BLASTX nr result

ID: Panax21_contig00026662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026662
         (1228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28417.3| unnamed protein product [Vitis vinifera]              363   4e-98
ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249...   363   4e-98
ref|XP_002531688.1| conserved hypothetical protein [Ricinus comm...   345   1e-92
ref|XP_002301581.1| predicted protein [Populus trichocarpa] gi|2...   338   1e-90
emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CA...   312   1e-82

>emb|CBI28417.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  363 bits (933), Expect = 4e-98
 Identities = 188/312 (60%), Positives = 227/312 (72%), Gaps = 1/312 (0%)
 Frame = +3

Query: 3    KGGYSYFVFKQLYNSKQFSKLLKLGEEFPEELLSFLKLHQDLLWLHEVFLNQFSSASETL 182
            K G+SYFVF+QLY S+QFSKLL+LGEEF E+L  FL+ HQDL WLHE+FL+QFSSASETL
Sbjct: 944  KAGFSYFVFRQLYESRQFSKLLRLGEEFQEDLSIFLQEHQDLRWLHELFLHQFSSASETL 1003

Query: 183  HLLALSQGDRLISETEGPESYDPVVEXXXXXXXXXXXX-SKIAAVAGKTADYDTKLKRIE 359
             LLALSQ    IS  E   + D                 SKIA +AGK ADY+TK+KRIE
Sbjct: 1004 QLLALSQDGSSISSAEKGINPDSGTSGKKLVERRRLLNLSKIAVLAGKDADYETKIKRIE 1063

Query: 360  ADXXXXXXXXXXXXXXPDDDEEKQTIGQRLLPPHELIELCLTSQNRDLSLFAFDVFAWTS 539
            AD              P D+  ++ + QRLLPP +LIELCL ++  +L L AF+V AWTS
Sbjct: 1064 ADLKILKLQEEIIRLLPSDEVVEKGMEQRLLPPRDLIELCLKAEIPELPLLAFEVLAWTS 1123

Query: 540  SYFLKCNASLLEECWRNAANQDDWEHIYQTSMAKGWGEEETLGVLRDAVLFQASSRCYGP 719
            S F K N SLLEECW+ AANQDDW  +Y+ S+A+GW +E+TL VLR+ +LFQAS+RCYGP
Sbjct: 1124 SSFRKANRSLLEECWKCAANQDDWGKLYEASVAEGWSDEDTLRVLRETMLFQASNRCYGP 1183

Query: 720  KTATFEGGFDEVLPLRQENADLPSLKEMGSSVEAILMQHKNFPDAGKLMLTAIMLGNVQD 899
             T TFEGGFDEVL LRQEN ++P+LKE GSSVE ILMQHK+FPDAGKLMLTA+M+G+V+ 
Sbjct: 1184 GTETFEGGFDEVLVLRQENMEIPNLKESGSSVETILMQHKDFPDAGKLMLTAVMMGSVEI 1243

Query: 900  DSTMEEGPSPME 935
            D    EGPSPME
Sbjct: 1244 DVRSYEGPSPME 1255


>ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249432 isoform 1 [Vitis
            vinifera]
          Length = 1330

 Score =  363 bits (933), Expect = 4e-98
 Identities = 188/312 (60%), Positives = 227/312 (72%), Gaps = 1/312 (0%)
 Frame = +3

Query: 3    KGGYSYFVFKQLYNSKQFSKLLKLGEEFPEELLSFLKLHQDLLWLHEVFLNQFSSASETL 182
            K G+SYFVF+QLY S+QFSKLL+LGEEF E+L  FL+ HQDL WLHE+FL+QFSSASETL
Sbjct: 1019 KAGFSYFVFRQLYESRQFSKLLRLGEEFQEDLSIFLQEHQDLRWLHELFLHQFSSASETL 1078

Query: 183  HLLALSQGDRLISETEGPESYDPVVEXXXXXXXXXXXX-SKIAAVAGKTADYDTKLKRIE 359
             LLALSQ    IS  E   + D                 SKIA +AGK ADY+TK+KRIE
Sbjct: 1079 QLLALSQDGSSISSAEKGINPDSGTSGKKLVERRRLLNLSKIAVLAGKDADYETKIKRIE 1138

Query: 360  ADXXXXXXXXXXXXXXPDDDEEKQTIGQRLLPPHELIELCLTSQNRDLSLFAFDVFAWTS 539
            AD              P D+  ++ + QRLLPP +LIELCL ++  +L L AF+V AWTS
Sbjct: 1139 ADLKILKLQEEIIRLLPSDEVVEKGMEQRLLPPRDLIELCLKAEIPELPLLAFEVLAWTS 1198

Query: 540  SYFLKCNASLLEECWRNAANQDDWEHIYQTSMAKGWGEEETLGVLRDAVLFQASSRCYGP 719
            S F K N SLLEECW+ AANQDDW  +Y+ S+A+GW +E+TL VLR+ +LFQAS+RCYGP
Sbjct: 1199 SSFRKANRSLLEECWKCAANQDDWGKLYEASVAEGWSDEDTLRVLRETMLFQASNRCYGP 1258

Query: 720  KTATFEGGFDEVLPLRQENADLPSLKEMGSSVEAILMQHKNFPDAGKLMLTAIMLGNVQD 899
             T TFEGGFDEVL LRQEN ++P+LKE GSSVE ILMQHK+FPDAGKLMLTA+M+G+V+ 
Sbjct: 1259 GTETFEGGFDEVLVLRQENMEIPNLKESGSSVETILMQHKDFPDAGKLMLTAVMMGSVEI 1318

Query: 900  DSTMEEGPSPME 935
            D    EGPSPME
Sbjct: 1319 DVRSYEGPSPME 1330


>ref|XP_002531688.1| conserved hypothetical protein [Ricinus communis]
            gi|223528664|gb|EEF30679.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1391

 Score =  345 bits (886), Expect = 1e-92
 Identities = 181/311 (58%), Positives = 223/311 (71%), Gaps = 1/311 (0%)
 Frame = +3

Query: 6    GGYSYFVFKQLYNSKQFSKLLKLGEEFPEELLSFLKLHQDLLWLHEVFLNQFSSASETLH 185
            GG+SYFVFKQLY  +QFSKLL++GEEFPEEL  FLK H +LLWLHEVFL+QF SASETLH
Sbjct: 1082 GGFSYFVFKQLYQKRQFSKLLRVGEEFPEELSFFLKHHHELLWLHEVFLHQFPSASETLH 1141

Query: 186  LLALSQGDRLISETE-GPESYDPVVEXXXXXXXXXXXXSKIAAVAGKTADYDTKLKRIEA 362
             LALSQ +  I ETE G E     +             SKI+ +AGK AD++TK+KRI+A
Sbjct: 1142 ALALSQDEYSILETEEGAEPESTGMIKSSADRKRLLNLSKISVMAGKNADFETKVKRIDA 1201

Query: 363  DXXXXXXXXXXXXXXPDDDEEKQTIGQRLLPPHELIELCLTSQNRDLSLFAFDVFAWTSS 542
            D                +  E    GQ+L  P ELIE CL  ++ +L+L AFDVFAWTSS
Sbjct: 1202 DLKILKLQEEILKVLQANGVEVSD-GQQLFRPEELIEHCLKVESPELALQAFDVFAWTSS 1260

Query: 543  YFLKCNASLLEECWRNAANQDDWEHIYQTSMAKGWGEEETLGVLRDAVLFQASSRCYGPK 722
             F + + SLLEECW+NAA+QDDW  ++Q S+ +GW +EETL  LRD VLFQ SSRCYGP+
Sbjct: 1261 SFRRSHRSLLEECWKNAADQDDWGKLHQASIDEGWSDEETLQQLRDTVLFQVSSRCYGPR 1320

Query: 723  TATFEGGFDEVLPLRQENADLPSLKEMGSSVEAILMQHKNFPDAGKLMLTAIMLGNVQDD 902
              T E GFD+VLPLR+EN+++ +LK +  SVEA+LMQHK+FPDAGKLMLTAIMLG+V DD
Sbjct: 1321 AETIEEGFDKVLPLRKENSEVSALKGLDFSVEAVLMQHKDFPDAGKLMLTAIMLGSVHDD 1380

Query: 903  STMEEGPSPME 935
            + +EEG SPME
Sbjct: 1381 TKVEEGTSPME 1391


>ref|XP_002301581.1| predicted protein [Populus trichocarpa] gi|222843307|gb|EEE80854.1|
            predicted protein [Populus trichocarpa]
          Length = 621

 Score =  338 bits (868), Expect = 1e-90
 Identities = 182/314 (57%), Positives = 220/314 (70%), Gaps = 3/314 (0%)
 Frame = +3

Query: 3    KGGYSYFVFKQLYNSKQFSKLLKLGEEFPEELLSFLKLHQDLLWLHEVFLNQFSSASETL 182
            KGG+SYFVFKQLY  +Q SKLL+LGEEF EEL  FLK H++LLWLHE+FL+QFSSASETL
Sbjct: 311  KGGFSYFVFKQLYEKRQISKLLRLGEEFQEELSIFLKHHRNLLWLHELFLHQFSSASETL 370

Query: 183  HLLALSQGDRLISETEGPESYDPVVEXXXXXXXXXXXX---SKIAAVAGKTADYDTKLKR 353
            H+LALSQ +  ISE E  E+ D V                 SKIA +AGKT D +TK+KR
Sbjct: 371  HVLALSQDETSISEAE--ETTDHVQNRFITTLADRKRLLNLSKIAIMAGKTTDSETKMKR 428

Query: 354  IEADXXXXXXXXXXXXXXPDDDEEKQTIGQRLLPPHELIELCLTSQNRDLSLFAFDVFAW 533
            IEAD              P + E  Q  GQRL  P ELIELC   QN +L+L  FDVFAW
Sbjct: 429  IEADLKILKLQEEILKVLPAN-EANQYDGQRLFRPEELIELCFKVQNPELALRGFDVFAW 487

Query: 534  TSSYFLKCNASLLEECWRNAANQDDWEHIYQTSMAKGWGEEETLGVLRDAVLFQASSRCY 713
            TSS F + + +LLEECW+NAA+QDDW  ++Q S  +GW +EE L  LRD VLFQASS CY
Sbjct: 488  TSSSFRRSHRNLLEECWKNAADQDDWGQLHQASKDEGWSDEEILQQLRDTVLFQASSSCY 547

Query: 714  GPKTATFEGGFDEVLPLRQENADLPSLKEMGSSVEAILMQHKNFPDAGKLMLTAIMLGNV 893
            GP     + GFD VLPLR+EN+ + +L+++  SVEAILMQHK++PDAGKLMLTAIMLG+V
Sbjct: 548  GPNAEIIDEGFDAVLPLRKENSGVSALEDLDFSVEAILMQHKDYPDAGKLMLTAIMLGSV 607

Query: 894  QDDSTMEEGPSPME 935
             D+S +EE PS ME
Sbjct: 608  HDNSKVEENPSSME 621


>emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CAI64811.1| nucleoporin
            [Lotus japonicus]
          Length = 1309

 Score =  312 bits (799), Expect = 1e-82
 Identities = 167/312 (53%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
 Frame = +3

Query: 6    GGYSYFVFKQLYNSKQFSKLLKLGEEFPEELLSFLKLHQDLLWLHEVFLNQFSSASETLH 185
            GG+SY+VF++L+ ++QFS+LLKLGEEFPEEL  FLK H +LLWLH++FL+QFSSASETLH
Sbjct: 1000 GGFSYYVFEKLHENRQFSELLKLGEEFPEELSIFLKEHPNLLWLHDLFLHQFSSASETLH 1059

Query: 186  LLALSQGDRLISETEGPESYDPVVEXXXXXXXXXXXXSKIAA-VAGKTADYDTKLKRIEA 362
             LAL+Q  +  +  E  ++Y    +            SKIAA  AG+ A    K+ RIEA
Sbjct: 1060 ALALTQNIQSTTAAEEEQAYMKS-KLKLSDRKNLLYLSKIAAFAAGRDAGTQVKVDRIEA 1118

Query: 363  DXXXXXXXXXXXXXXPDDDEEKQTIGQRLLPPHELIELCLTSQNRDLSLFAFDVFAWTSS 542
            D              P   E+KQ I  +LL P +LI+LCL  ++ +LSL+ FDVFAWTSS
Sbjct: 1119 DLKILKLQEEVMKRLPSV-EDKQLIEDQLLHPEDLIKLCLEGEDGELSLWTFDVFAWTSS 1177

Query: 543  YFLKCNASLLEECWRNAANQDDWEHIYQTSMAKGWGEEETLGVLRDAVLFQASSRCYGPK 722
             F K +  LLE+CW+ A++QDDW   + + M +GW +EETL  L++ VLFQASSRCYGP+
Sbjct: 1178 SFRKTHRKLLEDCWKKASSQDDWSKFHDSCMVEGWSDEETLQNLKNTVLFQASSRCYGPR 1237

Query: 723  TATFEGGFDEVLPLRQENADLPSLKEMGSSVEAILMQHKNFPDAGKLMLTAIMLGNVQD- 899
            + +FE GFD+VLPLRQEN +   L +M SSVE ILMQHK+FP AGKLML A+MLG+  D 
Sbjct: 1238 SESFEEGFDQVLPLRQENMETSMLGDMSSSVETILMQHKDFPVAGKLMLMAVMLGSDHDG 1297

Query: 900  DSTMEEGPSPME 935
            D  +EEGPSPME
Sbjct: 1298 DIGVEEGPSPME 1309


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