BLASTX nr result

ID: Panax21_contig00026606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026606
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15906.3| unnamed protein product [Vitis vinifera]              122   6e-26
ref|XP_002278308.1| PREDICTED: rab3 GTPase-activating protein ca...   122   6e-26
emb|CAN60454.1| hypothetical protein VITISV_019552 [Vitis vinifera]   122   6e-26
ref|XP_002526620.1| conserved hypothetical protein [Ricinus comm...   121   8e-26
ref|XP_002866272.1| hypothetical protein ARALYDRAFT_495970 [Arab...   118   9e-25

>emb|CBI15906.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score =  122 bits (305), Expect = 6e-26
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -2

Query: 235 TLASSWERFISEIEAVCRQWLADGPKNLLEKNAVCLKISKNLYKVQSELKYLMKSYCMEY 56
           TLASSWERFISEIEAVCR WLADGPKNLLEK AV L  S++LYKV+ ELKYLMKSY MEY
Sbjct: 25  TLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDLYKVKFELKYLMKSYFMEY 84

Query: 55  YFESSNNGSVGHWNFNLH 2
           YFE+++ G V  W F++H
Sbjct: 85  YFETTSAGKVTDWKFSMH 102


>ref|XP_002278308.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit-like
           [Vitis vinifera]
          Length = 891

 Score =  122 bits (305), Expect = 6e-26
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -2

Query: 235 TLASSWERFISEIEAVCRQWLADGPKNLLEKNAVCLKISKNLYKVQSELKYLMKSYCMEY 56
           TLASSWERFISEIEAVCR WLADGPKNLLEK AV L  S++LYKV+ ELKYLMKSY MEY
Sbjct: 25  TLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDLYKVKFELKYLMKSYFMEY 84

Query: 55  YFESSNNGSVGHWNFNLH 2
           YFE+++ G V  W F++H
Sbjct: 85  YFETTSAGKVTDWKFSMH 102


>emb|CAN60454.1| hypothetical protein VITISV_019552 [Vitis vinifera]
          Length = 494

 Score =  122 bits (305), Expect = 6e-26
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -2

Query: 235 TLASSWERFISEIEAVCRQWLADGPKNLLEKNAVCLKISKNLYKVQSELKYLMKSYCMEY 56
           TLASSWERFISEIEAVCR WLADGPKNLLEK AV L  S++LYKV+ ELKYLMKSY MEY
Sbjct: 25  TLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDLYKVKFELKYLMKSYFMEY 84

Query: 55  YFESSNNGSVGHWNFNLH 2
           YFE+++ G V  W F++H
Sbjct: 85  YFETTSAGKVTDWKFSMH 102


>ref|XP_002526620.1| conserved hypothetical protein [Ricinus communis]
           gi|223534060|gb|EEF35779.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 946

 Score =  121 bits (304), Expect = 8e-26
 Identities = 56/78 (71%), Positives = 66/78 (84%)
 Frame = -2

Query: 235 TLASSWERFISEIEAVCRQWLADGPKNLLEKNAVCLKISKNLYKVQSELKYLMKSYCMEY 56
           TLASSWERFISEIEAVCR+WLADGPKNLLEK AV L+ S+ LYKV+ EL+Y MKSY MEY
Sbjct: 33  TLASSWERFISEIEAVCRKWLADGPKNLLEKGAVQLEFSQKLYKVKFELRYAMKSYSMEY 92

Query: 55  YFESSNNGSVGHWNFNLH 2
           YFE+++ G +  W+ NLH
Sbjct: 93  YFETNSGGKIADWDGNLH 110


>ref|XP_002866272.1| hypothetical protein ARALYDRAFT_495970 [Arabidopsis lyrata subsp.
           lyrata] gi|297312107|gb|EFH42531.1| hypothetical protein
           ARALYDRAFT_495970 [Arabidopsis lyrata subsp. lyrata]
          Length = 963

 Score =  118 bits (295), Expect = 9e-25
 Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 4/82 (4%)
 Frame = -2

Query: 235 TLASSWERFISEIEAVCRQWLADGPKNLLEKNAVCLKISKNLYKVQSELKYLMKSYCMEY 56
           TLASSWERFIS+IEA CRQWLADGPKNL+EK AV ++ SKNL+ V++ELK + KSYCME+
Sbjct: 27  TLASSWERFISDIEATCRQWLADGPKNLVEKGAVAVEDSKNLFTVKNELKNVAKSYCMEF 86

Query: 55  YFESSNNGS----VGHWNFNLH 2
           YF+  NNGS    +G+WN N H
Sbjct: 87  YFQIENNGSQQAGIGNWNSNSH 108


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