BLASTX nr result
ID: Panax21_contig00026619
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00026619
(666 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR... 275 6e-72
emb|CBI35579.3| unnamed protein product [Vitis vinifera] 275 6e-72
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi... 261 7e-68
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2... 238 6e-61
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2... 238 6e-61
>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
Length = 515
Score = 275 bits (703), Expect = 6e-72
Identities = 137/217 (63%), Positives = 168/217 (77%)
Frame = +1
Query: 1 DFTFIHSKFLAPLPPLMDEFRISLRLVFPHVIDINHLMDEISPLKKVTNVPAANSYLKRH 180
+F FIHSKFL+PLPP MDEF SLR+VFPHV+D+NHLM EI PLKKVTN+ AA S LKR
Sbjct: 226 EFAFIHSKFLSPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSAAASCLKRR 285
Query: 181 FFSPVDIMEIPHQAETDEGKIHGHNVVRISHLFAKMCSILKITPETLEADSCHLSSALEG 360
FF P+D MEIPHQA ++E KIHGHNV++ISHL A +CSILKITPE +++D HL+SALEG
Sbjct: 286 FFVPID-MEIPHQA-SNEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGHLASALEG 343
Query: 361 YANNLTPNSSSSEDTIQDDVRVWTNNSRKVSTENLVFLWGFAGGMSARTLKSQLCTCHEV 540
YAN P+S+++ED I ++VWT+++RKVS+E LVF+WGF G MSA LK L H V
Sbjct: 344 YANIFHPHSTNTEDPIDGGIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKRLLQGSHSV 403
Query: 541 FCEDFDAWLVDKSCAIIVFWNPGSSVNFLEAMESGGI 651
F E+FD +VD SCAI+VFW G S FLEA+ S I
Sbjct: 404 FSEEFDVRMVDGSCAIVVFWQSGLSQTFLEAISSNWI 440
>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
Length = 6458
Score = 275 bits (703), Expect = 6e-72
Identities = 137/217 (63%), Positives = 168/217 (77%)
Frame = +1
Query: 1 DFTFIHSKFLAPLPPLMDEFRISLRLVFPHVIDINHLMDEISPLKKVTNVPAANSYLKRH 180
+F FIHSKFL+PLPP MDEF SLR+VFPHV+D+NHLM EI PLKKVTN+ AA S LKR
Sbjct: 6169 EFAFIHSKFLSPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSAAASCLKRR 6228
Query: 181 FFSPVDIMEIPHQAETDEGKIHGHNVVRISHLFAKMCSILKITPETLEADSCHLSSALEG 360
FF P+D MEIPHQA ++E KIHGHNV++ISHL A +CSILKITPE +++D HL+SALEG
Sbjct: 6229 FFVPID-MEIPHQA-SNEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGHLASALEG 6286
Query: 361 YANNLTPNSSSSEDTIQDDVRVWTNNSRKVSTENLVFLWGFAGGMSARTLKSQLCTCHEV 540
YAN P+S+++ED I ++VWT+++RKVS+E LVF+WGF G MSA LK L H V
Sbjct: 6287 YANIFHPHSTNTEDPIDGGIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKRLLQGSHSV 6346
Query: 541 FCEDFDAWLVDKSCAIIVFWNPGSSVNFLEAMESGGI 651
F E+FD +VD SCAI+VFW G S FLEA+ S I
Sbjct: 6347 FSEEFDVRMVDGSCAIVVFWQSGLSQTFLEAISSNWI 6383
>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
gi|223533357|gb|EEF35108.1| ribonuclease, putative
[Ricinus communis]
Length = 624
Score = 261 bits (668), Expect = 7e-68
Identities = 128/213 (60%), Positives = 158/213 (74%)
Frame = +1
Query: 1 DFTFIHSKFLAPLPPLMDEFRISLRLVFPHVIDINHLMDEISPLKKVTNVPAANSYLKRH 180
D FIHSKFLAPLPP M+EF SLRLVFP VID+NHLM EISPLKKVTN+P A SYLK
Sbjct: 336 DLAFIHSKFLAPLPPSMEEFTCSLRLVFPQVIDVNHLMKEISPLKKVTNIPMATSYLKNW 395
Query: 181 FFSPVDIMEIPHQAETDEGKIHGHNVVRISHLFAKMCSILKITPETLEADSCHLSSALEG 360
FF+PVD MEIP A +EGKIHGHNV+RI LFAK+C ILK+ P +++++ +L+SA+E
Sbjct: 396 FFAPVD-MEIPFPAMVNEGKIHGHNVMRICQLFAKLCYILKLAPNSIQSNEKNLASAIEA 454
Query: 361 YANNLTPNSSSSEDTIQDDVRVWTNNSRKVSTENLVFLWGFAGGMSARTLKSQLCTCHEV 540
Y N +P ++ +DVR+WTNN+RKVS ++LVFLWGF MSA LKS L H+V
Sbjct: 455 YVNIFSPYFPGPQEPTDEDVRIWTNNTRKVSCQDLVFLWGFRYRMSAGMLKSLLQQSHKV 514
Query: 541 FCEDFDAWLVDKSCAIIVFWNPGSSVNFLEAME 639
F E+FD VDKSCAI+VFW PG S L+ ++
Sbjct: 515 FSEEFDVRFVDKSCAIVVFWEPGLSNTLLDVLK 547
>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
predicted protein [Populus trichocarpa]
Length = 628
Score = 238 bits (608), Expect = 6e-61
Identities = 118/212 (55%), Positives = 152/212 (71%)
Frame = +1
Query: 1 DFTFIHSKFLAPLPPLMDEFRISLRLVFPHVIDINHLMDEISPLKKVTNVPAANSYLKRH 180
D T IHSKF+APLPP +DEF SLRL FP VID+NHLM EISPL+KVT++P A S LK
Sbjct: 342 DLTVIHSKFIAPLPPTVDEFMCSLRLAFPLVIDVNHLMKEISPLRKVTSIPVAISQLKNR 401
Query: 181 FFSPVDIMEIPHQAETDEGKIHGHNVVRISHLFAKMCSILKITPETLEADSCHLSSALEG 360
FF+P+D MEIP QA +E IHG NVV+I LFA++CSILKI P +++D +SALE
Sbjct: 402 FFTPID-MEIPCQAMENEDTIHGQNVVKICELFARLCSILKIDPAAVKSDEEKGASALEA 460
Query: 361 YANNLTPNSSSSEDTIQDDVRVWTNNSRKVSTENLVFLWGFAGGMSARTLKSQLCTCHEV 540
YAN +P ++SE+ I ++++WTNN+R VS E++VFLWGF ++A LKS L HE
Sbjct: 461 YANIFSPFCTASEEPIDGEIKIWTNNTRTVSCEDMVFLWGFGDRVTAGILKSLLQESHEA 520
Query: 541 FCEDFDAWLVDKSCAIIVFWNPGSSVNFLEAM 636
F ++FD LVD SCAI++FW G + FL M
Sbjct: 521 FSKEFDVRLVDNSCAIVIFWQHGLTETFLNTM 552
>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
predicted protein [Populus trichocarpa]
Length = 626
Score = 238 bits (608), Expect = 6e-61
Identities = 118/212 (55%), Positives = 152/212 (71%)
Frame = +1
Query: 1 DFTFIHSKFLAPLPPLMDEFRISLRLVFPHVIDINHLMDEISPLKKVTNVPAANSYLKRH 180
D T IHSKF+APLPP +DEF SLRL FP VID+NHLM EISPL+KVT++P A S LK
Sbjct: 340 DLTVIHSKFIAPLPPTVDEFMCSLRLAFPLVIDVNHLMKEISPLRKVTSIPVAISQLKNR 399
Query: 181 FFSPVDIMEIPHQAETDEGKIHGHNVVRISHLFAKMCSILKITPETLEADSCHLSSALEG 360
FF+P+D MEIP QA +E IHG NVV+I LFA++CSILKI P +++D +SALE
Sbjct: 400 FFTPID-MEIPCQAMENEDTIHGQNVVKICELFARLCSILKIDPAAVKSDEEKGASALEA 458
Query: 361 YANNLTPNSSSSEDTIQDDVRVWTNNSRKVSTENLVFLWGFAGGMSARTLKSQLCTCHEV 540
YAN +P ++SE+ I ++++WTNN+R VS E++VFLWGF ++A LKS L HE
Sbjct: 459 YANIFSPFCTASEEPIDGEIKIWTNNTRTVSCEDMVFLWGFGDRVTAGILKSLLQESHEA 518
Query: 541 FCEDFDAWLVDKSCAIIVFWNPGSSVNFLEAM 636
F ++FD LVD SCAI++FW G + FL M
Sbjct: 519 FSKEFDVRLVDNSCAIVIFWQHGLTETFLNTM 550