BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026466
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002516391.1| ribosomal large subunit pseudouridine syntha...    63   2e-08
ref|NP_181447.2| suppressor of variegation1 causing pseudouridin...    63   3e-08
gb|AAC28992.1| unknown protein [Arabidopsis thaliana]                  63   3e-08
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...    62   4e-08

>ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|222851815|gb|EEE89362.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/68 (54%), Positives = 41/68 (60%)
 Frame = -3

Query: 204 EFNITFAPPKPKPSKTLIPLXXXXXXXXXXXXXXEFAQQLFIPWIVRDENGNLTLQSTPP 25
           EFNITFAPPKPKP    +P                   QLFIPWIVR E+GNL LQS PP
Sbjct: 39  EFNITFAPPKPKPK---LPANLQTDAASLSLPPG----QLFIPWIVRGEDGNLKLQSNPP 91

Query: 24  ARLLPAMA 1
           ARL+ A+A
Sbjct: 92  ARLIHAIA 99


>ref|XP_002516391.1| ribosomal large subunit pseudouridine synthase B, putative [Ricinus
           communis] gi|223544489|gb|EEF46008.1| ribosomal large
           subunit pseudouridine synthase B, putative [Ricinus
           communis]
          Length = 315

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/69 (53%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 EFNITFAPPKPKP-SKTLIPLXXXXXXXXXXXXXXEFAQQLFIPWIVRDENGNLTLQSTP 28
           EFNI+FAPPKPKP S   + L                  QLFIPWIVR E+GNL LQS P
Sbjct: 49  EFNISFAPPKPKPKSPPQLDLSDQEG-------------QLFIPWIVRGEDGNLKLQSHP 95

Query: 27  PARLLPAMA 1
           PARL+ A+A
Sbjct: 96  PARLIHALA 104


>ref|NP_181447.2| suppressor of variegation1 causing pseudouridine synthase-like
           protein [Arabidopsis thaliana]
           gi|21617894|gb|AAM66944.1| unknown [Arabidopsis
           thaliana] gi|26450440|dbj|BAC42334.1| unknown protein
           [Arabidopsis thaliana] gi|330254545|gb|AEC09639.1|
           suppressor of variegation1 causing pseudouridine
           synthase-like protein [Arabidopsis thaliana]
          Length = 410

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/68 (50%), Positives = 40/68 (58%)
 Frame = -3

Query: 204 EFNITFAPPKPKPSKTLIPLXXXXXXXXXXXXXXEFAQQLFIPWIVRDENGNLTLQSTPP 25
           EF+I+FAPPKPKPS T                     QQLFIPWIVR ++G L LQS PP
Sbjct: 47  EFDISFAPPKPKPSST---------------HGGVTPQQLFIPWIVRSDDGTLKLQSQPP 91

Query: 24  ARLLPAMA 1
           ARL+  +A
Sbjct: 92  ARLIHNLA 99


>gb|AAC28992.1| unknown protein [Arabidopsis thaliana]
          Length = 303

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/68 (50%), Positives = 40/68 (58%)
 Frame = -3

Query: 204 EFNITFAPPKPKPSKTLIPLXXXXXXXXXXXXXXEFAQQLFIPWIVRDENGNLTLQSTPP 25
           EF+I+FAPPKPKPS T                     QQLFIPWIVR ++G L LQS PP
Sbjct: 47  EFDISFAPPKPKPSST---------------HGGVTPQQLFIPWIVRSDDGTLKLQSQPP 91

Query: 24  ARLLPAMA 1
           ARL+  +A
Sbjct: 92  ARLIHNLA 99


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 412

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/68 (50%), Positives = 40/68 (58%)
 Frame = -3

Query: 204 EFNITFAPPKPKPSKTLIPLXXXXXXXXXXXXXXEFAQQLFIPWIVRDENGNLTLQSTPP 25
           EF+I+FAPPKPKPS T                     QQLFIPWIVR ++G L LQS PP
Sbjct: 48  EFDISFAPPKPKPSST---------------RGGATPQQLFIPWIVRGDDGTLKLQSQPP 92

Query: 24  ARLLPAMA 1
           ARL+  +A
Sbjct: 93  ARLIHNLA 100