BLASTX nr result
ID: Panax21_contig00026528
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00026528 (483 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 170 1e-40 ref|XP_002517194.1| protein binding protein, putative [Ricinus c... 169 3e-40 ref|XP_004162475.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 162 3e-38 ref|XP_004149264.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 162 3e-38 ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|2... 160 1e-37 >ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera] gi|297737001|emb|CBI26202.3| unnamed protein product [Vitis vinifera] Length = 391 Score = 170 bits (430), Expect = 1e-40 Identities = 93/170 (54%), Positives = 113/170 (66%), Gaps = 21/170 (12%) Frame = +2 Query: 35 ADTDSFDDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEP 214 A D+ +D CSICLEPF+ T DP T+TNC+HEYHLQCILEWSQRSKECPICWQFL L++P Sbjct: 20 AADDASEDSCSICLEPFS-TDDPATITNCRHEYHLQCILEWSQRSKECPICWQFLVLQDP 78 Query: 215 ASQELLAAVLNERSLRSRIK-------VHYIYEDHEINRVDAPYEDVSEFDERIMRNFAA 373 SQELLAAV ERS RSR +H+ D + DA Y D S+ DE IM++ A Sbjct: 79 TSQELLAAVEGERSPRSRNSSPTESTFLHHFQGDFGYDH-DASYSDDSDLDEHIMQHVVA 137 Query: 374 AASRIRSVNRRERKRSSGVGPSQ--------------VHLSSPEEFQVSG 481 AAS V+RRER+RSSG+GPS+ ++ SPEE+Q SG Sbjct: 138 AASGAPYVHRRERQRSSGLGPSESLVFPPTDVPDVQTINTPSPEEYQNSG 187 >ref|XP_002517194.1| protein binding protein, putative [Ricinus communis] gi|223543829|gb|EEF45357.1| protein binding protein, putative [Ricinus communis] Length = 414 Score = 169 bits (427), Expect = 3e-40 Identities = 87/138 (63%), Positives = 102/138 (73%), Gaps = 5/138 (3%) Frame = +2 Query: 44 DSFDDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEPASQ 223 DSF+D CSICLEPF +Q+P TVT+CKHEYHLQCILEWSQRSKECPICWQ L L+EPA Q Sbjct: 48 DSFEDCCSICLEPFT-SQNPSTVTSCKHEYHLQCILEWSQRSKECPICWQLLVLQEPACQ 106 Query: 224 ELLAAVLNERSLRSRIKVHYIYED-----HEINRVDAPYEDVSEFDERIMRNFAAAASRI 388 ELLAAV ER LRSR + + +I+ Y D S+FDERIM++ AA ASR Sbjct: 107 ELLAAVETERRLRSRNTPSAAFSNPTRFHEDIDVEQDSYSDDSDFDERIMQHLAAVASRA 166 Query: 389 RSVNRRERKRSSGVGPSQ 442 R + RRER+RSSG GPS+ Sbjct: 167 RYICRRERQRSSGQGPSR 184 >ref|XP_004162475.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Cucumis sativus] Length = 216 Score = 162 bits (410), Expect = 3e-38 Identities = 84/150 (56%), Positives = 107/150 (71%), Gaps = 7/150 (4%) Frame = +2 Query: 35 ADTDSFDDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEP 214 A D FDDVC ICL+PF + DP T+T+CKHEYHLQCIL+WSQRS ECPIC Q L LK+P Sbjct: 24 ASDDDFDDVCCICLDPFT-SDDPATITSCKHEYHLQCILDWSQRSDECPICCQLLVLKDP 82 Query: 215 ASQELLAAVLNERSLRSR-------IKVHYIYEDHEINRVDAPYEDVSEFDERIMRNFAA 373 QELLAA+ +ER L+SR +H+ +E+ + + D+ + D S+FD+ IM++ AA Sbjct: 83 VGQELLAAMASERLLKSRSLSSAASTSLHF-HENFDFDH-DSVHSDDSDFDDLIMQHLAA 140 Query: 374 AASRIRSVNRRERKRSSGVGPSQVHLSSPE 463 AASR R V RRER+R GVGPSQV + PE Sbjct: 141 AASRARYVQRRERQRHFGVGPSQVSSACPE 170 >ref|XP_004149264.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Cucumis sativus] Length = 365 Score = 162 bits (410), Expect = 3e-38 Identities = 84/150 (56%), Positives = 107/150 (71%), Gaps = 7/150 (4%) Frame = +2 Query: 35 ADTDSFDDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEP 214 A D FDDVC ICL+PF + DP T+T+CKHEYHLQCIL+WSQRS ECPIC Q L LK+P Sbjct: 24 ASDDDFDDVCCICLDPFT-SDDPATITSCKHEYHLQCILDWSQRSDECPICCQLLVLKDP 82 Query: 215 ASQELLAAVLNERSLRSR-------IKVHYIYEDHEINRVDAPYEDVSEFDERIMRNFAA 373 QELLAA+ +ER L+SR +H+ +E+ + + D+ + D S+FD+ IM++ AA Sbjct: 83 VGQELLAAMASERLLKSRGLSSAASTSLHF-HENFDFDH-DSVHSDDSDFDDLIMQHLAA 140 Query: 374 AASRIRSVNRRERKRSSGVGPSQVHLSSPE 463 AASR R V RRER+R GVGPSQV + PE Sbjct: 141 AASRARYVQRRERQRHFGVGPSQVSSACPE 170 >ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|222863759|gb|EEF00890.1| predicted protein [Populus trichocarpa] Length = 418 Score = 160 bits (405), Expect = 1e-37 Identities = 91/149 (61%), Positives = 109/149 (73%), Gaps = 9/149 (6%) Frame = +2 Query: 44 DSF-DDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEPAS 220 D+F DD CSICL+PF QDP TVT C HEYHLQCILEWSQRSKECPICWQ L LK+ AS Sbjct: 38 DAFEDDSCSICLDPFT-AQDPATVTCCNHEYHLQCILEWSQRSKECPICWQLLVLKDHAS 96 Query: 221 QELLAAVLNERSLRSR------IKVHYIYEDHEINRVDAPYEDVSEFDERIMRNFAAAA- 379 QELLAAV ER LRSR + V ++ +D++I + Y D S+FDE IM++ AAAA Sbjct: 97 QELLAAVETERLLRSRNSTPASMIVPHLDDDYDIEQ--DSYSDDSDFDEHIMQHLAAAAS 154 Query: 380 SRIRSVNRRERKRSSGVGPSQV-HLSSPE 463 SR V+ RER+RS+G+GPSQV +SPE Sbjct: 155 SRAHHVHERERQRSNGLGPSQVIAFTSPE 183