BLASTX nr result

ID: Panax21_contig00026412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026412
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation...   167   3e-39
ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation...   162   6e-38
ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|2...   162   8e-38
gb|ABK92468.1| unknown [Populus trichocarpa]                          162   8e-38
ref|XP_003552657.1| PREDICTED: eukaryotic translation initiation...   157   3e-36

>ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H
           [Vitis vinifera] gi|296089621|emb|CBI39440.3| unnamed
           protein product [Vitis vinifera]
          Length = 337

 Score =  167 bits (422), Expect = 3e-39
 Identities = 81/103 (78%), Positives = 86/103 (83%)
 Frame = -3

Query: 715 TELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQKFQFYYRNLSXXXXXX 536
           TELEADTPVTQCDYDRLQLSTNP+MERN+EFLIECMDDLSMEQQKFQFYYRNLS      
Sbjct: 201 TELEADTPVTQCDYDRLQLSTNPYMERNLEFLIECMDDLSMEQQKFQFYYRNLSRQQGQQ 260

Query: 535 XXXXXXXXAENMARKAAGEEALPEEDPSNPVFKPIPEPPRLDS 407
                   AENMARK AGE+ LPEEDP+NP+FKPIPEP RLDS
Sbjct: 261 QAWLQKRRAENMARKTAGEDPLPEEDPANPIFKPIPEPSRLDS 303


>ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           H-like [Cucumis sativus]
           gi|449521699|ref|XP_004167867.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit H-like [Cucumis
           sativus]
          Length = 337

 Score =  162 bits (410), Expect = 6e-38
 Identities = 78/103 (75%), Positives = 86/103 (83%)
 Frame = -3

Query: 715 TELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQKFQFYYRNLSXXXXXX 536
           TELE+D+PVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS+EQQKFQFYYR+L+      
Sbjct: 201 TELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQ 260

Query: 535 XXXXXXXXAENMARKAAGEEALPEEDPSNPVFKPIPEPPRLDS 407
                   AENM RKAAGEE LPEEDP+NP+FKP+PEP RLDS
Sbjct: 261 QSWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSRLDS 303


>ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|222861210|gb|EEE98752.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  162 bits (409), Expect = 8e-38
 Identities = 78/103 (75%), Positives = 85/103 (82%)
 Frame = -3

Query: 715 TELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQKFQFYYRNLSXXXXXX 536
           TELE DTPVTQCDYDRLQLST+P++ERNVEFLIECMDDLSMEQQKFQ+YYRNLS      
Sbjct: 197 TELEDDTPVTQCDYDRLQLSTSPYLERNVEFLIECMDDLSMEQQKFQYYYRNLSRQQAQQ 256

Query: 535 XXXXXXXXAENMARKAAGEEALPEEDPSNPVFKPIPEPPRLDS 407
                   +ENM+RKAAGEE LPEEDP NP+FKPIPEP RLDS
Sbjct: 257 QAWLQKRRSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRLDS 299


>gb|ABK92468.1| unknown [Populus trichocarpa]
          Length = 341

 Score =  162 bits (409), Expect = 8e-38
 Identities = 78/103 (75%), Positives = 85/103 (82%)
 Frame = -3

Query: 715 TELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQKFQFYYRNLSXXXXXX 536
           TELE DTPVTQCDYDRLQLST+P++ERNVEFLIECMDDLSMEQQKFQ+YYRNLS      
Sbjct: 205 TELEDDTPVTQCDYDRLQLSTSPYLERNVEFLIECMDDLSMEQQKFQYYYRNLSRQQAQQ 264

Query: 535 XXXXXXXXAENMARKAAGEEALPEEDPSNPVFKPIPEPPRLDS 407
                   +ENM+RKAAGEE LPEEDP NP+FKPIPEP RLDS
Sbjct: 265 QAWLQKRRSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRLDS 307


>ref|XP_003552657.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           H-like [Glycine max]
          Length = 337

 Score =  157 bits (396), Expect = 3e-36
 Identities = 76/103 (73%), Positives = 82/103 (79%)
 Frame = -3

Query: 715 TELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQKFQFYYRNLSXXXXXX 536
           TELE DTPVTQCDYDRLQLST+  MERN EFLIECMDDLS+EQQKFQFYYR+LS      
Sbjct: 201 TELEPDTPVTQCDYDRLQLSTSSLMERNTEFLIECMDDLSLEQQKFQFYYRSLSRQQAQQ 260

Query: 535 XXXXXXXXAENMARKAAGEEALPEEDPSNPVFKPIPEPPRLDS 407
                    ENMARKAAGEE LPEEDPSNP+FKP+PEP RL+S
Sbjct: 261 QAWLQKRRTENMARKAAGEEPLPEEDPSNPIFKPLPEPSRLES 303