578

Query: 49  EEMKTAAGLTDQQYIN 2
            E+K++ GLTDQQY+N
Sbjct: 579 SELKSSLGLTDQQYMN 594


>ref|XP_002326123.1| predicted protein [Populus trichocarpa] gi|222833316|gb|EEE71793.1|
           predicted protein [Populus trichocarpa]
          Length = 868

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/136 (66%), Positives = 112/136 (82%)
 Frame = -1

Query: 409 SFSILWPTKTIQRGEECTLDFLFGIGEEKQRSARLTAWFHTPKNYFIKEYENHRQKLKSS 230
           S+SILWP + +Q G+ECT DFLFGIGE+KQRSARLTA+FHTP+ YFI+EYE   QKL+S 
Sbjct: 455 SYSILWPIQNVQNGDECTRDFLFGIGEDKQRSARLTAYFHTPQYYFIQEYEKFHQKLQSK 514

Query: 229 SCASPTIKSPSTCSMLHSDGSALRVYTDIPQVEEFLTHPEFVITTDPKDAEIIWTGMQVD 50
           S     +KS S+ ++  +DG ALRVYTD+PQVE FLT  EF+ITT+ KDA+IIWTGMQVD
Sbjct: 515 SSTPLPVKSSSSRTLRRTDGCALRVYTDLPQVEGFLTRTEFIITTELKDADIIWTGMQVD 574

Query: 49  EEMKTAAGLTDQQYIN 2
           +++K AAG+TDQQYIN
Sbjct: 575 DDVKRAAGITDQQYIN 590


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