BLASTX nr result

ID: Panax21_contig00026622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026622
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164583.1| PREDICTED: LOW QUALITY PROTEIN: activating s...    95   7e-18
ref|XP_004141286.1| PREDICTED: activating signal cointegrator 1 ...    95   7e-18
ref|XP_002510105.1| protein with unknown function [Ricinus commu...    81   1e-13
ref|XP_002890748.1| predicted protein [Arabidopsis lyrata subsp....    80   1e-13
gb|AAF24949.1|AC012375_12 T22C5.20 [Arabidopsis thaliana]              79   4e-13

>ref|XP_004164583.1| PREDICTED: LOW QUALITY PROTEIN: activating signal cointegrator 1
           complex subunit 2-like [Cucumis sativus]
          Length = 867

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/79 (59%), Positives = 55/79 (69%)
 Frame = +2

Query: 278 TRVQMRQNGDWVPSQIQSGNFVNFLPQXXXXXXXXXXXXXXXXPVESQRVVDLLNRELSQ 457
           +R+QM  NGDWV S+   G+FVN+LPQ                PVESQRVVDLLNRELS+
Sbjct: 60  SRIQMGANGDWVSSRASGGSFVNYLPQDEAVATGLRAEEGALDPVESQRVVDLLNRELSR 119

Query: 458 LLKLNPRDFWREVASDTSL 514
           LLKLN ++FWREVA DTSL
Sbjct: 120 LLKLNAKEFWREVAMDTSL 138


>ref|XP_004141286.1| PREDICTED: activating signal cointegrator 1 complex subunit 2-like
           [Cucumis sativus]
          Length = 867

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/79 (59%), Positives = 55/79 (69%)
 Frame = +2

Query: 278 TRVQMRQNGDWVPSQIQSGNFVNFLPQXXXXXXXXXXXXXXXXPVESQRVVDLLNRELSQ 457
           +R+QM  NGDWV S+   G+FVN+LPQ                PVESQRVVDLLNRELS+
Sbjct: 60  SRIQMGANGDWVSSRASGGSFVNYLPQDEAVATGLRAEEGALDPVESQRVVDLLNRELSR 119

Query: 458 LLKLNPRDFWREVASDTSL 514
           LLKLN ++FWREVA DTSL
Sbjct: 120 LLKLNAKEFWREVAMDTSL 138


>ref|XP_002510105.1| protein with unknown function [Ricinus communis]
            gi|223550806|gb|EEF52292.1| protein with unknown function
            [Ricinus communis]
          Length = 2020

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = +2

Query: 299  NGDWVPSQ---IQSGNFVNFLPQXXXXXXXXXXXXXXXXPVESQRVVDLLNRELSQLLKL 469
            +G W+ ++      GNFVN+LPQ                PVESQRVVDLL+RELS+LLKL
Sbjct: 1208 SGVWISNKEGGAPPGNFVNYLPQDEAVAAGLGAEEGGLDPVESQRVVDLLSRELSRLLKL 1267

Query: 470  NPRDFWREVASDTSL 514
            NPRDFWREVASD SL
Sbjct: 1268 NPRDFWREVASDKSL 1282


>ref|XP_002890748.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297336590|gb|EFH67007.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1838

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
 Frame = +2

Query: 278  TRVQMRQNGDWVPSQIQS---GNFVNFLPQXXXXXXXXXXXXXXXXPVESQRVVDLLNRE 448
            +RV+M   G  V S+  +   G+FVN+LPQ                PVESQ VVDLLNRE
Sbjct: 1100 SRVRMGDQGQLVSSKSPAQGGGSFVNYLPQDEAVAAGLGPDDGGLDPVESQGVVDLLNRE 1159

Query: 449  LSQLLKLNPRDFWREVASDTSL 514
            L++LLKLNPRDFWREVASD SL
Sbjct: 1160 LTRLLKLNPRDFWREVASDASL 1181


>gb|AAF24949.1|AC012375_12 T22C5.20 [Arabidopsis thaliana]
          Length = 1840

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/82 (53%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
 Frame = +2

Query: 278  TRVQMRQNGDWVPSQIQS---GNFVNFLPQXXXXXXXXXXXXXXXXPVESQRVVDLLNRE 448
            +RV++   G  V S+  +   G+FVN+LPQ                PVESQ VVDLLNRE
Sbjct: 1099 SRVRIGDQGQLVSSKSPAQGGGSFVNYLPQDEAVAAGLGPDDGGLDPVESQGVVDLLNRE 1158

Query: 449  LSQLLKLNPRDFWREVASDTSL 514
            L++LLKLNPRDFWREVASD SL
Sbjct: 1159 LTRLLKLNPRDFWREVASDASL 1180


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