BLASTX nr result

ID: Panax21_contig00026686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026686
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vit...   209   1e-52
ref|XP_002315820.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_004171159.1| PREDICTED: TIMELESS-interacting protein-like...   197   7e-49
ref|XP_004139395.1| PREDICTED: TIMELESS-interacting protein-like...   197   7e-49
ref|XP_002518811.1| nucleic acid binding protein, putative [Rici...   197   7e-49

>ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vitis vinifera]
           gi|297738277|emb|CBI27478.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  209 bits (533), Expect = 1e-52
 Identities = 103/163 (63%), Positives = 118/163 (72%), Gaps = 3/163 (1%)
 Frame = -3

Query: 483 SGAAPTGCYKCGRPGHWSRDCHS---NPISGSNTDLNNSKSTPYAFKTGGDPGTVKSTEX 313
           SGAAPTGCYKCGRPGHWSRDC S   NP    N + N+        K        KS+E 
Sbjct: 4   SGAAPTGCYKCGRPGHWSRDCPSSNTNPNPNPNPNPNSQNQYSSFNKGTASKPLAKSSEK 63

Query: 312 XXXXXXXXXXXXPEVLLSNDGLGYVLRHFPQAFKYHGRGHEVRDLGNLLGLYSEWHSHLL 133
                       PE+LLS++GLGYVLRHFP AFK+ GRGHEV DLGNL+GLYSEWHSHLL
Sbjct: 64  PKKAPRTRPNLTPELLLSDNGLGYVLRHFPGAFKFRGRGHEVSDLGNLIGLYSEWHSHLL 123

Query: 132 PYYSFDQFVHKVEQVGSTKRVKLCLKELQERVAHGGDPTKLHE 4
           PYYSFDQFVHKVE+VG+TKRVK+C++EL+ERV +GGD TK HE
Sbjct: 124 PYYSFDQFVHKVEKVGTTKRVKICIRELRERVENGGDLTKFHE 166


>ref|XP_002315820.1| predicted protein [Populus trichocarpa] gi|222864860|gb|EEF01991.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score =  203 bits (517), Expect = 1e-50
 Identities = 102/171 (59%), Positives = 119/171 (69%), Gaps = 11/171 (6%)
 Frame = -3

Query: 483 SGAAPTGCYKCGRPGHWSRDC-----HSNPISGSNTDL-----NNSKSTPYAFKTGGDPG 334
           + AAPTGCYKCGRPGHWSRDC     + NP S  N+       NNS S    + +G +  
Sbjct: 4   TNAAPTGCYKCGRPGHWSRDCPDSNPNPNPSSNPNSPRSFPSNNNSSSNNSNYFSGSNSK 63

Query: 333 TVKSTEXXXXXXXXXXXXXPEVLLSND-GLGYVLRHFPQAFKYHGRGHEVRDLGNLLGLY 157
             K+ E             PE+LL  D GLG++LRHFP+ FKY GRGHEV DLGNL+GLY
Sbjct: 64  PAKAAEKPKKVPRSRPKLTPELLLGEDNGLGFILRHFPRNFKYRGRGHEVSDLGNLIGLY 123

Query: 156 SEWHSHLLPYYSFDQFVHKVEQVGSTKRVKLCLKELQERVAHGGDPTKLHE 4
           SEWHSHLLPYYSFDQFVHKVEQV +TKR K+C++EL+ERVA GGDPTKL E
Sbjct: 124 SEWHSHLLPYYSFDQFVHKVEQVAATKRAKMCVRELRERVASGGDPTKLRE 174


>ref|XP_004171159.1| PREDICTED: TIMELESS-interacting protein-like [Cucumis sativus]
          Length = 284

 Score =  197 bits (501), Expect = 7e-49
 Identities = 96/157 (61%), Positives = 112/157 (71%)
 Frame = -3

Query: 474 APTGCYKCGRPGHWSRDCHSNPISGSNTDLNNSKSTPYAFKTGGDPGTVKSTEXXXXXXX 295
           APTGC+KCG+PGHWSRDC   P S  N +  ++ STP        P   K+ E       
Sbjct: 10  APTGCFKCGKPGHWSRDC---PSSAPNPNPTSNSSTPSFSSPPAAPS--KAVEKPKKAPR 64

Query: 294 XXXXXXPEVLLSNDGLGYVLRHFPQAFKYHGRGHEVRDLGNLLGLYSEWHSHLLPYYSFD 115
                 PE+LLS+DGLGYVLRHFP+AFKY GRGHE+ DL NL+GLY EWHSH+LPYYSF+
Sbjct: 65  TRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFE 124

Query: 114 QFVHKVEQVGSTKRVKLCLKELQERVAHGGDPTKLHE 4
            FVHKVEQV +TKRVK+CL EL+ERVA GGDPTK  E
Sbjct: 125 HFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWRE 161


>ref|XP_004139395.1| PREDICTED: TIMELESS-interacting protein-like [Cucumis sativus]
          Length = 280

 Score =  197 bits (501), Expect = 7e-49
 Identities = 96/157 (61%), Positives = 112/157 (71%)
 Frame = -3

Query: 474 APTGCYKCGRPGHWSRDCHSNPISGSNTDLNNSKSTPYAFKTGGDPGTVKSTEXXXXXXX 295
           APTGC+KCG+PGHWSRDC   P S  N +  ++ STP        P   K+ E       
Sbjct: 10  APTGCFKCGKPGHWSRDC---PSSAPNPNPTSNSSTPSFSSPPAAPS--KAVEKPKKAPR 64

Query: 294 XXXXXXPEVLLSNDGLGYVLRHFPQAFKYHGRGHEVRDLGNLLGLYSEWHSHLLPYYSFD 115
                 PE+LLS+DGLGYVLRHFP+AFKY GRGHE+ DL NL+GLY EWHSH+LPYYSF+
Sbjct: 65  TRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFE 124

Query: 114 QFVHKVEQVGSTKRVKLCLKELQERVAHGGDPTKLHE 4
            FVHKVEQV +TKRVK+CL EL+ERVA GGDPTK  E
Sbjct: 125 HFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWRE 161


>ref|XP_002518811.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223542192|gb|EEF43736.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 267

 Score =  197 bits (501), Expect = 7e-49
 Identities = 98/161 (60%), Positives = 115/161 (71%), Gaps = 3/161 (1%)
 Frame = -3

Query: 477 AAPTGCYKCGRPGHWSRDCHSNPISGSNTDLNNSKSTPYAFKTGGDPGTVKS---TEXXX 307
           AAPTGCYKCGRPGHWSRDC   P S SN + ++S  +   F T     +  S    E   
Sbjct: 6   AAPTGCYKCGRPGHWSRDC---PDSNSNPNPSSSNPSNSKFPTSFPNTSTNSKPVAEKPK 62

Query: 306 XXXXXXXXXXPEVLLSNDGLGYVLRHFPQAFKYHGRGHEVRDLGNLLGLYSEWHSHLLPY 127
                     P++LL +DGLGYVLRHFP+ FKY GRGHEV DLGNL+ LYSEWHS LLPY
Sbjct: 63  KVPRSRPKLTPDILLGDDGLGYVLRHFPRNFKYRGRGHEVSDLGNLIRLYSEWHSRLLPY 122

Query: 126 YSFDQFVHKVEQVGSTKRVKLCLKELQERVAHGGDPTKLHE 4
           YS+D+FVHKVEQV STKRV++CL++L+ERVA GGDP KLHE
Sbjct: 123 YSYDEFVHKVEQVASTKRVRVCLRDLRERVASGGDPMKLHE 163


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