BLASTX nr result

ID: Panax21_contig00026583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026583
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...   131   7e-29
emb|CBI38350.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002310443.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26

>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score =  131 bits (329), Expect = 7e-29
 Identities = 82/185 (44%), Positives = 104/185 (56%), Gaps = 15/185 (8%)
 Frame = +3

Query: 9   IYSHLPLFLGPPFLY---MDPEDDRNS-------DESYDAGTDYGGD----SDYS-PGFD 143
           I+  LPL L P FL    M+ EDD +        D+ Y   T    D    +DY     D
Sbjct: 49  IFFLLPL-LRPNFLQKKKMESEDDMHDANDAESLDDFYSGETAADSDDLDAADYEFIDND 107

Query: 144 SDHSDDLADHRQKKKTYTILNEEDIKRNQEEDXXXXXXXXXXXXXXXXILLHRFKWNVDD 323
           SD SDDL  HR ++  YTIL E DI++ QE+D                ILL  + W+V  
Sbjct: 108 SDDSDDLTSHRYQQN-YTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSK 166

Query: 324 VHESWFADEVKFQKSMGLLEYPVVKFSNSDELTCGICFNSYFRDEKINSAVFCCHSYCNT 503
           VH+ WFADE K +K++GLLE PVV+F N+ ELTCGICF +Y RD +I+SA  C H +C T
Sbjct: 167 VHDEWFADEEKVRKAVGLLEKPVVQFPNARELTCGICFENYPRD-RISSAA-CGHPFCGT 224

Query: 504 CWGGY 518
           CW GY
Sbjct: 225 CWAGY 229


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  129 bits (325), Expect = 2e-28
 Identities = 72/159 (45%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
 Frame = +3

Query: 57  DPEDDRNSDESYDAGTDYGGD----SDYS-PGFDSDHSDDLADHRQKKKTYTILNEEDIK 221
           D  D  + D+ Y   T    D    +DY     DSD SDDL  HR ++  YTIL E DI+
Sbjct: 3   DANDAESLDDFYSGETAADSDDLDAADYEFIDNDSDDSDDLTSHRYQQN-YTILTEADIR 61

Query: 222 RNQEEDXXXXXXXXXXXXXXXXILLHRFKWNVDDVHESWFADEVKFQKSMGLLEYPVVKF 401
           + QE+D                ILL  + W+V  VH+ WFADE K +K++GLLE PVV+F
Sbjct: 62  QRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGLLEKPVVQF 121

Query: 402 SNSDELTCGICFNSYFRDEKINSAVFCCHSYCNTCWGGY 518
            N+ ELTCGICF +Y RD +I+SA  C H +C TCW GY
Sbjct: 122 PNARELTCGICFENYPRD-RISSAA-CGHPFCGTCWAGY 158


>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/166 (40%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
 Frame = +3

Query: 45  FLYMDPEDDRNSDESYDAGTDYGGDSDYSP-------GFDSDHSDDLADHRQKKKTYTIL 203
           F   D   +   D+ Y  G + G DSD +          DSD SDDL  HR ++  YT+L
Sbjct: 7   FDMQDAAAESAEDDFYSGGEEDGFDSDDADVADYEFIDNDSDDSDDLISHRHQQN-YTVL 65

Query: 204 NEEDIKRNQEEDXXXXXXXXXXXXXXXXILLHRFKWNVDDVHESWFADEVKFQKSMGLLE 383
           +EEDI++ Q++D                ILL  + W+V  VH+ WFADE K +K++GLLE
Sbjct: 66  SEEDIRQRQDDDVMRIATVLSISKVAASILLRYYNWSVSKVHDEWFADEEKVRKAVGLLE 125

Query: 384 YPVVKFSNSDELTCGICFNSYFRDEKINSAVFCCHSYCNTCWGGYI 521
            PVV F +  E+TCGICF +Y  D  + +A  C H +CN+CW GYI
Sbjct: 126 EPVVPFPDGREMTCGICFETYPSDRLLAAA--CGHPFCNSCWAGYI 169


>ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|222852021|gb|EEE89568.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
 Frame = +3

Query: 57  DPEDDRNSDESYDAGTDYGGDSDYSP-------GFDSDHSDDLADHRQKKKTYTILNEED 215
           D   +   D+ Y  G + G DSD +          DSD SDDL  HR ++  YTIL+E D
Sbjct: 11  DAAAESAEDDFYSGGEEDGFDSDDADVADYEFIDNDSDDSDDLISHRYQQN-YTILSEGD 69

Query: 216 IKRNQEEDXXXXXXXXXXXXXXXXILLHRFKWNVDDVHESWFADEVKFQKSMGLLEYPVV 395
           I++ Q++D                ILL  + W+V  VH+ WFADE K ++++GLLE PVV
Sbjct: 70  IRQRQDDDIMRIATVLSISKVAATILLRYYNWSVSKVHDEWFADEEKVRRAVGLLEEPVV 129

Query: 396 KFSNSDELTCGICFNSYFRDEKINSAVFCCHSYCNTCWGGYI 521
            F +  E+TCGICF +Y  D     AV C H++CN+CW GYI
Sbjct: 130 PFPDGREMTCGICFETYPSDRL--RAVVCGHAFCNSCWAGYI 169


>ref|XP_002310443.1| predicted protein [Populus trichocarpa] gi|222853346|gb|EEE90893.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score =  124 bits (310), Expect = 1e-26
 Identities = 70/158 (44%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
 Frame = +3

Query: 63  EDDRNSDESYDAGTDYGGDSDYSPGFDS-----DHSDDLADHRQKKKTYTILNEEDIKRN 227
           EDD  SD  Y    D   D D  P +D      D +DDL+   Q+  +YT+L EEDI   
Sbjct: 26  EDDDYSDGDYYDNDDVDDDDD-GPDYDFMAEAVDDTDDLSFRFQQ--SYTVLKEEDILNR 82

Query: 228 QEEDXXXXXXXXXXXXXXXXILLHRFKWNVDDVHESWFADEVKFQKSMGLLEYPVVKFSN 407
           QE+D                ILL  + W+V  VH++WFADE   +KS+GLL+  VV+FSN
Sbjct: 83  QEDDVTRVSTVLSITRVAASILLRHYNWSVSKVHDAWFADEDAVRKSVGLLDKQVVQFSN 142

Query: 408 SDELTCGICFNSYFRDEKINSAVFCCHSYCNTCWGGYI 521
           + ELTCGICF S   D+ I++A  C H +CNTCW GYI
Sbjct: 143 ARELTCGICFESIPCDKIISAA--CGHPFCNTCWSGYI 178


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