BLASTX nr result

ID: Panax21_contig00026563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026563
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
emb|CAN63280.1| hypothetical protein VITISV_010196 [Vitis vinifera]    99   9e-19
emb|CBI16670.3| unnamed protein product [Vitis vinifera]               98   2e-18
ref|XP_002511580.1| RING finger protein, putative [Ricinus commu...    97   2e-18
ref|NP_001241545.1| uncharacterized protein LOC100791789 [Glycin...    94   2e-17

>ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|222844222|gb|EEE81769.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  100 bits (249), Expect = 2e-19
 Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
 Frame = +2

Query: 2   VGKYSQLNSSKLEVNEEEGLLHSDSENIRKQKFEAILKLQQENNGLIEPKKTEVLLSGMF 181
           VG  +    S+ E+  EE LLHSDSEN R+QKFEAILKLQQEN+GLIEPK+  V++ G++
Sbjct: 223 VGTQASQLDSEAEIKYEEKLLHSDSENFRRQKFEAILKLQQENSGLIEPKREIVVVPGIY 282

Query: 182 LPRSIEXXXXXXXDSANESNEQQNTTSAHNTETN-SNVANWPCSSRHKNSGTRKHRGHQN 358
           LP+              E+ E Q T +  +TETN  +  N P     +NSG R  +G +N
Sbjct: 283 LPQRATSAAQTVN---KETAEHQGTEARPSTETNLGSSLNRPRPRESRNSGRR--QGVRN 337

Query: 359 SRKQGNRQWIKKENDTTN 412
           SR+  + QW+++EN T +
Sbjct: 338 SRRPVS-QWVRRENGTAD 354


>emb|CAN63280.1| hypothetical protein VITISV_010196 [Vitis vinifera]
          Length = 503

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 60/131 (45%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = +2

Query: 23  NSSKLEVNEEEGLLHSDSENIRKQKFEAILKLQQENNGLIEPKKTEVLLSGMFLPRSIEX 202
           +SS  E+ ++E LLHSDSE  R+ KFEA+LKLQ+EN+GLIEPKK  V++ GMFL R I  
Sbjct: 377 SSSGTEITDDEKLLHSDSELTRRLKFEAVLKLQEENSGLIEPKKNGVIVPGMFLQRPI-- 434

Query: 203 XXXXXXDSANESNEQQNTTSAHNTETNSNVANWPCS-SRHKNSGTRKHRGHQNSRKQGNR 379
                  +   ++EQQ       +ET+S+ ++   S S  +N G R+HR  +NSRK   +
Sbjct: 435 APPPALSAKGPTSEQQQRDPIIFSETSSSGSSSTASTSEQRNLGMRRHR-VRNSRKP-VK 492

Query: 380 QWIKKENDTTN 412
           QW+KK+N  TN
Sbjct: 493 QWVKKDNTPTN 503


>emb|CBI16670.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
 Frame = +2

Query: 14  SQLNSSKLEVNEEEGLLHSDSENIRKQKFEAILKLQQENNGLIEPKKTEVLLSGMFLPRS 193
           S L+S+  E+ ++E LLHSDSE  R+ KFEA+LKLQ+EN+GLIEPKK  V++ GMFL R 
Sbjct: 225 SNLSSNGTEITDDEKLLHSDSELTRRLKFEAVLKLQEENSGLIEPKKNGVIVPGMFLQRP 284

Query: 194 IEXXXXXXXDSANESNEQQNTTSAHNTETNSNVANWPCS-SRHKNSGTRKHRGHQNSRKQ 370
           I         +   ++EQQ   +   +ET+S+ ++   S S  +N G R+HR  +NSRK 
Sbjct: 285 I--APPPALSAKGPTSEQQQRDAITFSETSSSGSSSRASTSEQRNLGMRRHR-VRNSRKP 341

Query: 371 GNRQWIKKEN 400
             +QW+KK+N
Sbjct: 342 -VKQWVKKDN 350


>ref|XP_002511580.1| RING finger protein, putative [Ricinus communis]
           gi|223548760|gb|EEF50249.1| RING finger protein,
           putative [Ricinus communis]
          Length = 355

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 58/132 (43%), Positives = 83/132 (62%)
 Frame = +2

Query: 17  QLNSSKLEVNEEEGLLHSDSENIRKQKFEAILKLQQENNGLIEPKKTEVLLSGMFLPRSI 196
           +L+S + EVN+E  LL SDSE+IR+QKFEA+LKLQQENNGLIEPKK+ V+L GM+LP+ +
Sbjct: 230 ELSSDRKEVNKE--LLQSDSESIRRQKFEALLKLQQENNGLIEPKKSLVVLPGMYLPQPV 287

Query: 197 EXXXXXXXDSANESNEQQNTTSAHNTETNSNVANWPCSSRHKNSGTRKHRGHQNSRKQGN 376
                          ++ +  S      +S  +N P     +N G R+ +  QN+RKQ  
Sbjct: 288 TVPAQMVNKETTVETQRDSRVSMETKTGDS--SNKPSPRERRNLG-RRMQVTQNARKQ-V 343

Query: 377 RQWIKKENDTTN 412
           RQW++KE+  +N
Sbjct: 344 RQWVRKEDGPSN 355


>ref|NP_001241545.1| uncharacterized protein LOC100791789 [Glycine max]
           gi|255644864|gb|ACU22932.1| unknown [Glycine max]
          Length = 366

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 54/144 (37%), Positives = 82/144 (56%), Gaps = 11/144 (7%)
 Frame = +2

Query: 2   VGKYS-QLNSSKLEVNEEEGLLHSDSENIRKQKFEAILKLQQENNGLIEPKKTEVLLSGM 178
           VG YS QL+S   E+NEEE LL S+ E  R+QK+EAIL LQ+EN+GLIEPKK  V+L GM
Sbjct: 218 VGSYSSQLSSDNEELNEEEKLLQSEDEINRRQKYEAILNLQKENSGLIEPKKEMVILPGM 277

Query: 179 FLPRSIEXXXXXXXDSANESNEQQNTTSAHNTET-NSNVANWPCSSRHKNSGTRKHRGH- 352
           +LP+ +          ++E  ++             ++ ++ P SSR +N G R+ +   
Sbjct: 278 YLPQPVAMPSSTPTKESDEPQQKDPPAVVPEKHAGGTSNSSIPSSSRQRNFGARRQKARS 337

Query: 353 --------QNSRKQGNRQWIKKEN 400
                   +N RK   +QW++++N
Sbjct: 338 DNHSSSTARNPRKPAQQQWVRRDN 361


Top