BLASTX nr result

ID: Panax21_contig00026502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026502
         (1683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]              100   6e-31
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-24
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-18
ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    78   3e-18
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...    98   6e-18

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  100 bits (250), Expect(2) = 6e-31
 Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 19/334 (5%)
 Frame = -2

Query: 1340 HRGPIHRFILSISQVESYYEIDQLILFVLRNGVQEFSFHIWRDDLHKLHVSLFSYSQLTN 1161
            H+GPI +F+L + ++ESY +ID  I F+  + +QEF+    + + +KL    F++  L +
Sbjct: 117  HKGPIVKFVLEVDELESYSDIDHWINFLSNHDIQEFTLSRAKTEHYKLPSYFFTFLHLRH 176

Query: 1160 LDLRGCIFNPPSTFKGFGILICHPLCTC*SNLQV--------PPT*TSNI*KFCHY*LPR 1005
            L LRGC F PP  FKGF  LI   L     + +         P      +  +  Y    
Sbjct: 177  LKLRGCAFRPPPRFKGFSKLISLQLEDILMDAETFGSLISSCPLLEQLTVSGYIPYDSLE 236

Query: 1004 HSCS*TQFLCLNALFKSLWFVRAPLLTSLSI-MFRSEEGIKEARTSNMIELFNFPTCIEN 828
             S    +       F S+ F    LL  +++ + R  + +K  ++SN+I++      +E 
Sbjct: 237  ISAPNLKSFSFTGDFGSICFKNTLLLAEVTVALCRVNKNVKH-QSSNLIKIGRSLPAVEK 295

Query: 827  LHVDYYFMKDLCHLA*MTLKFSGYLSYVLMMLKRSRVCFF*SED-------ATTYEKLHL 669
            L+++ YF++ L        K    L   L +L    + F   ++        T+   L  
Sbjct: 296  LYLEGYFLEFLA--LGNVPKRLPILFNNLKVLHLDEMDFSNLDEILCSLCLITSSPNLEE 353

Query: 668  MRAFHHTG-IVSEHVEKFY--KNLGTCKSDTTFHQIQQVEMQLISGSWSELEFIKFLLAK 498
            +R   + G I  + V +++  +NL    S  +  ++Q+V+M+ IS    ELEFIKF+LA 
Sbjct: 354  LRVVAYAGDIARDAVVEYFGTQNL----SHHSLKRLQKVKMEEISNFEPELEFIKFILAS 409

Query: 497  SLMLEKLIIVPDFGTVSGGGLTLLKEVTRFRRAS 396
            S  LE++ ++    TV      + KE+ RFRRAS
Sbjct: 410  SPSLEEMEVLRSEDTVGEDERKMWKELMRFRRAS 443



 Score = 61.6 bits (148), Expect(2) = 6e-31
 Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = -3

Query: 1525 LIDNILMSLPR-DAARTSFLSTQWRFNWVKIPQLILDDRLCKGQLVNQNSAKTKLMMFIY 1349
            +I+NILM LP  DA  TS LS +WR+ W+ +P L++D+ L K  L  Q SAK +L+  +Y
Sbjct: 52   IIENILMRLPICDAVGTSILSKKWRYKWLTLPHLVIDNALGKKLLGRQQSAKNELVSAVY 111

Query: 1348 QVL 1340
            QVL
Sbjct: 112  QVL 114


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
            predicted protein [Populus trichocarpa]
          Length = 416

 Score = 90.5 bits (223), Expect(2) = 3e-24
 Identities = 90/344 (26%), Positives = 147/344 (42%), Gaps = 29/344 (8%)
 Frame = -2

Query: 1340 HRGPIHRFILSISQVESYYEIDQLILFVLRNGVQEFSFHIWRDDLHKLHVSLFSYSQLTN 1161
            H GPI++F LS   +    +ID+ IL + R   +EF   IW+   +KL   LFS+  LT+
Sbjct: 80   HNGPIYKFKLSHRDLLGVSDIDRWILHLSRGSTKEFVLEIWKGQRYKLPSCLFSFENLTH 139

Query: 1160 LDLRGCIFNPPSTFKGFGILICHPL----------------CTC*SNLQVPPT*TSNI*K 1029
            L+L  C+  PP  FKGF  L    L                C     L +      N   
Sbjct: 140  LELFNCLLKPPPAFKGFRNLKSLDLQHVTLAQEVFENLISSCALLERLTL-----MNFDG 194

Query: 1028 FCHY*LPRHSCS*TQFLCLNALFKSLWFVRAPLLTSLSI----MFRSEEGIKEARTSNMI 861
            F H    + +    QF  +  +F  + F    LLT +SI      +++  +    +S ++
Sbjct: 195  FTHL---KINAPNLQFFDIGGIFDDVSFHNTSLLTLVSIGLYANVKNDRHVSRGSSSKLL 251

Query: 860  ELFNFPTCIENLHVDYYFMKDLC--HLA*MTLKFSGYLSYVLMML-------KRSRVCFF 708
              F     +  L +  YF+K L    +     K    L+Y+ + +         + +C  
Sbjct: 252  RFFVNLPHLRRLEIQSYFIKYLAISKVPSRLPKPCMDLNYISIRINFNDFEENSAALCIL 311

Query: 707  *SEDATTYEKLHLMRAFHHTGIVSEHVEKFYKNLGTCKSDTTFHQIQQVEMQLISGSWSE 528
              +     +++ ++        V      +  +   C     F Q++ V++  ISG  SE
Sbjct: 312  --KSCPNLQEIEMLGRPEEQADVEPQTGFWGDDQWKC----LFGQLRLVKIVGISGIRSE 365

Query: 527  LEFIKFLLAKSLMLEKLIIVPDFGTVSGGGLTLLKEVTRFRRAS 396
            L+ IKFLL+ S +LE++ + P       GG  L+KE+ RFRRAS
Sbjct: 366  LDCIKFLLSNSPVLEQMTVKP---ASIEGGWELVKELLRFRRAS 406



 Score = 49.3 bits (116), Expect(2) = 3e-24
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = -3

Query: 1525 LIDNILMSLP-RDAARTSFLSTQWRFNWVKIPQLILDDRLCKGQLVNQNSAKTKLMMFIY 1349
            ++D IL  LP RDA RTS LS +WR+ W +IP L+ D +       +Q  AK  L+  I 
Sbjct: 15   VLDQILSVLPIRDAVRTSALSRKWRYQWSQIPHLVFDTQCASITSQDQTIAKNNLVNIID 74

Query: 1348 QVL 1340
             VL
Sbjct: 75   NVL 77


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 95/337 (28%), Positives = 149/337 (44%), Gaps = 22/337 (6%)
 Frame = -2

Query: 1340 HRGPIHRFILSISQVESYYEIDQLILFVLRNGVQEFSFHIWRDDLHKLHVSLFSYSQLTN 1161
            H+GPIH+F LS S ++   +IDQ ILF+ R+ ++E    +   +  ++   LF+  +LT 
Sbjct: 81   HQGPIHKFQLSTSYLQCCPDIDQWILFLSRSDIKELVLELGEGEWFRVPSCLFNCKKLTC 140

Query: 1160 LDLRGCIFNPPSTFKGFGILICHPLCTC*SNLQVP----------PT*TSNI*KFCHY*L 1011
            L+L  C F+PP TFKGF   +C    +    L  P          P   S    +     
Sbjct: 141  LELFRCEFDPPPTFKGF---LCLRSLSLHQVLVAPEAIESLISGCPLLESLALSYFDSLA 197

Query: 1010 PRHSCS*TQFLCLNALFKSLWFVRAPLLTSLSI-MFRSE---EGIKEARTSNMIELFNFP 843
                    ++LCL   F  +     PLL ++S+ M+ ++   E  +++   N I+     
Sbjct: 198  LNIRAPNLKYLCLEGEFTDICLENTPLLVAMSVAMYMNDEMAECFEQSSKCNFIKFLGGV 257

Query: 842  TCIENLHVDYYFMKDL--------CHLA*MTLKFSGYLSYVLMMLKRSRVCFF*SEDATT 687
              +E L    YF K L          +    LK           +K  RV      ++  
Sbjct: 258  PRLERLAGHIYFTKYLSIGDYPGSLAITYSHLKIIELYQVSFEDMKEIRVVLRLIMNSPN 317

Query: 686  YEKLHLMRAFHHTGIVSEHVEKFYKNLGTCKSDTTFHQIQQVEMQLISGSWSELEFIKFL 507
             ++L +  +   T + S            C  D TF Q++ V+M  +SG   E+EF+KFL
Sbjct: 318  LKELRISGS--STAVASVEAPNLEFWAKECPKDCTFKQLKVVKMTDMSGVPHEMEFMKFL 375

Query: 506  LAKSLMLEKLIIVPDFGTVSGGGLTLLKEVTRFRRAS 396
            LA S +LE + I P    V  G L +L ++ RFRRAS
Sbjct: 376  LANSPVLETMSITPCV-YVMDGRLNMLIQLVRFRRAS 411


>ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478059|gb|AES59262.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 528

 Score = 77.8 bits (190), Expect(2) = 3e-18
 Identities = 92/353 (26%), Positives = 151/353 (42%), Gaps = 38/353 (10%)
 Frame = -2

Query: 1340 HRGPIHRFILS-----ISQVESYYEIDQLILFVLRNGVQEFSFHIWRDDLHKLHVSLFSY 1176
            H GPI+ F  S     + +      ID+ IL ++   ++E    +W DD +KL   LFS 
Sbjct: 93   HSGPINMFKFSNVDDLMGEDSLVTNIDRWILHLIGRSIKELVLEVWIDDYYKLPWCLFSC 152

Query: 1175 SQLTNLDLRGCIFNPPSTFKGFGILICHPLCTC*SNLQVPPT*TSNI*KFC--------- 1023
              L +L L GC+  PP+ F+GF  L    LC     + +      N    C         
Sbjct: 153  QSLHSLKLNGCLLKPPTMFEGFRNLKSLDLCL----VNIVQDAFENFISRCPLLEKLRLR 208

Query: 1022 -HY*LPR---HSCS*TQFLCLNALFKSLWFVRAPLLTS------LSIMFRSEEGIKEART 873
              Y L +   H+ +  +F  +   F+ + F     LT+      L +   S +      +
Sbjct: 209  EFYGLTQINIHAPN-LKFFEIVGEFEVVTFGNTFQLTTIVIYSCLELTSNSNQSRSPGCS 267

Query: 872  SNMIELFNFPTCIENLHVDYYFMKDLC--------HLA*MTLKF-SGYLSYVLMMLKRSR 720
            SN+++ F+    I++L +D +F+K L             + L F S  +++  M    + 
Sbjct: 268  SNLLKFFDHRPHIQSLEIDGFFLKYLAAGVLPVKLPTPCINLSFLSLTINFDNMEEISAA 327

Query: 719  VCFF*SEDATTYEKLHLMRAFHHTGIVSEHVEKFYKNLGTCKSDTTFH-----QIQQVEM 555
            +C F S       K+  +RA  H   V      +      C  D +       +++ V +
Sbjct: 328  LCVFRSSPNLQKLKISALRA--HVATVPLTPATY------CWEDISSRLVMPFRVRHVTI 379

Query: 554  QLISGSWSELEFIKFLLAKSLMLEKLIIVPDFGTVSGGGLTLLKEVTRFRRAS 396
              ISG+ SEL  I+FLL  SL+LEK+I+ P    +      L+K + RF+RAS
Sbjct: 380  DGISGTQSELNLIRFLLLYSLVLEKMIVKPVANVIP----ELMKALIRFKRAS 428



 Score = 42.0 bits (97), Expect(2) = 3e-18
 Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 1525 LIDNILMSLP-RDAARTSFLSTQWRFNWVKIPQLILDDRL 1409
            +ID I+  LP RDA RTS LS  WR  W  +P L+ D +L
Sbjct: 24   VIDQIMSYLPIRDAVRTSVLSRNWRKKWYTLPNLVFDTKL 63


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 421

 Score = 98.2 bits (243), Expect = 6e-18
 Identities = 97/342 (28%), Positives = 153/342 (44%), Gaps = 27/342 (7%)
 Frame = -2

Query: 1340 HRGPIHRFILSISQVESYYEIDQLILFVLRNGVQEFSFHIWRDDLHKLHVSLFSYSQLTN 1161
            H GPIH+F LS S ++   +IDQ +LF+ R+ ++E    +   +  ++   LF+  +LT 
Sbjct: 81   HHGPIHKFQLSTSYLQCCPDIDQWLLFLSRSDIKELVLELGEGEWFRVPSCLFNCKKLTR 140

Query: 1160 LDLRGCIFNPPSTFKGFGILICHPLCTC*SNLQ---VPPT*TSNI*KFCHY*LPRHSCS- 993
            L+L  C F+PP  FKGF       LC    NL    V P    ++   C   L   S S 
Sbjct: 141  LELTRCEFDPPPNFKGF-------LCLKSLNLYQVLVAPEAIESLISGCPL-LESLSLSY 192

Query: 992  -----------*TQFLCLNALFKSLWFVRAPLLTSLSI-MFRSE---EGIKEARTSNMIE 858
                         ++LCL   FK +     PLL ++SI M+ +E   E  +++ + N I+
Sbjct: 193  FDSLVLNVRAPNLKYLCLEGEFKDICLENTPLLVAMSIAMYMTEDIAEHFEQSSSCNFIK 252

Query: 857  LFNFPTCIENLHVDYYFMKDLC--------HLA*MTLKFSGYLSYVLMMLKRSRVCFF*S 702
                   +E L    YF K L          +    LK           +K   V     
Sbjct: 253  FLGGVPRLERLIGHIYFTKYLSIGDYPGRHPITYSCLKVIELYQVSFEDMKEIHVVLRLI 312

Query: 701  EDATTYEKLHLMRAFHHTGIVSEHVEKFYKNLGTCKSDTTFHQIQQVEMQLISGSWSELE 522
             ++   ++L +  + +    V      F+  L  C  + TF ++  V++  +SG   E+E
Sbjct: 313  TNSPNLKELQISGSSNTLAAVEAPDLDFW--LKECPRNCTFEKLGVVKLTDMSGVPQEME 370

Query: 521  FIKFLLAKSLMLEKLIIVPDFGTVSGGGLTLLKEVTRFRRAS 396
            FIKFLLA S +LE + I P    V  G + +L E+ +FRR+S
Sbjct: 371  FIKFLLANSPVLEMMSITPCV-YVMDGRVNMLVELLKFRRSS 411



 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
 Frame = -3

Query: 1525 LIDNILMSLP-RDAARTSFLSTQWRFNWVKIPQLILDDRLCKGQLVNQNSAKTKLMMFIY 1349
            +I++IL  LP RDA +TS LST+WR+ W  +  L+ DD+ C     ++   +++L+ FI 
Sbjct: 17   IIESILTRLPIRDAVKTSILSTKWRYRWATLTHLVFDDK-CVAMYCDKGVLESRLVKFIS 75

Query: 1348 QVLTVGQ-----------------YIGSYCLFLK*KAIMRLIN*YCLY*EMGSRNSAFTF 1220
            + L +                    I  + LFL    I  L+       E+G        
Sbjct: 76   RALFLHHGPIHKFQLSTSYLQCCPDIDQWLLFLSRSDIKELVL------ELGE------- 122

Query: 1219 GGTISI-NCMFHCFHIHN*QIWTFEV-----VYLILRLHLKGLVSSSVIPCALASLIFRC 1058
            G    + +C+F+C  +   ++   E          L L    L    V P A+ SLI  C
Sbjct: 123  GEWFRVPSCLFNCKKLTRLELTRCEFDPPPNFKGFLCLKSLNLYQVLVAPEAIESLISGC 182

Query: 1057 PLLEQVTFESFAIIDYLDIVAPKLN-SCA*MPFSNLCGS*EPLFL 926
            PLLE ++   F  +  L++ AP L   C    F ++C    PL +
Sbjct: 183  PLLESLSLSYFDSL-VLNVRAPNLKYLCLEGEFKDICLENTPLLV 226


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