BLASTX nr result

ID: Panax21_contig00026706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026706
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18550.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [V...   135   3e-30
gb|ABK96202.1| unknown [Populus trichocarpa]                          118   6e-25
ref|XP_002300925.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
gb|AAC04862.1| shoot-forming PKSF1 [Paulownia kawakamii]               95   5e-18

>emb|CBI18550.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/107 (68%), Positives = 78/107 (72%)
 Frame = -1

Query: 351 LRLQAMEQHAHLRDALNETLREEVQRLKIATGQVPAANGNSFNRALPPQFSSHPQSFHHF 172
           LRLQAMEQ A LR+ALNE LREEVQRLKIATGQ+PA NGNSFNR LPPQFSSHPQ+ HHF
Sbjct: 100 LRLQAMEQQASLREALNEALREEVQRLKIATGQIPAVNGNSFNRGLPPQFSSHPQALHHF 159

Query: 171 GNHXXXXXXXXXXXXXXXQLHMPHSTSKNNQTRSVQPQPSFADFNQR 31
           G                 QLHMP S S NNQ+ + QPQPSF DFNQR
Sbjct: 160 G-----------AQQQQQQLHMPQS-STNNQSLNGQPQPSFLDFNQR 194


>ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [Vitis vinifera]
          Length = 350

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/107 (68%), Positives = 78/107 (72%)
 Frame = -1

Query: 351 LRLQAMEQHAHLRDALNETLREEVQRLKIATGQVPAANGNSFNRALPPQFSSHPQSFHHF 172
           LRLQAMEQ A LR+ALNE LREEVQRLKIATGQ+PA NGNSFNR LPPQFSSHPQ+ HHF
Sbjct: 255 LRLQAMEQQASLREALNEALREEVQRLKIATGQIPAVNGNSFNRGLPPQFSSHPQALHHF 314

Query: 171 GNHXXXXXXXXXXXXXXXQLHMPHSTSKNNQTRSVQPQPSFADFNQR 31
           G                 QLHMP S S NNQ+ + QPQPSF DFNQR
Sbjct: 315 G-----------AQQQQQQLHMPQS-STNNQSLNGQPQPSFLDFNQR 349


>gb|ABK96202.1| unknown [Populus trichocarpa]
          Length = 340

 Score =  118 bits (295), Expect = 6e-25
 Identities = 68/107 (63%), Positives = 72/107 (67%)
 Frame = -1

Query: 351 LRLQAMEQHAHLRDALNETLREEVQRLKIATGQVPAANGNSFNRALPPQFSSHPQSFHHF 172
           LRLQAMEQ AHLRDALNE LREEVQRLKIATGQVPA NGN FNR LPPQFSSH Q    F
Sbjct: 246 LRLQAMEQQAHLRDALNEALREEVQRLKIATGQVPAVNGNPFNRGLPPQFSSH-QGLQTF 304

Query: 171 GNHXXXXXXXXXXXXXXXQLHMPHSTSKNNQTRSVQPQPSFADFNQR 31
           GN                QLHMP   S   QT + QP PSF++F+QR
Sbjct: 305 GNQ-----------QAQQQLHMP-QPSTTGQTHNGQPHPSFSNFSQR 339


>ref|XP_002300925.1| predicted protein [Populus trichocarpa] gi|222842651|gb|EEE80198.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  108 bits (270), Expect = 5e-22
 Identities = 64/100 (64%), Positives = 65/100 (65%)
 Frame = -1

Query: 351 LRLQAMEQHAHLRDALNETLREEVQRLKIATGQVPAANGNSFNRALPPQFSSHPQSFHHF 172
           LRLQAMEQ AHLRDALNE LREEVQRLKIATGQVPA NGN FNR LPPQFSSH Q    F
Sbjct: 84  LRLQAMEQQAHLRDALNEALREEVQRLKIATGQVPAVNGNPFNRGLPPQFSSH-QGLQTF 142

Query: 171 GNHXXXXXXXXXXXXXXXQLHMPHSTSKNNQTRSVQPQPS 52
           GN                QLHMP   S   QT + QP PS
Sbjct: 143 GNQ-----------QAQQQLHMP-QPSTTGQTHNGQPHPS 170


>gb|AAC04862.1| shoot-forming PKSF1 [Paulownia kawakamii]
          Length = 340

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 57/111 (51%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
 Frame = -1

Query: 351 LRLQAMEQHAHLRDALNETLREEVQRLKIATGQVPAANGNSFNRALPPQFSSHPQSFHHF 172
           ++LQAMEQ AHLRDALNE L++E+Q LKIA GQVP  NGN  NR    QFSS P +  +F
Sbjct: 232 MKLQAMEQQAHLRDALNEALKDELQWLKIAAGQVPGVNGN--NRGSFSQFSSQPPTIRYF 289

Query: 171 GNH----XXXXXXXXXXXXXXXQLHMPHSTSKNNQTRSVQPQPSFADFNQR 31
           GNH                    LHMPHS S NN     Q Q SF DFN R
Sbjct: 290 GNHLAQQQQQQQQQQQQQQQQQPLHMPHS-SANNPRLGGQSQLSFQDFNHR 339


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