BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026448
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554366.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    66   3e-09
ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycin...    64   1e-08
ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I sub...    63   2e-08
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ...    63   3e-08
ref|XP_002318989.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_003554366.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA12-like [Glycine max]
          Length = 116

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = -3

Query: 458 DIRRELGISLLDDTXXXXXXKAIDYNARCKNCPKVG---LQYEARQMRSADEGQTIFYTC 288
           DIR+ELG+ ++++         ++Y+  CK C K G     Y  RQMRSADEGQT FYTC
Sbjct: 53  DIRKELGMEIIEE------HTVMEYSXVCKKCGKCGHGEATYYTRQMRSADEGQTTFYTC 106

Query: 287 SECGHTRTEN 258
           + CGH   EN
Sbjct: 107 TGCGHQSQEN 116


>ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine max]
           gi|255632466|gb|ACU16583.1| unknown [Glycine max]
          Length = 116

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = -3

Query: 458 DIRRELGISLLDDTXXXXXXKAIDYNARCKNCPKVG---LQYEARQMRSADEGQTIFYTC 288
           DIRRELG+ ++++         ++Y+   K C K G     Y  RQMRSADEGQT FYTC
Sbjct: 53  DIRRELGMEIIEE------HAVMEYSKVSKKCEKCGHGEATYYTRQMRSADEGQTTFYTC 106

Query: 287 SECGHTRTEN 258
           + CGH   EN
Sbjct: 107 TGCGHQSQEN 116


>ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449450516|ref|XP_004143008.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449450518|ref|XP_004143009.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus] gi|449500372|ref|XP_004161079.1| PREDICTED:
           DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449500375|ref|XP_004161080.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449500379|ref|XP_004161081.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus]
          Length = 116

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -3

Query: 458 DIRRELGISLLDDTXXXXXXKAIDYNARCKNCPKVGLQYEARQMRSADEGQTIFYTCSEC 279
           +IR++LGISL+D+       +      RC+ C      +E+RQMRSADEGQT FYTC++C
Sbjct: 54  EIRKQLGISLIDEEKMQLAKE----RRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKC 109

Query: 278 GHTRTEN 258
            H   EN
Sbjct: 110 HHQTREN 116


>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
           gi|357470681|ref|XP_003605625.1| DNA-directed RNA
           polymerase I subunit RPA12 [Medicago truncatula]
           gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
           gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
          Length = 115

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/67 (47%), Positives = 38/67 (56%)
 Frame = -3

Query: 458 DIRRELGISLLDDTXXXXXXKAIDYNARCKNCPKVGLQYEARQMRSADEGQTIFYTCSEC 279
           DIRRELGI L+++            N  C+ C      +  RQMRSADEGQT FYTC+ C
Sbjct: 53  DIRRELGIDLIEEQKVQLSKV----NKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRC 108

Query: 278 GHTRTEN 258
           GH   EN
Sbjct: 109 GHQFQEN 115


>ref|XP_002318989.1| predicted protein [Populus trichocarpa] gi|222857365|gb|EEE94912.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/67 (43%), Positives = 41/67 (61%)
 Frame = -3

Query: 458 DIRRELGISLLDDTXXXXXXKAIDYNARCKNCPKVGLQYEARQMRSADEGQTIFYTCSEC 279
           D+RR+LGIS  +          ++ N +C+ C    L++  RQMRSADEGQT F+ C+ C
Sbjct: 54  DMRRDLGISHFEGKMEVKD---MEINKKCEKCGHTKLKFSTRQMRSADEGQTTFFHCANC 110

Query: 278 GHTRTEN 258
            +T TEN
Sbjct: 111 SYTFTEN 117