BLASTX nr result
ID: Panax21_contig00026578
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00026578
(440 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002304277.1| predicted protein [Populus trichocarpa] gi|2... 124 2e-33
ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811... 120 5e-31
ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795... 117 3e-30
ref|XP_002326642.1| predicted protein [Populus trichocarpa] gi|2... 110 6e-29
ref|XP_003611309.1| COPII coat assembly protein sec16 [Medicago ... 114 8e-29
>ref|XP_002304277.1| predicted protein [Populus trichocarpa] gi|222841709|gb|EEE79256.1|
predicted protein [Populus trichocarpa]
Length = 1362
Score = 124 bits (312), Expect(2) = 2e-33
Identities = 65/127 (51%), Positives = 85/127 (66%)
Frame = +3
Query: 57 TPSVPSIKPKSNSNPKFFVPTPVSSVEQPVNATADNIQQNTSGNENPSVSSMNNNSFQSF 236
+PSVPS+KP +N KFFVPTP E + A A+NIQ++++ ENPS S+MN N
Sbjct: 1208 SPSVPSVKPAVAANAKFFVPTPAPPHEYSMEAIAENIQEDSATTENPSTSNMNKNGPSHP 1267
Query: 237 GPPSPPNMQRFASMGSISNKGTPSTGNGSGSLSSHSRRTASWSGSFAESLSPPSRAEMKP 416
S MQRF+S+ +I+ KG + NG+G +SSHSRRTASWSGSF++S SPP E K
Sbjct: 1268 STSSALTMQRFSSVDNITRKG--AMINGNGPVSSHSRRTASWSGSFSDSFSPPKAVESKS 1325
Query: 417 LGEVLGM 437
GE+L M
Sbjct: 1326 QGEMLSM 1332
Score = 42.7 bits (99), Expect(2) = 2e-33
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 1 RYVDTFNQGGGNPANLFQS 57
RYVDTFNQGGG+PANLFQS
Sbjct: 1190 RYVDTFNQGGGSPANLFQS 1208
>ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811102 [Glycine max]
Length = 1423
Score = 120 bits (300), Expect(2) = 5e-31
Identities = 67/129 (51%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = +3
Query: 57 TPSVPSIKPKSNSNPKFFVPTPV-SSVEQPVNATADNIQQNTSGNENPSVSSMNNNSFQS 233
+PSVPS+KP +N KFFVPTP SS EQ ++A A+ Q++++ NE PS S+ N+ S++S
Sbjct: 1269 SPSVPSVKPALAANAKFFVPTPAPSSNEQAMDAIAEGKQEDSATNEYPSTSATNDWSYRS 1328
Query: 234 FGPPSPPNMQRFASMGSISNKGTPSTGNGSGSLSSHSRRTASWSGSFAESLSPPSRAEMK 413
S +QRF SMG+IS +G GS S HSRRTASWSGSF +S +P MK
Sbjct: 1329 PKHVSSTAIQRFPSMGNISKQGATE---GSNSHLPHSRRTASWSGSFNDSFTPQKMGNMK 1385
Query: 414 PLGEVLGMP 440
PLGE LGMP
Sbjct: 1386 PLGEALGMP 1394
Score = 39.3 bits (90), Expect(2) = 5e-31
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 1 RYVDTFNQGGGNPANLFQS 57
RYVDTFNQGGG ANLFQS
Sbjct: 1251 RYVDTFNQGGGTSANLFQS 1269
>ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795053 [Glycine max]
Length = 1424
Score = 117 bits (293), Expect(2) = 3e-30
Identities = 64/129 (49%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Frame = +3
Query: 57 TPSVPSIKPKSNSNPKFFVPTPV-SSVEQPVNATADNIQQNTSGNENPSVSSMNNNSFQS 233
+PSVPS+KP +N KFFVPTP SS E+ + A ++ Q++ + NE PS+S+ N S+QS
Sbjct: 1270 SPSVPSVKPVLAANAKFFVPTPAPSSNERTIEAIVESKQEDNATNEYPSISTTNEWSYQS 1329
Query: 234 FGPPSPPNMQRFASMGSISNKGTPSTGNGSGSLSSHSRRTASWSGSFAESLSPPSRAEMK 413
S +QRF SMG+ISN+ +G+ S HSRRTASWSGSF +S +P +K
Sbjct: 1330 PKHVSSTTIQRFPSMGNISNQ---VAADGNNSHLPHSRRTASWSGSFNDSFTPQKMGNIK 1386
Query: 414 PLGEVLGMP 440
PLGE LGMP
Sbjct: 1387 PLGEALGMP 1395
Score = 39.3 bits (90), Expect(2) = 3e-30
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 1 RYVDTFNQGGGNPANLFQS 57
RYVDTFNQGGG ANLFQS
Sbjct: 1252 RYVDTFNQGGGTSANLFQS 1270
>ref|XP_002326642.1| predicted protein [Populus trichocarpa] gi|222833964|gb|EEE72441.1|
predicted protein [Populus trichocarpa]
Length = 1379
Score = 110 bits (274), Expect(2) = 6e-29
Identities = 67/140 (47%), Positives = 85/140 (60%), Gaps = 5/140 (3%)
Frame = +3
Query: 33 KPSKLVPVTPSVPSIKPKSNSNPKFFVPTPVS----SVEQPVNATADNIQQNTSGNENPS 200
KP+ L +PSVPS+KP SN KFFVP P S+E + A A+NIQ++++ E PS
Sbjct: 1213 KPANLFQ-SPSVPSVKPAVASNAKFFVPAPAPAPAPSLEYSMEAIAENIQEDSATTEKPS 1271
Query: 201 VSSMNNNSF-QSFGPPSPPNMQRFASMGSISNKGTPSTGNGSGSLSSHSRRTASWSGSFA 377
+M N + Q S MQRF SM +I+ KG NG +SS+SRRTASWSGSF+
Sbjct: 1272 TFNMKENDYPQPSTSSSAMAMQRFPSMDNITRKG--GMINGKDLVSSNSRRTASWSGSFS 1329
Query: 378 ESLSPPSRAEMKPLGEVLGM 437
+S SPP E K GE LGM
Sbjct: 1330 DSFSPPKVMESKSPGEALGM 1349
Score = 42.4 bits (98), Expect(2) = 6e-29
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 1 RYVDTFNQGGGNPANLFQS 57
RYVDTFNQGGG PANLFQS
Sbjct: 1202 RYVDTFNQGGGKPANLFQS 1220
>ref|XP_003611309.1| COPII coat assembly protein sec16 [Medicago truncatula]
gi|355512644|gb|AES94267.1| COPII coat assembly protein
sec16 [Medicago truncatula]
Length = 1584
Score = 114 bits (286), Expect(2) = 8e-29
Identities = 64/129 (49%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +3
Query: 57 TPSVPSIKPKSNSNPKFFVPTPV-SSVEQPVNATADNIQQNTSGNENPSVSSMNNNSFQS 233
+PSV S+KP +N KFF+P PV SS EQ + A A++ ++++ NENPS SS N+ S+
Sbjct: 1429 SPSVQSVKPALPANAKFFIPAPVPSSSEQNMEAIAESNLEDSAANENPSTSSTNDWSYHP 1488
Query: 234 FGPPSPPNMQRFASMGSISNKGTPSTGNGSGSLSSHSRRTASWSGSFAESLSPPSRAEMK 413
MQRF S G+IS +G +G+ S SHSRRTASWSGSF +S SPP E+K
Sbjct: 1489 PKHAQTMTMQRFPSAGNISKQGQT---DGNESHFSHSRRTASWSGSFNDSFSPPKMGEIK 1545
Query: 414 PLGEVLGMP 440
P G LGMP
Sbjct: 1546 PSGAALGMP 1554
Score = 37.4 bits (85), Expect(2) = 8e-29
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 1 RYVDTFNQGGGNPANLFQS 57
RYVDTFNQ GG+ ANLFQS
Sbjct: 1411 RYVDTFNQNGGSSANLFQS 1429