BLASTX nr result

ID: Panax21_contig00026588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026588
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314069.1| predicted protein [Populus trichocarpa] gi|2...   301   4e-80
ref|XP_002513489.1| origin recognition complex subunit, putative...   300   6e-80
ref|XP_002282859.2| PREDICTED: origin recognition complex subuni...   293   1e-77
emb|CBI16386.3| unnamed protein product [Vitis vinifera]              293   1e-77
ref|XP_003547149.1| PREDICTED: origin recognition complex subuni...   291   3e-77

>ref|XP_002314069.1| predicted protein [Populus trichocarpa] gi|222850477|gb|EEE88024.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score =  301 bits (771), Expect = 4e-80
 Identities = 144/161 (89%), Positives = 155/161 (96%), Gaps = 2/161 (1%)
 Frame = -3

Query: 479 QCLGRCLYIHGVPGTGKTMSVLAVMRNLKAEVDAGTINPYCFVEINGLKLASPENIYRVI 300
           QCLGRCLY+HGVPGTGKTMSVLAVMRNLK+EVDAG+I PYCFV++NGLKLASPENIYR I
Sbjct: 456 QCLGRCLYVHGVPGTGKTMSVLAVMRNLKSEVDAGSIRPYCFVDVNGLKLASPENIYRAI 515

Query: 299 YEALSGHRVNWKKALHFLNERFSNGTKSG--DNRPCILLIDELDLLVTRNQSVLYNILDW 126
           YEAL+GHRV+WKKALH LNERFS+G ++G  D+RPCILLIDELDLLVTRNQSVLYNILDW
Sbjct: 516 YEALTGHRVSWKKALHLLNERFSDGKRTGKEDDRPCILLIDELDLLVTRNQSVLYNILDW 575

Query: 125 PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 3
           PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY
Sbjct: 576 PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 616


>ref|XP_002513489.1| origin recognition complex subunit, putative [Ricinus communis]
           gi|223547397|gb|EEF48892.1| origin recognition complex
           subunit, putative [Ricinus communis]
          Length = 844

 Score =  300 bits (769), Expect = 6e-80
 Identities = 146/161 (90%), Positives = 153/161 (95%), Gaps = 2/161 (1%)
 Frame = -3

Query: 479 QCLGRCLYIHGVPGTGKTMSVLAVMRNLKAEVDAGTINPYCFVEINGLKLASPENIYRVI 300
           QCLGRCLYIHGVPGTGKTMSVLAVMRNL++EVDAG I PYCFVE+NGLKLASPENIYRVI
Sbjct: 488 QCLGRCLYIHGVPGTGKTMSVLAVMRNLRSEVDAGNIKPYCFVEVNGLKLASPENIYRVI 547

Query: 299 YEALSGHRVNWKKALHFLNERFSNGTK--SGDNRPCILLIDELDLLVTRNQSVLYNILDW 126
           YEAL+GHRV WKKAL+ LNERFS+G K   GD+RPCILLIDELDLLVTRNQSVLYNILDW
Sbjct: 548 YEALTGHRVGWKKALNLLNERFSDGKKVRKGDDRPCILLIDELDLLVTRNQSVLYNILDW 607

Query: 125 PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 3
           PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY
Sbjct: 608 PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 648


>ref|XP_002282859.2| PREDICTED: origin recognition complex subunit 1-like [Vitis
           vinifera]
          Length = 806

 Score =  293 bits (750), Expect = 1e-77
 Identities = 143/161 (88%), Positives = 152/161 (94%), Gaps = 2/161 (1%)
 Frame = -3

Query: 479 QCLGRCLYIHGVPGTGKTMSVLAVMRNLKAEVDAGTINPYCFVEINGLKLASPENIYRVI 300
           QCLGRCLYIHGVPGTGKTMSVL+VMRNL++EVDAG+I PYCFV+INGLKLASPENIYRVI
Sbjct: 448 QCLGRCLYIHGVPGTGKTMSVLSVMRNLRSEVDAGSIKPYCFVDINGLKLASPENIYRVI 507

Query: 299 YEALSGHRVNWKKALHFLNERFSNGTK--SGDNRPCILLIDELDLLVTRNQSVLYNILDW 126
           YEALSGHRV WKKALH LNERF++ +K    + RPCILLIDELDLLVTRNQSVLYNILDW
Sbjct: 508 YEALSGHRVGWKKALHLLNERFADESKIAKEEIRPCILLIDELDLLVTRNQSVLYNILDW 567

Query: 125 PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 3
           PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY
Sbjct: 568 PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 608


>emb|CBI16386.3| unnamed protein product [Vitis vinifera]
          Length = 979

 Score =  293 bits (750), Expect = 1e-77
 Identities = 143/161 (88%), Positives = 152/161 (94%), Gaps = 2/161 (1%)
 Frame = -3

Query: 479  QCLGRCLYIHGVPGTGKTMSVLAVMRNLKAEVDAGTINPYCFVEINGLKLASPENIYRVI 300
            QCLGRCLYIHGVPGTGKTMSVL+VMRNL++EVDAG+I PYCFV+INGLKLASPENIYRVI
Sbjct: 621  QCLGRCLYIHGVPGTGKTMSVLSVMRNLRSEVDAGSIKPYCFVDINGLKLASPENIYRVI 680

Query: 299  YEALSGHRVNWKKALHFLNERFSNGTK--SGDNRPCILLIDELDLLVTRNQSVLYNILDW 126
            YEALSGHRV WKKALH LNERF++ +K    + RPCILLIDELDLLVTRNQSVLYNILDW
Sbjct: 681  YEALSGHRVGWKKALHLLNERFADESKIAKEEIRPCILLIDELDLLVTRNQSVLYNILDW 740

Query: 125  PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 3
            PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY
Sbjct: 741  PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 781


>ref|XP_003547149.1| PREDICTED: origin recognition complex subunit 1-like [Glycine max]
          Length = 850

 Score =  291 bits (746), Expect = 3e-77
 Identities = 143/161 (88%), Positives = 151/161 (93%), Gaps = 2/161 (1%)
 Frame = -3

Query: 479 QCLGRCLYIHGVPGTGKTMSVLAVMRNLKAEVDAGTINPYCFVEINGLKLASPENIYRVI 300
           QCLGRCLYIHGVPGTGKTMSVL+VMR+LK+EVDAG I PY FVEINGLKLASPENIY+VI
Sbjct: 491 QCLGRCLYIHGVPGTGKTMSVLSVMRSLKSEVDAGNIKPYTFVEINGLKLASPENIYKVI 550

Query: 299 YEALSGHRVNWKKALHFLNERFSNGTKSGD--NRPCILLIDELDLLVTRNQSVLYNILDW 126
           YEAL+GHRV+WKKALH LNERF  G K+ D  +RPCILLIDELDLLVTRNQSVLYNILDW
Sbjct: 551 YEALNGHRVSWKKALHLLNERFVEGKKTRDEADRPCILLIDELDLLVTRNQSVLYNILDW 610

Query: 125 PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 3
           PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY
Sbjct: 611 PTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPY 651


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