BLASTX nr result

ID: Panax21_contig00026708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026708
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265252.1| PREDICTED: tetrapyrrole-binding protein, chl...   143   1e-32
ref|XP_002533443.1| Tetrapyrrole-binding protein, chloroplast pr...   137   7e-31
ref|XP_002327969.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_002309808.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
gb|AFK45605.1| unknown [Lotus japonicus]                              133   1e-29

>ref|XP_002265252.1| PREDICTED: tetrapyrrole-binding protein, chloroplastic [Vitis
           vinifera] gi|147779401|emb|CAN76796.1| hypothetical
           protein VITISV_030118 [Vitis vinifera]
          Length = 268

 Score =  143 bits (361), Expect = 1e-32
 Identities = 82/157 (52%), Positives = 97/157 (61%), Gaps = 10/157 (6%)
 Frame = -1

Query: 442 MATNSLQSL--HHHTSLPQRRHPTDCHPTTLSSNSLFLKPN--------NPAIXXXXXXX 293
           MATNSLQSL  HHH       H  + HP+T SS  LFLKP         +  +       
Sbjct: 1   MATNSLQSLSNHHHLLKHYHHHSIESHPSTFSS--LFLKPTTNTNTTNLSHTLTTPPTAT 58

Query: 292 XXXXXXXXXXXXXXXXXXXXXXXFDLLQTHLAAQNFRQADEETRRLLIALAGDAAVKRGY 113
                                  +D+LQ HL+++N+RQADEETRRLLI LAG+AAVKRGY
Sbjct: 59  TTTPFALSSTTSSTTPSTSQAISYDVLQQHLSSKNYRQADEETRRLLIVLAGEAAVKRGY 118

Query: 112 VFFSEVQFITESDLKTIDELWKQHSNNKFGYSVQKKI 2
           VFFSEVQFI E+DLK IDELW+QHSNNKFGYSVQ++I
Sbjct: 119 VFFSEVQFIPEADLKAIDELWRQHSNNKFGYSVQRRI 155


>ref|XP_002533443.1| Tetrapyrrole-binding protein, chloroplast precursor, putative
           [Ricinus communis] gi|223526705|gb|EEF28939.1|
           Tetrapyrrole-binding protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 262

 Score =  137 bits (346), Expect = 7e-31
 Identities = 83/155 (53%), Positives = 97/155 (62%), Gaps = 8/155 (5%)
 Frame = -1

Query: 442 MATNSLQSLHH-HTSLPQRRHPTDCHPTTLSSNSLFLKPN--NPAIXXXXXXXXXXXXXX 272
           MATNSLQSLHH H SL + +H       T + +SLFLKP   N ++              
Sbjct: 1   MATNSLQSLHHNHHSLLKLQHSD-----TTTPSSLFLKPTTTNTSLSLSISSSSTTTPTT 55

Query: 271 XXXXXXXXXXXXXXXXF-----DLLQTHLAAQNFRQADEETRRLLIALAGDAAVKRGYVF 107
                                 DLLQ HL+AQNFRQADEETRRLLI LAG+A  KRGYVF
Sbjct: 56  TTTFSISPTTSTTPSTSQTFSLDLLQQHLSAQNFRQADEETRRLLIVLAGEATQKRGYVF 115

Query: 106 FSEVQFITESDLKTIDELWKQHSNNKFGYSVQKKI 2
           FSEVQFI+E+DLK IDELWK++SNNKFGYS+QK+I
Sbjct: 116 FSEVQFISENDLKAIDELWKKYSNNKFGYSIQKRI 150


>ref|XP_002327969.1| predicted protein [Populus trichocarpa] gi|222837378|gb|EEE75757.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  137 bits (345), Expect = 9e-31
 Identities = 81/154 (52%), Positives = 95/154 (61%), Gaps = 7/154 (4%)
 Frame = -1

Query: 442 MATNSLQSLHHHTSLPQRRHPTDCHPTTLSSNSLFLKPN-------NPAIXXXXXXXXXX 284
           MAT+SL+SL+HH SL  + HP+D  P +    SLFLKP        + ++          
Sbjct: 1   MATSSLRSLNHHHSL-LKFHPSDTTPPS----SLFLKPTTSISVNTDTSLSLSISSPTIT 55

Query: 283 XXXXXXXXXXXXXXXXXXXXFDLLQTHLAAQNFRQADEETRRLLIALAGDAAVKRGYVFF 104
                                DLLQ HL+ QNFR+ADEETRRLLI LAG+AA  RGYVFF
Sbjct: 56  TAYSVSPTTSTTPSTSKTDSLDLLQQHLSNQNFREADEETRRLLIVLAGEAAQTRGYVFF 115

Query: 103 SEVQFITESDLKTIDELWKQHSNNKFGYSVQKKI 2
           SEVQFI+E DLK IDELWK HSNNKFGYSVQK+I
Sbjct: 116 SEVQFISEEDLKDIDELWKNHSNNKFGYSVQKRI 149


>ref|XP_002309808.1| predicted protein [Populus trichocarpa] gi|222852711|gb|EEE90258.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  136 bits (342), Expect = 2e-30
 Identities = 82/153 (53%), Positives = 93/153 (60%), Gaps = 5/153 (3%)
 Frame = -1

Query: 445 LMATNSLQSLHHHTSLPQRRHPTDCHPTTLSSNSLFLKPNNPA-----IXXXXXXXXXXX 281
           + ATNSLQSLHHH SL  +  P+D  P +    SLFLKP         I           
Sbjct: 1   MAATNSLQSLHHHHSL-LKFLPSDTSPPS----SLFLKPTTSISTATNISLSLSISTTTT 55

Query: 280 XXXXXXXXXXXXXXXXXXXFDLLQTHLAAQNFRQADEETRRLLIALAGDAAVKRGYVFFS 101
                               +LLQ HL+ QNFR+ADEETRRLLI LAG+AA KRGYVFFS
Sbjct: 56  AYSISPATSTAPSTSKTFSLNLLQQHLSNQNFREADEETRRLLIVLAGEAAQKRGYVFFS 115

Query: 100 EVQFITESDLKTIDELWKQHSNNKFGYSVQKKI 2
           EVQFI E DLK IDELWK++SNNKFGYSVQK+I
Sbjct: 116 EVQFIPEQDLKDIDELWKKYSNNKFGYSVQKRI 148


>gb|AFK45605.1| unknown [Lotus japonicus]
          Length = 272

 Score =  133 bits (335), Expect = 1e-29
 Identities = 77/157 (49%), Positives = 99/157 (63%), Gaps = 10/157 (6%)
 Frame = -1

Query: 442 MATNSLQSLHHHTSLPQRRHPTDCHPTTLSSNSLFLKP----------NNPAIXXXXXXX 293
           MATN L S+HH  SL +  H ++  P+TLS+ SLFLKP          +N  +       
Sbjct: 1   MATNYLHSIHH--SLIKHHHHSESPPSTLSA-SLFLKPTNTKTSSITLSNSLLPSPTSNS 57

Query: 292 XXXXXXXXXXXXXXXXXXXXXXXFDLLQTHLAAQNFRQADEETRRLLIALAGDAAVKRGY 113
                                   DLL+  L+A+NFR+AD+ETRRLLIALAG+ A+KRGY
Sbjct: 58  SVTFSVSQTTSSTTPSTTSKSTSLDLLRELLSARNFREADDETRRLLIALAGEPAIKRGY 117

Query: 112 VFFSEVQFITESDLKTIDELWKQHSNNKFGYSVQKKI 2
           VFFSEVQFI+E+DLK IDELW++HS+N+FGYSVQK+I
Sbjct: 118 VFFSEVQFISETDLKAIDELWREHSDNRFGYSVQKRI 154


Top