BLASTX nr result

ID: Panax21_contig00026674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026674
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277712.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   111   8e-42
emb|CAN75137.1| hypothetical protein VITISV_040754 [Vitis vinifera]   111   8e-42
emb|CBI23010.3| unnamed protein product [Vitis vinifera]              111   8e-42
ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   111   1e-41
emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]                 110   1e-41

>ref|XP_002277712.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Vitis vinifera]
          Length = 327

 Score =  111 bits (278), Expect(2) = 8e-42
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = +3

Query: 180 GSECVVTGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 335
           GSEC V GDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV
Sbjct: 157 GSECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 208



 Score = 85.9 bits (211), Expect(2) = 8e-42
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   SLELPCKFHLLGCPEIFPYYTKLKHETLCNFRPYNCPYAG 120
           SLELPCK++ LGCPEIFPYY+KLKHE +CNFRPYNCPYAG
Sbjct: 118 SLELPCKYYSLGCPEIFPYYSKLKHEAVCNFRPYNCPYAG 157


>emb|CAN75137.1| hypothetical protein VITISV_040754 [Vitis vinifera]
          Length = 327

 Score =  111 bits (278), Expect(2) = 8e-42
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = +3

Query: 180 GSECVVTGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 335
           GSEC V GDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV
Sbjct: 157 GSECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 208



 Score = 85.9 bits (211), Expect(2) = 8e-42
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   SLELPCKFHLLGCPEIFPYYTKLKHETLCNFRPYNCPYAG 120
           SLELPCK++ LGCPEIFPYY+KLKHE +CNFRPYNCPYAG
Sbjct: 118 SLELPCKYYSLGCPEIFPYYSKLKHEAVCNFRPYNCPYAG 157


>emb|CBI23010.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score =  111 bits (278), Expect(2) = 8e-42
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = +3

Query: 180 GSECVVTGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 335
           GSEC V GDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV
Sbjct: 86  GSECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 137



 Score = 85.9 bits (211), Expect(2) = 8e-42
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   SLELPCKFHLLGCPEIFPYYTKLKHETLCNFRPYNCPYAG 120
           SLELPCK++ LGCPEIFPYY+KLKHE +CNFRPYNCPYAG
Sbjct: 47  SLELPCKYYSLGCPEIFPYYSKLKHEAVCNFRPYNCPYAG 86


>ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223544169|gb|EEF45693.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 346

 Score =  111 bits (278), Expect(2) = 1e-41
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = +3

Query: 180 GSECVVTGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 335
           GSEC V GDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV
Sbjct: 176 GSECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 227



 Score = 85.5 bits (210), Expect(2) = 1e-41
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   SLELPCKFHLLGCPEIFPYYTKLKHETLCNFRPYNCPYAG 120
           SLELPCK++ LGCPEIFPYY+KLKHE +CNFRPYNCPYAG
Sbjct: 137 SLELPCKYYNLGCPEIFPYYSKLKHEAVCNFRPYNCPYAG 176


>emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]
          Length = 324

 Score =  110 bits (275), Expect(2) = 1e-41
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = +3

Query: 180 GSECVVTGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 335
           GSEC V GDIPFLV+HLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV
Sbjct: 154 GSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 205



 Score = 86.3 bits (212), Expect(2) = 1e-41
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +1

Query: 1   SLELPCKFHLLGCPEIFPYYTKLKHETLCNFRPYNCPYAG 120
           SLELPCK++ LGCPEIFPYY+KLKHET+CNFRPY+CPYAG
Sbjct: 115 SLELPCKYYSLGCPEIFPYYSKLKHETICNFRPYSCPYAG 154


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