BLASTX nr result

ID: Panax21_contig00026528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026528
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   170   1e-40
ref|XP_002517194.1| protein binding protein, putative [Ricinus c...   169   3e-40
ref|XP_004162475.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   162   3e-38
ref|XP_004149264.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   162   3e-38
ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
           gi|297737001|emb|CBI26202.3| unnamed protein product
           [Vitis vinifera]
          Length = 391

 Score =  170 bits (430), Expect = 1e-40
 Identities = 93/170 (54%), Positives = 113/170 (66%), Gaps = 21/170 (12%)
 Frame = +2

Query: 35  ADTDSFDDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEP 214
           A  D+ +D CSICLEPF+ T DP T+TNC+HEYHLQCILEWSQRSKECPICWQFL L++P
Sbjct: 20  AADDASEDSCSICLEPFS-TDDPATITNCRHEYHLQCILEWSQRSKECPICWQFLVLQDP 78

Query: 215 ASQELLAAVLNERSLRSRIK-------VHYIYEDHEINRVDAPYEDVSEFDERIMRNFAA 373
            SQELLAAV  ERS RSR         +H+   D   +  DA Y D S+ DE IM++  A
Sbjct: 79  TSQELLAAVEGERSPRSRNSSPTESTFLHHFQGDFGYDH-DASYSDDSDLDEHIMQHVVA 137

Query: 374 AASRIRSVNRRERKRSSGVGPSQ--------------VHLSSPEEFQVSG 481
           AAS    V+RRER+RSSG+GPS+              ++  SPEE+Q SG
Sbjct: 138 AASGAPYVHRRERQRSSGLGPSESLVFPPTDVPDVQTINTPSPEEYQNSG 187


>ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
           gi|223543829|gb|EEF45357.1| protein binding protein,
           putative [Ricinus communis]
          Length = 414

 Score =  169 bits (427), Expect = 3e-40
 Identities = 87/138 (63%), Positives = 102/138 (73%), Gaps = 5/138 (3%)
 Frame = +2

Query: 44  DSFDDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEPASQ 223
           DSF+D CSICLEPF  +Q+P TVT+CKHEYHLQCILEWSQRSKECPICWQ L L+EPA Q
Sbjct: 48  DSFEDCCSICLEPFT-SQNPSTVTSCKHEYHLQCILEWSQRSKECPICWQLLVLQEPACQ 106

Query: 224 ELLAAVLNERSLRSRIKVHYIYED-----HEINRVDAPYEDVSEFDERIMRNFAAAASRI 388
           ELLAAV  ER LRSR      + +      +I+     Y D S+FDERIM++ AA ASR 
Sbjct: 107 ELLAAVETERRLRSRNTPSAAFSNPTRFHEDIDVEQDSYSDDSDFDERIMQHLAAVASRA 166

Query: 389 RSVNRRERKRSSGVGPSQ 442
           R + RRER+RSSG GPS+
Sbjct: 167 RYICRRERQRSSGQGPSR 184


>ref|XP_004162475.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Cucumis sativus]
          Length = 216

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/150 (56%), Positives = 107/150 (71%), Gaps = 7/150 (4%)
 Frame = +2

Query: 35  ADTDSFDDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEP 214
           A  D FDDVC ICL+PF  + DP T+T+CKHEYHLQCIL+WSQRS ECPIC Q L LK+P
Sbjct: 24  ASDDDFDDVCCICLDPFT-SDDPATITSCKHEYHLQCILDWSQRSDECPICCQLLVLKDP 82

Query: 215 ASQELLAAVLNERSLRSR-------IKVHYIYEDHEINRVDAPYEDVSEFDERIMRNFAA 373
             QELLAA+ +ER L+SR         +H+ +E+ + +  D+ + D S+FD+ IM++ AA
Sbjct: 83  VGQELLAAMASERLLKSRSLSSAASTSLHF-HENFDFDH-DSVHSDDSDFDDLIMQHLAA 140

Query: 374 AASRIRSVNRRERKRSSGVGPSQVHLSSPE 463
           AASR R V RRER+R  GVGPSQV  + PE
Sbjct: 141 AASRARYVQRRERQRHFGVGPSQVSSACPE 170


>ref|XP_004149264.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Cucumis sativus]
          Length = 365

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/150 (56%), Positives = 107/150 (71%), Gaps = 7/150 (4%)
 Frame = +2

Query: 35  ADTDSFDDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEP 214
           A  D FDDVC ICL+PF  + DP T+T+CKHEYHLQCIL+WSQRS ECPIC Q L LK+P
Sbjct: 24  ASDDDFDDVCCICLDPFT-SDDPATITSCKHEYHLQCILDWSQRSDECPICCQLLVLKDP 82

Query: 215 ASQELLAAVLNERSLRSR-------IKVHYIYEDHEINRVDAPYEDVSEFDERIMRNFAA 373
             QELLAA+ +ER L+SR         +H+ +E+ + +  D+ + D S+FD+ IM++ AA
Sbjct: 83  VGQELLAAMASERLLKSRGLSSAASTSLHF-HENFDFDH-DSVHSDDSDFDDLIMQHLAA 140

Query: 374 AASRIRSVNRRERKRSSGVGPSQVHLSSPE 463
           AASR R V RRER+R  GVGPSQV  + PE
Sbjct: 141 AASRARYVQRRERQRHFGVGPSQVSSACPE 170


>ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|222863759|gb|EEF00890.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  160 bits (405), Expect = 1e-37
 Identities = 91/149 (61%), Positives = 109/149 (73%), Gaps = 9/149 (6%)
 Frame = +2

Query: 44  DSF-DDVCSICLEPFNLTQDPPTVTNCKHEYHLQCILEWSQRSKECPICWQFLALKEPAS 220
           D+F DD CSICL+PF   QDP TVT C HEYHLQCILEWSQRSKECPICWQ L LK+ AS
Sbjct: 38  DAFEDDSCSICLDPFT-AQDPATVTCCNHEYHLQCILEWSQRSKECPICWQLLVLKDHAS 96

Query: 221 QELLAAVLNERSLRSR------IKVHYIYEDHEINRVDAPYEDVSEFDERIMRNFAAAA- 379
           QELLAAV  ER LRSR      + V ++ +D++I +    Y D S+FDE IM++ AAAA 
Sbjct: 97  QELLAAVETERLLRSRNSTPASMIVPHLDDDYDIEQ--DSYSDDSDFDEHIMQHLAAAAS 154

Query: 380 SRIRSVNRRERKRSSGVGPSQV-HLSSPE 463
           SR   V+ RER+RS+G+GPSQV   +SPE
Sbjct: 155 SRAHHVHERERQRSNGLGPSQVIAFTSPE 183


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