BLASTX nr result
ID: Panax21_contig00026585
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00026585 (709 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310281.1| short internodes 1 [Populus trichocarpa] gi|... 119 6e-25 ref|XP_002533653.1| transcription factor, putative [Ricinus comm... 116 4e-24 ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|... 114 1e-23 ref|XP_004174041.1| PREDICTED: uncharacterized protein LOC101232... 108 8e-22 ref|XP_004173977.1| PREDICTED: uncharacterized protein LOC101224... 108 8e-22 >ref|XP_002310281.1| short internodes 1 [Populus trichocarpa] gi|222853184|gb|EEE90731.1| short internodes 1 [Populus trichocarpa] Length = 229 Score = 119 bits (298), Expect = 6e-25 Identities = 76/178 (42%), Positives = 83/178 (46%), Gaps = 7/178 (3%) Frame = -3 Query: 515 MAGFFSLGGRGAXXXXXXXXXXXXXXXXXXXXXXSWFLYNRNNPHDQHLPPPYRGFELWX 336 MAG FSLG RG+ SWF Y + PY+ FELW Sbjct: 1 MAGLFSLG-RGSSSSNNQEDQQNNNNPPTEIPQESWFWYKSEDI-------PYKSFELWQ 52 Query: 335 XXXXXXXXXXXXXHNNPLQDFYPXXXXXXXXXXXXVNIIPDERSG-------SFLMMTXX 177 NP QD Y I DE S +F+MM Sbjct: 53 QQHQELLHQRH---QNPQQDLYSPAVGLGVGPSRTSINISDESSSRSAAAAEAFMMMRPG 109 Query: 176 XXXXXXXXGIVNCQDCGNQAKKDCSHMRCRTCCKSRGFQCQTHVKSTWVPASKRRERQ 3 I +CQDCGNQAKKDC HMRCRTCCKSRGF+CQTHVKSTWVPASKRRERQ Sbjct: 110 GSGTGGAGSI-SCQDCGNQAKKDCIHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQ 166 >ref|XP_002533653.1| transcription factor, putative [Ricinus communis] gi|223526448|gb|EEF28724.1| transcription factor, putative [Ricinus communis] Length = 350 Score = 116 bits (291), Expect = 4e-24 Identities = 74/177 (41%), Positives = 81/177 (45%), Gaps = 6/177 (3%) Frame = -3 Query: 515 MAGFFSLGG---RGAXXXXXXXXXXXXXXXXXXXXXXSWFLYNRNNPHDQHLPPPYRGFE 345 MAG FSLGG RG+ SWF Y + PY+GFE Sbjct: 1 MAGLFSLGGGGGRGSNQEDDQQHNNNPPPPPTEIPQESWFWYKNEDV-------PYKGFE 53 Query: 344 LWXXXXXXXXXXXXXXH-NNPLQDFYPXXXXXXXXXXXXVNIIPDERSG--SFLMMTXXX 174 LW QD Y DE S +F+MM Sbjct: 54 LWQQQQQQQQEFFRHQSLQQQQQDLYSSAAGLGVGPSRSSINFSDESSSRSAFMMMRSSS 113 Query: 173 XXXXXXXGIVNCQDCGNQAKKDCSHMRCRTCCKSRGFQCQTHVKSTWVPASKRRERQ 3 ++CQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVPASKRRERQ Sbjct: 114 GGSS-----MSCQDCGNQAKKDCVHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQ 165 >ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|222836862|gb|EEE75255.1| short internodes 2 [Populus trichocarpa] Length = 344 Score = 114 bits (286), Expect = 1e-23 Identities = 65/142 (45%), Positives = 72/142 (50%), Gaps = 6/142 (4%) Frame = -3 Query: 410 WFLYNRNNPHDQHLPPPYRGFELWXXXXXXXXXXXXXXHNNPLQDFYPXXXXXXXXXXXX 231 WF Y + Y+GFELW NP QD Y Sbjct: 38 WFCYRSEDNS-------YKGFELWQQHHHHQELLHQRH-QNPQQDLYSSAVGLGVGPSRA 89 Query: 230 VNIIPDERSG------SFLMMTXXXXXXXXXXGIVNCQDCGNQAKKDCSHMRCRTCCKSR 69 I DE S +F+MM ++CQDCGNQAKKDC HMRCRTCCKSR Sbjct: 90 SINISDESSSRSAAAAAFMMMRPVGSGVGGS---ISCQDCGNQAKKDCVHMRCRTCCKSR 146 Query: 68 GFQCQTHVKSTWVPASKRRERQ 3 GF+CQTHVKSTWVPASKRRERQ Sbjct: 147 GFECQTHVKSTWVPASKRRERQ 168 >ref|XP_004174041.1| PREDICTED: uncharacterized protein LOC101232804, partial [Cucumis sativus] Length = 206 Score = 108 bits (271), Expect = 8e-22 Identities = 45/48 (93%), Positives = 48/48 (100%) Frame = -3 Query: 146 VNCQDCGNQAKKDCSHMRCRTCCKSRGFQCQTHVKSTWVPASKRRERQ 3 +NCQDCGNQAKKDCSH+RCRTCCKSRGFQCQTHVKSTWVPA+KRRERQ Sbjct: 9 MNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQ 56 >ref|XP_004173977.1| PREDICTED: uncharacterized protein LOC101224904, partial [Cucumis sativus] Length = 191 Score = 108 bits (271), Expect = 8e-22 Identities = 45/48 (93%), Positives = 48/48 (100%) Frame = -3 Query: 146 VNCQDCGNQAKKDCSHMRCRTCCKSRGFQCQTHVKSTWVPASKRRERQ 3 +NCQDCGNQAKKDCSH+RCRTCCKSRGFQCQTHVKSTWVPA+KRRERQ Sbjct: 98 MNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQ 145