BLASTX nr result

ID: Panax21_contig00026616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026616
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307485.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002526135.1| hypothetical protein RCOM_0137170 [Ricinus c...    85   7e-15
ref|XP_003536437.1| PREDICTED: uncharacterized protein LOC100817...    72   6e-11
gb|AAF63102.1|AC006423_3 Hypothetical protein [Arabidopsis thali...    70   2e-10
ref|NP_175045.2| RING/FYVE/PHD zinc finger-containing protein [A...    70   2e-10

>ref|XP_002307485.1| predicted protein [Populus trichocarpa] gi|222856934|gb|EEE94481.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score = 88.2 bits (217), Expect = 8e-16
 Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = +3

Query: 219 VTICQQCGDKGWDNAFVYCIECLEFAVHRYCLNLIPNTFDEFVPWVCEDCEKEMPNQPPL 398
           VTICQ+CGD+G+D A ++C EC  +AVH YCL+++P TFDE+V W+C  CE +      L
Sbjct: 7   VTICQKCGDRGFDAALIFCDECQAYAVHCYCLDVLPATFDEYVVWLCYHCESKAVKLSSL 66

Query: 399 EKPTA-ISTNGSSQEISKAHIKHK 467
           ++P + IST   S  +    +K K
Sbjct: 67  DRPNSPISTESDSDSLKIIQLKKK 90


>ref|XP_002526135.1| hypothetical protein RCOM_0137170 [Ricinus communis]
           gi|223534512|gb|EEF36211.1| hypothetical protein
           RCOM_0137170 [Ricinus communis]
          Length = 366

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
 Frame = +3

Query: 216 MVTICQQCGDKGWDNAFVYCIECLEFAVHRYCLNLIPNTFDEFVPWVCEDCE--KEMPNQ 389
           MVTICQ CGD G+ NA ++C EC  +AVH YCL ++P TFDE+V W+CEDCE  K +  +
Sbjct: 1   MVTICQTCGDGGFSNALIFCDECQVYAVHCYCLAILPATFDEYVLWLCEDCESIKNLKQK 60

Query: 390 PPLEKPTAIS-TNGSSQEISKAHIKHKREDAELASCSKKKKCEAR 521
               K  + S TN     + K+      +   L +  K ++ E+R
Sbjct: 61  SKKRKVNSCSLTNSKVAGLEKSSSVQLHDADCLKTIDKNQEFESR 105


>ref|XP_003536437.1| PREDICTED: uncharacterized protein LOC100817132 [Glycine max]
          Length = 338

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 35/106 (33%), Positives = 55/106 (51%)
 Frame = +3

Query: 216 MVTICQQCGDKGWDNAFVYCIECLEFAVHRYCLNLIPNTFDEFVPWVCEDCEKEMPNQPP 395
           M T+C  CGD+G+    V+C EC+ +A+HRYCL  + N F + V W CEDC  ++   P 
Sbjct: 1   METVCLHCGDRGFPETLVFCTECMAYALHRYCLKGLVN-FTDAVTWFCEDCATKLGVPPA 59

Query: 396 LEKPTAISTNGSSQEISKAHIKHKREDAELASCSKKKKCEARCVGK 533
           L++ T I++      I      +K+   ++     + K  A  V K
Sbjct: 60  LDQSTPIASVTRENCIQGVKKHNKQRKKKITKKQIEGKANAGLVAK 105


>gb|AAF63102.1|AC006423_3 Hypothetical protein [Arabidopsis thaliana]
          Length = 419

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/106 (31%), Positives = 52/106 (49%)
 Frame = +3

Query: 225 ICQQCGDKGWDNAFVYCIECLEFAVHRYCLNLIPNTFDEFVPWVCEDCEKEMPNQPPLEK 404
           +CQ CGD G++ A V+C  C+  ++HRYCL + P  F E++ W+CEDC+    +    E 
Sbjct: 9   VCQTCGDIGFEEALVFCDSCMFESIHRYCLGITPIPFTEYITWICEDCDNSESDSDCNEV 68

Query: 405 PTAISTNGSSQEISKAHIKHKREDAELASCSKKKKCEARCVGKRHE 542
              +     S+      +       E    SK++  E+ C  K HE
Sbjct: 69  DQTVKKKKKSRNQPLVVLAEDNVLQEPLEGSKRE--ESSCSRKPHE 112


>ref|NP_175045.2| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|332193873|gb|AEE31994.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
          Length = 371

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/106 (31%), Positives = 52/106 (49%)
 Frame = +3

Query: 225 ICQQCGDKGWDNAFVYCIECLEFAVHRYCLNLIPNTFDEFVPWVCEDCEKEMPNQPPLEK 404
           +CQ CGD G++ A V+C  C+  ++HRYCL + P  F E++ W+CEDC+    +    E 
Sbjct: 9   VCQTCGDIGFEEALVFCDSCMFESIHRYCLGITPIPFTEYITWICEDCDNSESDSDCNEV 68

Query: 405 PTAISTNGSSQEISKAHIKHKREDAELASCSKKKKCEARCVGKRHE 542
              +     S+      +       E    SK++  E+ C  K HE
Sbjct: 69  DQTVKKKKKSRNQPLVVLAEDNVLQEPLEGSKRE--ESSCSRKPHE 112


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