BLASTX nr result

ID: Panax21_contig00026503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026503
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]   184   7e-90
ref|XP_002270833.2| PREDICTED: two-component response regulator ...   182   2e-89
ref|XP_002523510.1| two-component system sensor histidine kinase...   183   7e-87
ref|XP_004146697.1| PREDICTED: two-component response regulator ...   157   1e-73
ref|XP_002325148.1| type-b response regulator [Populus trichocar...   150   2e-72

>emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
          Length = 706

 Score =  184 bits (466), Expect(2) = 7e-90
 Identities = 101/196 (51%), Positives = 130/196 (66%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 NTVAALGGKDASYMRMGTLDELGDFRTLAGSGRLSNTGLSSYSPSGMLGRLNRPVGVSLC 408
           N VAA G KD+SYMRMG+LD  GDFR LAG GRL++T +SSY PSGMLGRLN P G+SL 
Sbjct: 295 NXVAAFGAKDSSYMRMGSLDGFGDFRGLAGPGRLNSTAMSSYPPSGMLGRLNSPAGLSLR 354

Query: 407 GSLTSSAVIQPSHAQNLSNSINALGKFQSFVSPAQQNPNLFQEIPSSLELDQFQQSKS-T 231
           G LTSS +IQ  HAQN SNS+N  GK Q  V P  Q+ +LFQ IP+SLELDQ QQ K  +
Sbjct: 355 G-LTSSGLIQTGHAQNSSNSVNTHGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCIS 413

Query: 230 ARVVDFNPADNHINFAVSNTFTDTRVRGGTLNNVLTAGQSNSLVLQGNTQRTQNGIGFIN 51
            ++ +F+  DN   F  +N F D+R+   + +N L+   SN L+LQ N Q+T    G  N
Sbjct: 414 TQIGEFSSVDNTTVFTTANGFPDSRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLAN 473

Query: 50  QSSINMASFNSDSFNI 3
           QSS+   + N + + +
Sbjct: 474 QSSLKAVTLNPEPYTM 489



 Score =  174 bits (441), Expect(2) = 7e-90
 Identities = 96/147 (65%), Positives = 108/147 (73%), Gaps = 5/147 (3%)
 Frame = -1

Query: 1014 LRNIWQHVIRRKKVDFKLHDKS-NXXXXXXXXXXXXXGPALTGNADQNGKINRKRKXXXX 838
            L+NIWQHVIRRKK+D K  +KS +             GP  + NADQNGK+NRKRK    
Sbjct: 148  LKNIWQHVIRRKKIDSKDQNKSADQDNALHADGEGGEGPPSSSNADQNGKLNRKRKDQNE 207

Query: 837  XXXXXXXXXXD----PSTQKKPRVVWSIELHRKFVAAVNQLGLEKAVPKRILDLMNVEGL 670
                      +    PS+QKKPRVVWS+ELHRKFVAAVNQLG+EKAVPKRILDLMNVEGL
Sbjct: 208  DEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVEGL 267

Query: 669  TRENVASHLQKYRLYLKRINSVASQQA 589
            TRENVASHLQKYRLYLKRI+ VA+QQA
Sbjct: 268  TRENVASHLQKYRLYLKRISCVATQQA 294


>ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
           vinifera]
          Length = 712

 Score =  182 bits (462), Expect(2) = 2e-89
 Identities = 104/197 (52%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
 Frame = -2

Query: 587 NTVAALGGKDASYMRMGTLDELGDFRTLAGSGRLSNTGLSSYSPSGMLGRLNRPVGVSLC 408
           N VAA G KD+SYMRMG+LD  GDFR LAG GRL++T +SSY PSGMLGRLN P G+SL 
Sbjct: 279 NMVAAFGAKDSSYMRMGSLDGFGDFRGLAGPGRLNSTAMSSYPPSGMLGRLNSPAGLSLR 338

Query: 407 GSLTSSAVIQPSHAQNLSNSINALGKFQSFVSPAQQNPNLFQEIPSSLELDQFQQSK--S 234
           G LTSS +IQ  HAQN SNS+N  GK Q  V P  Q+ +LFQ IP+SLELDQ QQ K  S
Sbjct: 339 G-LTSSGLIQTGHAQNSSNSVNTHGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCIS 397

Query: 233 TARVVDFNPADNHINFAVSNTFTDTRVRGGTLNNVLTAGQSNSLVLQGNTQRTQNGIGFI 54
           T R  +F+  DN   F  +N F D+R+   + +N L+   SN L+LQ N Q+T    G  
Sbjct: 398 TQR-GEFSSVDNTTVFTTANGFPDSRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLA 456

Query: 53  NQSSINMASFNSDSFNI 3
           NQSS+   + N + + +
Sbjct: 457 NQSSLKAVTLNPEPYTM 473



 Score =  174 bits (441), Expect(2) = 2e-89
 Identities = 96/147 (65%), Positives = 108/147 (73%), Gaps = 5/147 (3%)
 Frame = -1

Query: 1014 LRNIWQHVIRRKKVDFKLHDKS-NXXXXXXXXXXXXXGPALTGNADQNGKINRKRKXXXX 838
            L+NIWQHVIRRKK+D K  +KS +             GP  + NADQNGK+NRKRK    
Sbjct: 132  LKNIWQHVIRRKKIDSKDQNKSADQDNALHADGEGGEGPPSSSNADQNGKLNRKRKDQNE 191

Query: 837  XXXXXXXXXXD----PSTQKKPRVVWSIELHRKFVAAVNQLGLEKAVPKRILDLMNVEGL 670
                      +    PS+QKKPRVVWS+ELHRKFVAAVNQLG+EKAVPKRILDLMNVEGL
Sbjct: 192  DEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVEGL 251

Query: 669  TRENVASHLQKYRLYLKRINSVASQQA 589
            TRENVASHLQKYRLYLKRI+ VA+QQA
Sbjct: 252  TRENVASHLQKYRLYLKRISCVATQQA 278


>ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
           putative [Ricinus communis] gi|223537217|gb|EEF38849.1|
           two-component system sensor histidine kinase/response
           regulator, putative [Ricinus communis]
          Length = 676

 Score =  183 bits (464), Expect(2) = 7e-87
 Identities = 98/195 (50%), Positives = 137/195 (70%)
 Frame = -2

Query: 587 NTVAALGGKDASYMRMGTLDELGDFRTLAGSGRLSNTGLSSYSPSGMLGRLNRPVGVSLC 408
           N VAA G KD+SY+RM +LD  G+FRTL+G GRLS+T +SSY PSGMLGRLN P G++L 
Sbjct: 273 NMVAAFGIKDSSYLRMASLDGFGEFRTLSGPGRLSSTSISSYHPSGMLGRLNSPSGLTLR 332

Query: 407 GSLTSSAVIQPSHAQNLSNSINALGKFQSFVSPAQQNPNLFQEIPSSLELDQFQQSKSTA 228
           G + SS ++QP  +Q+LS+S+N LGK Q  +  + Q  NLFQ IPSSLE +Q  QSKS+A
Sbjct: 333 G-IASSGLLQPGQSQSLSSSVNTLGKLQPTLLHSSQGVNLFQGIPSSLEPNQL-QSKSSA 390

Query: 227 RVVDFNPADNHINFAVSNTFTDTRVRGGTLNNVLTAGQSNSLVLQGNTQRTQNGIGFINQ 48
              +FN  D+   F+++N+F+D RV  G+L+N  T   SN ++LQ + Q+ QN   F  Q
Sbjct: 391 HFGEFNRNDDSSGFSLTNSFSDARVTIGSLSNTATGPSSNPMMLQAHPQQNQNTGVFATQ 450

Query: 47  SSINMASFNSDSFNI 3
           SS+++ S N +SF++
Sbjct: 451 SSLSVPSLNQESFDV 465



 Score =  165 bits (417), Expect(2) = 7e-87
 Identities = 92/147 (62%), Positives = 104/147 (70%), Gaps = 5/147 (3%)
 Frame = -1

Query: 1014 LRNIWQHVIRRKKVDFKLHDKS-NXXXXXXXXXXXXXGPALTGNADQNGKINRKRKXXXX 838
            L+NIWQHVIRRKK+  K   +S N             G + +G+ DQNGK+NRKRK    
Sbjct: 126  LKNIWQHVIRRKKLQPKDQSRSQNQDKPLDGAGEGGQGMSSSGSEDQNGKVNRKRKDQDE 185

Query: 837  XXXXXXXXXXD----PSTQKKPRVVWSIELHRKFVAAVNQLGLEKAVPKRILDLMNVEGL 670
                      +    P  QKKPRVVWS+ELHRKFVAAVNQLGL+KAVPK+ILDLMNVEGL
Sbjct: 186  DEEEEGEDNLNDTDEPGAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGL 245

Query: 669  TRENVASHLQKYRLYLKRINSVASQQA 589
            TRENVASHLQKYRLYLKRI+S ASQQA
Sbjct: 246  TRENVASHLQKYRLYLKRISSTASQQA 272


>ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
            sativus] gi|449505373|ref|XP_004162449.1| PREDICTED:
            two-component response regulator ARR12-like [Cucumis
            sativus]
          Length = 697

 Score =  157 bits (398), Expect(2) = 1e-73
 Identities = 92/149 (61%), Positives = 102/149 (68%), Gaps = 7/149 (4%)
 Frame = -1

Query: 1014 LRNIWQHVIRRKKVDFKLHDK---SNXXXXXXXXXXXXXGPALTGNADQNGKINRKRKXX 844
            L+NIWQHVIRRKK++ K  +K    N              P  T NAD + K NRKRK  
Sbjct: 132  LKNIWQHVIRRKKLEPKAKNKFPSQNKVQNGGNEVEQGFSP--TSNAD-SAKFNRKRKDQ 188

Query: 843  XXXXXXXXXXXXD----PSTQKKPRVVWSIELHRKFVAAVNQLGLEKAVPKRILDLMNVE 676
                             PS QKKPRVVWS+ELHRKFV+AVNQLGLEKAVPK+ILDLMNVE
Sbjct: 189  DDDDDDEGKENGLDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPKKILDLMNVE 248

Query: 675  GLTRENVASHLQKYRLYLKRINSVASQQA 589
            GLTRENVASHLQKYRLYLKRI++VASQQA
Sbjct: 249  GLTRENVASHLQKYRLYLKRISNVASQQA 277



 Score =  146 bits (368), Expect(2) = 1e-73
 Identities = 91/197 (46%), Positives = 120/197 (60%), Gaps = 2/197 (1%)
 Frame = -2

Query: 587 NTVAALGGKDASYMRMGTLDELGDFRTLAGSGRLSNTGLSSYSPSGMLGRLNRPVGVSLC 408
           N VA  G KD +YMRMG+LD  GD    AGSGRL N+ LSSYSP GMLGRLN P G+SL 
Sbjct: 278 NMVATFGSKDGTYMRMGSLDGYGDLHGFAGSGRLPNSSLSSYSPVGMLGRLNSPAGMSLR 337

Query: 407 GSLTSSAVIQPSHAQNLSNSINALGKFQ--SFVSPAQQNPNLFQEIPSSLELDQFQQSKS 234
           G +TSS +IQ  ++QNL+ +IN LGK Q  + +SP  Q  NL Q IP+SLE+ Q Q SKS
Sbjct: 338 G-ITSSGLIQ-QNSQNLNCAINNLGKLQPTTMLSP-NQTTNLLQGIPTSLEIGQLQHSKS 394

Query: 233 TARVVDFNPADNHINFAVSNTFTDTRVRGGTLNNVLTAGQSNSLVLQGNTQRTQNGIGFI 54
           T  + DFN  ++   F V N+F +TR     + N   +     L+LQG          + 
Sbjct: 395 TTSIGDFNTMNDTSGFGVPNSFPETR---ANIGNSTYSVSPAPLMLQGTIPT------YG 445

Query: 53  NQSSINMASFNSDSFNI 3
           NQ+S+ +   N ++F+I
Sbjct: 446 NQTSLRVDPLNGETFDI 462


>ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
           gi|222866582|gb|EEF03713.1| type-b response regulator
           [Populus trichocarpa]
          Length = 707

 Score =  150 bits (379), Expect(2) = 2e-72
 Identities = 83/196 (42%), Positives = 122/196 (62%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 NTVAALGGKDASYMRMGTLDELGDFRTLAGSGRLSNTGLSSYSPSGMLGRLNRPVGVSLC 408
           N VAA G KD+SY+RMG+LD  GDFR++ G G+LS T LSSY P  +LGRLN P G++L 
Sbjct: 274 NMVAAFGAKDSSYLRMGSLDGFGDFRSVHGPGQLSTTSLSSYPPGSLLGRLNSPGGLTLQ 333

Query: 407 GSLTSSAVIQPSHAQNLSNSINALGKFQ-SFVSPAQQNPNLFQEIPSSLELDQFQQSKST 231
           G + S  ++QP H+++L+N +N LGK Q   +   + + NLFQ I S+L+  QF Q KS 
Sbjct: 334 G-IASPGLLQPGHSRSLNNPLNTLGKLQPGLLQTNRGSTNLFQGISSALDPKQF-QLKSM 391

Query: 230 ARVVDFNPADNHINFAVSNTFTDTRVRGGTLNNVLTAGQSNSLVLQGNTQRTQNGIGFIN 51
               DFN   +  +F ++  F D +V  G+L N +++  +N  +L  N Q+ Q       
Sbjct: 392 NHSGDFNHKGDATSFTLAGCFPDVKVTIGSLGNTISSAANNPQMLHVNPQQNQTRRSLAT 451

Query: 50  QSSINMASFNSDSFNI 3
           QSS++M S N +SF++
Sbjct: 452 QSSLSMPSLNQESFDV 467



 Score =  149 bits (377), Expect(2) = 2e-72
 Identities = 83/144 (57%), Positives = 98/144 (68%), Gaps = 3/144 (2%)
 Frame = -1

Query: 1014 LRNIWQHVIRRKKVDFKLHDKSNXXXXXXXXXXXXXGPALTGNADQNGKINRKRKXXXXX 835
            L+NIWQHVIRRKK   +  + S                  TG+ADQNGK+NRKRK     
Sbjct: 129  LKNIWQHVIRRKKWYPQDQNGSPDQDKGGDGAGEGEQVTSTGSADQNGKVNRKRKDQDEE 188

Query: 834  XXXXXXXXXD---PSTQKKPRVVWSIELHRKFVAAVNQLGLEKAVPKRILDLMNVEGLTR 664
                     D      QKKPRVVWS+ELH+KFV+AVNQLGL+KAVPK+ILDLMNV+GLTR
Sbjct: 189  EEGEGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKILDLMNVDGLTR 248

Query: 663  ENVASHLQKYRLYLKRINSVASQQ 592
            ENVASHLQK+RLYLKR++  A+QQ
Sbjct: 249  ENVASHLQKFRLYLKRLSCGANQQ 272


Top