BLASTX nr result

ID: Panax21_contig00026493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026493
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262619.1| PREDICTED: ABC transporter G family member 1...   181   7e-44
emb|CAN69297.1| hypothetical protein VITISV_006943 [Vitis vinifera]   181   7e-44
ref|XP_002525670.1| ATP-binding cassette transporter, putative [...   179   3e-43
gb|AAP80385.1| ABC transporter [Gossypium hirsutum]                   175   7e-42
ref|XP_002331414.1| white-brown-complex ABC transporter family [...   169   4e-40

>ref|XP_002262619.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]
           gi|297737190|emb|CBI26391.3| unnamed protein product
           [Vitis vinifera]
          Length = 705

 Score =  181 bits (460), Expect = 7e-44
 Identities = 90/108 (83%), Positives = 97/108 (89%)
 Frame = -3

Query: 329 MSISTNDVMMEIEAHKPQGNGMVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 150
           M  S N+ MMEIEA KP   G V+GGLSPLSETLWKE+T+TEF+GDVSARL WKDLTVMV
Sbjct: 1   MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV 60

Query: 149 TLSNGETQNLLEGLTGYAEPGTFTALMGPSGSGKSTLLDSLSSRLAAN 6
           TLSNGETQ +LEGLTGYAEPGTFTALMGPSGSGKSTLLD+LSSRLAAN
Sbjct: 61  TLSNGETQKVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAAN 108


>emb|CAN69297.1| hypothetical protein VITISV_006943 [Vitis vinifera]
          Length = 716

 Score =  181 bits (460), Expect = 7e-44
 Identities = 90/108 (83%), Positives = 97/108 (89%)
 Frame = -3

Query: 329 MSISTNDVMMEIEAHKPQGNGMVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 150
           M  S N+ MMEIEA KP   G V+GGLSPLSETLWKE+T+TEF+GDVSARL WKDLTVMV
Sbjct: 1   MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV 60

Query: 149 TLSNGETQNLLEGLTGYAEPGTFTALMGPSGSGKSTLLDSLSSRLAAN 6
           TLSNGETQ +LEGLTGYAEPGTFTALMGPSGSGKSTLLD+LSSRLAAN
Sbjct: 61  TLSNGETQKVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAAN 108


>ref|XP_002525670.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223535106|gb|EEF36788.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 705

 Score =  179 bits (455), Expect = 3e-43
 Identities = 88/108 (81%), Positives = 96/108 (88%)
 Frame = -3

Query: 329 MSISTNDVMMEIEAHKPQGNGMVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 150
           M  + N  MMEIEA KP GNGM++  LSPLSETLW+EKTNTE +GDVSARL WKDLTVMV
Sbjct: 1   MRNAANHTMMEIEASKPAGNGMLVAALSPLSETLWREKTNTELVGDVSARLTWKDLTVMV 60

Query: 149 TLSNGETQNLLEGLTGYAEPGTFTALMGPSGSGKSTLLDSLSSRLAAN 6
           TLSNGETQN+LEGLTGYAEPG+ TALMGPSGSGKSTLLD+LSSRLAAN
Sbjct: 61  TLSNGETQNVLEGLTGYAEPGSLTALMGPSGSGKSTLLDALSSRLAAN 108


>gb|AAP80385.1| ABC transporter [Gossypium hirsutum]
          Length = 705

 Score =  175 bits (443), Expect = 7e-42
 Identities = 85/104 (81%), Positives = 95/104 (91%)
 Frame = -3

Query: 317 TNDVMMEIEAHKPQGNGMVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMVTLSN 138
           +N  MMEI+A+KP G GMV+GGLSPLSETLW+EKT+TE +GDVSARL W+DLTVMVTLSN
Sbjct: 6   SNTAMMEIQANKPAGTGMVVGGLSPLSETLWREKTDTELMGDVSARLTWEDLTVMVTLSN 65

Query: 137 GETQNLLEGLTGYAEPGTFTALMGPSGSGKSTLLDSLSSRLAAN 6
           G TQ +LEGLTGYAEPGT TALMGPSGSGKSTLLD+LSSRLAAN
Sbjct: 66  GATQKVLEGLTGYAEPGTLTALMGPSGSGKSTLLDALSSRLAAN 109


>ref|XP_002331414.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222873628|gb|EEF10759.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 698

 Score =  169 bits (428), Expect = 4e-40
 Identities = 86/117 (73%), Positives = 99/117 (84%), Gaps = 7/117 (5%)
 Frame = -3

Query: 335 LAMSISTNDVMMEIEAHKPQG-------NGMVIGGLSPLSETLWKEKTNTEFIGDVSARL 177
           +A + S N V+MEIEA  P G       +G V+GGLSPLSETLW+++T+TEF+GDVSARL
Sbjct: 1   MARNPSPNKVIMEIEASIPSGIVEGIAVDGTVVGGLSPLSETLWRDRTSTEFVGDVSARL 60

Query: 176 AWKDLTVMVTLSNGETQNLLEGLTGYAEPGTFTALMGPSGSGKSTLLDSLSSRLAAN 6
            WKDLTVMVTL +GETQN+LEGLTGYAEPGT TALMGPSGSGKSTLLD+LSSRLAAN
Sbjct: 61  TWKDLTVMVTLGSGETQNVLEGLTGYAEPGTLTALMGPSGSGKSTLLDALSSRLAAN 117


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