BLASTX nr result

ID: Panax21_contig00026634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026634
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18342.3| unnamed protein product [Vitis vinifera]              204   8e-51
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   202   2e-50
ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   202   3e-50
ref|NP_198579.2| condensin complex subunit 3 [Arabidopsis thalia...   179   2e-43
dbj|BAB08309.1| unnamed protein product [Arabidopsis thaliana]        179   2e-43

>emb|CBI18342.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  204 bits (518), Expect = 8e-51
 Identities = 109/172 (63%), Positives = 124/172 (72%), Gaps = 1/172 (0%)
 Frame = +3

Query: 3   WMLGKSIEPVEXXXXXXXPGAKHIHLDIQRAAIRCLGLFGLLERKPSEELMKQLMLSFAK 182
           WM GKSIEP E       PGAKH+HLD+Q  A RCLGLFGLLERKPS EL+KQL   F K
Sbjct: 146 WMQGKSIEPDELLQSLLLPGAKHVHLDVQGVATRCLGLFGLLERKPSVELVKQLRFCFIK 205

Query: 183 GPSLISAMAGKALIDLLTWHGPQEVDKAISQDLLLELHET-MSFDPVNLSGTNGDLDIKL 359
           GPS IS +A KALID   WHGPQEVD+A+  +L   LHE  M+F PVNL   N D +++L
Sbjct: 206 GPSSISIVACKALIDFGMWHGPQEVDRAMGLELSSLLHENKMTFSPVNLCDMNEDWNVEL 265

Query: 360 LGLLSIGLERFNRCKSVEADECESVQAVLGEGFAKILLLSEKYPTIPASSHP 515
           L LL  GL   +  KSV+ DE ESVQA+LGEGFAKILLLSE YP+IPAS HP
Sbjct: 266 LDLLYAGLNVNDWIKSVDMDENESVQAILGEGFAKILLLSENYPSIPASLHP 317


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  202 bits (514), Expect = 2e-50
 Identities = 109/173 (63%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
 Frame = +3

Query: 3    WMLGKSIEPVEXXXXXXXPGAKHIHLDIQRAAIRCLGLFGLLERKPSEELMKQLMLSFAK 182
            WM GKSIEP E       PGAKH+HL +QR A RCLGLFGLLERKPS EL+KQL   F K
Sbjct: 534  WMQGKSIEPDELLQSLLLPGAKHVHLXVQRVATRCLGLFGLLERKPSVELVKQLRFCFIK 593

Query: 183  GPSLISAMAGKALIDLLTWHGPQEVDKAISQDLLLELHET-MSFDPVNLSGTNGDLDIKL 359
            G S IS +A KALID+  WHGPQEVD+A+  +L   LHE  M+F PVNL   N D +++L
Sbjct: 594  GXSSISIVACKALIDIGMWHGPQEVDRAMGLELSSLLHENKMTFSPVNLCDMNEDWNVEL 653

Query: 360  LGLLSIGLERFNRCKSVEADECESVQAVLGEGFAKILLLSEKYPTIPASSHPL 518
            L LL  GL   +  KSV+ DE ESVQA+LGEGFAKILLLSE YP IPAS HPL
Sbjct: 654  LDLLYAGLNVNDWIKSVDMDENESVQAILGEGFAKILLLSENYPCIPASLHPL 706


>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
            gi|297745068|emb|CBI38660.3| unnamed protein product
            [Vitis vinifera]
          Length = 1036

 Score =  202 bits (513), Expect = 3e-50
 Identities = 109/173 (63%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
 Frame = +3

Query: 3    WMLGKSIEPVEXXXXXXXPGAKHIHLDIQRAAIRCLGLFGLLERKPSEELMKQLMLSFAK 182
            WM GKSIEP E       PGAKH+HL +QR A RCLGLFGLLERKPS EL+KQL   F K
Sbjct: 534  WMQGKSIEPDELLQSLLLPGAKHVHLAVQRVATRCLGLFGLLERKPSVELVKQLRFCFIK 593

Query: 183  GPSLISAMAGKALIDLLTWHGPQEVDKAISQDLLLELHET-MSFDPVNLSGTNGDLDIKL 359
            G S IS +A KALID+  WHGPQEVD+A+  +L   LHE  M+F PVNL   N D +++L
Sbjct: 594  GSSSISIVACKALIDIGMWHGPQEVDRAMGLELSSLLHENKMTFSPVNLCDMNEDWNVEL 653

Query: 360  LGLLSIGLERFNRCKSVEADECESVQAVLGEGFAKILLLSEKYPTIPASSHPL 518
            L LL  GL   +  KSV+ DE ESVQA+LGEGFAKILLLSE YP IPAS HPL
Sbjct: 654  LDLLYAGLNVNDWIKSVDMDENESVQAILGEGFAKILLLSENYPCIPASLHPL 706


>ref|NP_198579.2| condensin complex subunit 3 [Arabidopsis thaliana]
            gi|332006829|gb|AED94212.1| condensin complex subunit 3
            [Arabidopsis thaliana]
          Length = 1051

 Score =  179 bits (454), Expect = 2e-43
 Identities = 93/171 (54%), Positives = 120/171 (70%), Gaps = 1/171 (0%)
 Frame = +3

Query: 12   GKSIEPVEXXXXXXXPGAKHIHLDIQRAAIRCLGLFGLLERKPSEELMKQLMLSFAKGPS 191
            GK+IEP E       PGAKH HLD+QR AI+ LGLFGLLE+KPSEEL++QL  +F + P 
Sbjct: 562  GKAIEPEEILHALLLPGAKHTHLDVQRIAIKGLGLFGLLEKKPSEELVRQLRAAFCRSPP 621

Query: 192  LISAMAGKALIDLLTWHGPQEVDKAISQDLLLELH-ETMSFDPVNLSGTNGDLDIKLLGL 368
             IS MA KAL+DL  WH P EVDKA+ QDLL +   +++ F P++LS    D++ K+L L
Sbjct: 622  PISIMACKALVDLGMWHSPTEVDKAMGQDLLSQFEDDSIDFAPIDLSNAEEDMNFKMLDL 681

Query: 369  LSIGLERFNRCKSVEADECESVQAVLGEGFAKILLLSEKYPTIPASSHPLL 521
            L  GLE  +   S E+ E ESV+A +GEGFAK+LLL EKYP +PAS +P +
Sbjct: 682  LYAGLESDDWRASTESSENESVKATVGEGFAKLLLLGEKYPNLPASFYPFV 732


>dbj|BAB08309.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1076

 Score =  179 bits (454), Expect = 2e-43
 Identities = 93/171 (54%), Positives = 120/171 (70%), Gaps = 1/171 (0%)
 Frame = +3

Query: 12   GKSIEPVEXXXXXXXPGAKHIHLDIQRAAIRCLGLFGLLERKPSEELMKQLMLSFAKGPS 191
            GK+IEP E       PGAKH HLD+QR AI+ LGLFGLLE+KPSEEL++QL  +F + P 
Sbjct: 587  GKAIEPEEILHALLLPGAKHTHLDVQRIAIKGLGLFGLLEKKPSEELVRQLRAAFCRSPP 646

Query: 192  LISAMAGKALIDLLTWHGPQEVDKAISQDLLLELH-ETMSFDPVNLSGTNGDLDIKLLGL 368
             IS MA KAL+DL  WH P EVDKA+ QDLL +   +++ F P++LS    D++ K+L L
Sbjct: 647  PISIMACKALVDLGMWHSPTEVDKAMGQDLLSQFEDDSIDFAPIDLSNAEEDMNFKMLDL 706

Query: 369  LSIGLERFNRCKSVEADECESVQAVLGEGFAKILLLSEKYPTIPASSHPLL 521
            L  GLE  +   S E+ E ESV+A +GEGFAK+LLL EKYP +PAS +P +
Sbjct: 707  LYAGLESDDWRASTESSENESVKATVGEGFAKLLLLGEKYPNLPASFYPFV 757


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