BLASTX nr result

ID: Panax21_contig00026515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026515
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan pr...    65   9e-20
dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hy...    65   9e-20
emb|CAN65447.1| hypothetical protein VITISV_011425 [Vitis vinifera]    65   9e-20
ref|XP_003623747.1| Fasciclin-like arabinogalactan protein [Medi...    59   2e-17
ref|XP_002320736.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-17

>ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan protein 10-like [Vitis
           vinifera]
          Length = 416

 Score = 65.5 bits (158), Expect(2) = 9e-20
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   KLTNAELVSLLQYHALASYSPIGTLKSSKDPISTLA 108
           KLTNAELV+LLQYHA+A+YSPIG+LK+SKDPISTLA
Sbjct: 238 KLTNAELVTLLQYHAVAAYSPIGSLKTSKDPISTLA 273



 Score = 56.2 bits (134), Expect(2) = 9e-20
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = +2

Query: 110 NGAGKYDLKVQTAGDSVSLSTGLDTSRIAETVRLRLRPIQVQLRNLSRLPRPSNSTSESP 289
           +GAGKYDL V TAGDSV+L TG+D+SR+A+TV   L    + L  +  L  P+    +SP
Sbjct: 275 SGAGKYDLTVSTAGDSVTLKTGVDSSRVADTV---LDATPLCLFTVDNLLLPTELFGKSP 331

Query: 290 NQSPA 304
           + +PA
Sbjct: 332 SPAPA 336


>dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hybrid cultivar]
          Length = 416

 Score = 65.5 bits (158), Expect(2) = 9e-20
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   KLTNAELVSLLQYHALASYSPIGTLKSSKDPISTLA 108
           KLTNAELV+LLQYHA+A+YSPIG+LK+SKDPISTLA
Sbjct: 238 KLTNAELVTLLQYHAVAAYSPIGSLKTSKDPISTLA 273



 Score = 56.2 bits (134), Expect(2) = 9e-20
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = +2

Query: 110 NGAGKYDLKVQTAGDSVSLSTGLDTSRIAETVRLRLRPIQVQLRNLSRLPRPSNSTSESP 289
           +GAGKYDL V TAGDSV+L TG+D+SR+A+TV   L    + L  +  L  P+    +SP
Sbjct: 275 SGAGKYDLTVSTAGDSVTLKTGVDSSRVADTV---LDATPLCLFTVDNLLLPTELFGKSP 331

Query: 290 NQSPA 304
           + +PA
Sbjct: 332 SPAPA 336


>emb|CAN65447.1| hypothetical protein VITISV_011425 [Vitis vinifera]
          Length = 416

 Score = 65.5 bits (158), Expect(2) = 9e-20
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   KLTNAELVSLLQYHALASYSPIGTLKSSKDPISTLA 108
           KLTNAELV+LLQYHA+A+YSPIG+LK+SKDPISTLA
Sbjct: 238 KLTNAELVTLLQYHAVAAYSPIGSLKTSKDPISTLA 273



 Score = 56.2 bits (134), Expect(2) = 9e-20
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = +2

Query: 110 NGAGKYDLKVQTAGDSVSLSTGLDTSRIAETVRLRLRPIQVQLRNLSRLPRPSNSTSESP 289
           +GAGKYDL V TAGDSV+L TG+D+SR+A+TV   L    + L  +  L  P+    +SP
Sbjct: 275 SGAGKYDLTVSTAGDSVTLKTGVDSSRVADTV---LDATPLCLFTVDNLLLPTELFGKSP 331

Query: 290 NQSPA 304
           + +PA
Sbjct: 332 SPAPA 336


>ref|XP_003623747.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355498762|gb|AES79965.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 414

 Score = 58.9 bits (141), Expect(2) = 2e-17
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +1

Query: 1   KLTNAELVSLLQYHALASYSPIGTLKSSKDPISTLA 108
           KL+NAELVSLLQYHA A Y PIG+LK++KDPIS+LA
Sbjct: 238 KLSNAELVSLLQYHAAAKYLPIGSLKTTKDPISSLA 273



 Score = 55.1 bits (131), Expect(2) = 2e-17
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = +2

Query: 110 NGAGKYDLKVQTAGDSVSLSTGLDTSRIAETVRLRLRPIQVQLRNLSRLPRPSNSTSESP 289
           NGAGK+D  V TAGDSV+L TG+D+SRIA+++ L   P+ +   +   LP    +TS SP
Sbjct: 275 NGAGKFDYTVTTAGDSVTLHTGVDSSRIADSI-LDSTPLAIYSVDSVLLPSELFATSPSP 333

Query: 290 NQSPA 304
              PA
Sbjct: 334 APEPA 338


>ref|XP_002320736.1| predicted protein [Populus trichocarpa] gi|222861509|gb|EEE99051.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score = 63.5 bits (153), Expect(2) = 2e-17
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 1   KLTNAELVSLLQYHALASYSPIGTLKSSKDPISTLA 108
           KLTNAE+VSLLQYHA A+YSP G+LK+SKDPISTLA
Sbjct: 241 KLTNAEIVSLLQYHATATYSPFGSLKTSKDPISTLA 276



 Score = 50.1 bits (118), Expect(2) = 2e-17
 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
 Frame = +2

Query: 110 NGAGKYDLKVQTAGDSVSLSTGLDTSRIAETVRLRLRP----------IQVQLRNLSRLP 259
           NGAGK+DL V +AGDSV+L TG+  SR+AETV L   P          + V+L   +  P
Sbjct: 278 NGAGKFDLTVTSAGDSVTLHTGIGPSRVAETV-LDSTPLVIFTVDNVLLPVELFGKAPSP 336

Query: 260 RPSNSTSESPNQSP 301
            P+     +P+ SP
Sbjct: 337 APAGEPVSAPSPSP 350


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