BLASTX nr result

ID: Panax21_contig00026697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026697
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556534.1| PREDICTED: syntaxin-43-like [Glycine max]          59   3e-07
ref|XP_002874333.1| hypothetical protein ARALYDRAFT_910771 [Arab...    59   4e-07
ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|...    59   5e-07
pir||T01773 syntaxin homolog A_IG002P16.16 - Arabidopsis thalian...    58   9e-07
ref|NP_198050.1| syntaxin-41 [Arabidopsis thaliana] gi|79328799|...    58   9e-07

>ref|XP_003556534.1| PREDICTED: syntaxin-43-like [Glycine max]
          Length = 326

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = -2

Query: 179 MATRNRTFLYKKYRDSIKTVRXXXXXXXXXXXXXXP---VIELATVSLIKPSRSYAPLST 9
           MATRNRT L++K+RD++K+VR                  VIELAT S + P+RSYAPLST
Sbjct: 1   MATRNRTLLFRKHRDALKSVRVPSISSPPFTASGAGGGPVIELATTSFLNPNRSYAPLST 60

Query: 8   ED 3
           ED
Sbjct: 61  ED 62


>ref|XP_002874333.1| hypothetical protein ARALYDRAFT_910771 [Arabidopsis lyrata subsp.
           lyrata] gi|297320170|gb|EFH50592.1| hypothetical protein
           ARALYDRAFT_910771 [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = -2

Query: 179 MATRNRTFLYKKYRDSIKTVRXXXXXXXXXXXXXXPV---IELATVSLIKPSRSYAPLST 9
           MATRNRT L++KYR+S+++VR               V   IE+AT SL+ P+RSYAP+ST
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMATTSLLNPNRSYAPVST 60

Query: 8   ED 3
           ED
Sbjct: 61  ED 62


>ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|gb|AES61446.1| Syntaxin
           [Medicago truncatula]
          Length = 376

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -2

Query: 179 MATRNRTFLYKKYRDSIKTVRXXXXXXXXXXXXXXP-VIELATVSLIKPSRSYAPLSTED 3
           MATRNRT +++KYRD++K+VR                VIEL + SL+ P+RSYAPLST+D
Sbjct: 1   MATRNRTLIFRKYRDALKSVRAPSSSSPPSTSSRGGPVIELVSTSLLNPNRSYAPLSTDD 60


>pir||T01773 syntaxin homolog A_IG002P16.16 - Arabidopsis thaliana
           gi|2191179|gb|AAB61065.1| contains similarity to
           syntaxin [Arabidopsis thaliana]
          Length = 307

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = -2

Query: 179 MATRNRTFLYKKYRDSIKTVRXXXXXXXXXXXXXXPV---IELATVSLIKPSRSYAPLST 9
           MATRNRT L++KYR+S+++VR               V   IE+A+ SL+ P+RSYAP+ST
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60

Query: 8   ED 3
           ED
Sbjct: 61  ED 62


>ref|NP_198050.1| syntaxin-41 [Arabidopsis thaliana] gi|79328799|ref|NP_001031950.1|
           syntaxin-41 [Arabidopsis thaliana]
           gi|28380151|sp|O65359.1|SYP41_ARATH RecName:
           Full=Syntaxin-41; Short=AtSYP41; Short=AtTLG2a
           gi|3172538|gb|AAC27707.1| syntaxin of plants 41
           [Arabidopsis thaliana] gi|332006253|gb|AED93636.1|
           syntaxin-41 [Arabidopsis thaliana]
           gi|332006254|gb|AED93637.1| syntaxin-41 [Arabidopsis
           thaliana]
          Length = 322

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = -2

Query: 179 MATRNRTFLYKKYRDSIKTVRXXXXXXXXXXXXXXPV---IELATVSLIKPSRSYAPLST 9
           MATRNRT L++KYR+S+++VR               V   IE+A+ SL+ P+RSYAP+ST
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60

Query: 8   ED 3
           ED
Sbjct: 61  ED 62


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