BLASTX nr result

ID: Panax21_contig00026664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026664
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26412.3| unnamed protein product [Vitis vinifera]               77   2e-12
emb|CAN63578.1| hypothetical protein VITISV_002837 [Vitis vinifera]    71   1e-10
ref|XP_002305692.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>emb|CBI26412.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
 Frame = -2

Query: 498 EPAIATNPVQLTNPPC-FSSVSCESTPIKLPLKSEDLMIETPAQSTPQRSQPSCD-KLKT 325
           E  I   PV L  P    SS +CES  +K P+ S+ LM+ETPAQ TP+RS PSCD KLKT
Sbjct: 244 ESTIIKPPVGLICPQSSVSSSACESPYLKHPMVSDCLMVETPAQLTPKRSMPSCDNKLKT 303

Query: 324 TTILKRTASNMSAKRTLDFTYSEGEDRLLNS 232
            T    T+ +M  KR+LDF+  EG++ +LN+
Sbjct: 304 VTRQMGTSCHMPTKRSLDFSCLEGDESVLNT 334


>emb|CAN63578.1| hypothetical protein VITISV_002837 [Vitis vinifera]
          Length = 516

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = -2

Query: 498 EPAIATNPVQLTNPPC-FSSVSCESTPIKLPLKSEDLMIETPAQSTPQRSQPSCD-KLKT 325
           E  I   PV L  P    SS +CES  +K  + S+ LM+ETPAQ TP+RS PSCD KLKT
Sbjct: 375 ESTIIKPPVGLICPQSSVSSSACESPYLKHRMVSDCLMVETPAQLTPKRSMPSCDNKLKT 434

Query: 324 TTILKRTASNMSAKRTLDFTYSEGEDRLLNS 232
            T    T+ +M  KR+LDF+  E ++ +LN+
Sbjct: 435 VTRQMGTSCHMPTKRSLDFSRLEDDESVLNT 465


>ref|XP_002305692.1| predicted protein [Populus trichocarpa] gi|222848656|gb|EEE86203.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
 Frame = -2

Query: 477 PVQLTNPPCFSSVSCESTPIKLPLKSED-LMIETPAQSTPQRSQPSC-DKLKTTTILKRT 304
           P Q  NP   + V   ++P   P  S D L++ETPAQSTP+R+  S  D+   TT  K+T
Sbjct: 376 PSQPINPEVSADVYTSTSPKCKPDSSVDKLLLETPAQSTPRRAMHSSDDQHMDTTGQKQT 435

Query: 303 ASNMSAKRTLDFTYSEGEDRLLNSTADGILQYEVAPNMIPQGETKSFIEENNIASLAAP- 127
            S   AKR LDF+Y E +         G  +Y              F+ +++   LA   
Sbjct: 436 LSCKPAKRVLDFSYMEAD--------KGASEY------------YEFLHDSSTQPLAGSS 475

Query: 126 --LPKV-SSCCSSSDNVINRSASTSNQQISCCLPDLVAIIDQISQ 1
             L KV  S   SS +     + T +QQ+S  LPDLV+++  I Q
Sbjct: 476 SLLEKVEGSLAHSSVDQKTCQSDTVHQQMSIQLPDLVSLVHHIFQ 520


Top