BLASTX nr result

ID: Panax21_contig00026393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026393
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40419.3| unnamed protein product [Vitis vinifera]              202   6e-50
emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]   202   6e-50
ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|2...   192   6e-47
ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like...   179   5e-43
ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like...   176   3e-42

>emb|CBI40419.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  202 bits (514), Expect = 6e-50
 Identities = 107/177 (60%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = -3

Query: 655 PPPNYLSNVGLGYAIAIAXXXXXXXXXXXLASYICCRLTRRRQXXXXXXXXXXXXXXNGI 476
           PPP YLSN+GLGYAIAIA           LASY+CCR  R                 +GI
Sbjct: 80  PPPTYLSNLGLGYAIAIAFAFLVLLSTVLLASYLCCR-RRPLSPHHSRNPASAANSSDGI 138

Query: 475 ILPRIVFVAEDDEDDSQNVVVGLDQAVINTYPKFPFSKGVRN-DSMCAICLCDYKDAEML 299
           +LPRI+FVAED ED+ QNVVVGLDQAVI++YPKFPFSK   + DS+C+ICLC+YKD+EML
Sbjct: 139 VLPRIIFVAED-EDEDQNVVVGLDQAVIDSYPKFPFSKSNTHLDSVCSICLCEYKDSEML 197

Query: 298 RTLPDCRHYFHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXSEVVPLSQYSDGRNRR 128
           R LPDCRH FHL C+DAWLKLNASCPVCRN           SE+VPLSQY   R RR
Sbjct: 198 RMLPDCRHCFHLYCVDAWLKLNASCPVCRNSPLPTPLSTPLSELVPLSQYPADRRRR 254


>emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
          Length = 641

 Score =  202 bits (514), Expect = 6e-50
 Identities = 107/177 (60%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = -3

Query: 655 PPPNYLSNVGLGYAIAIAXXXXXXXXXXXLASYICCRLTRRRQXXXXXXXXXXXXXXNGI 476
           PPP YLSN+GLGYAIAIA           LASY+CCR  R                 +GI
Sbjct: 23  PPPTYLSNLGLGYAIAIAFAFLVLLSTVLLASYLCCR-RRPLSPHHSRNPASAANSSDGI 81

Query: 475 ILPRIVFVAEDDEDDSQNVVVGLDQAVINTYPKFPFSKGVRN-DSMCAICLCDYKDAEML 299
           +LPRI+FVAED ED+ QNVVVGLDQAVI++YPKFPFSK   + DS+C+ICLC+YKD+EML
Sbjct: 82  VLPRIIFVAED-EDEDQNVVVGLDQAVIDSYPKFPFSKSNTHLDSVCSICLCEYKDSEML 140

Query: 298 RTLPDCRHYFHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXSEVVPLSQYSDGRNRR 128
           R LPDCRH FHL C+DAWLKLNASCPVCRN           SE+VPLSQY   R RR
Sbjct: 141 RMLPDCRHCFHLYCVDAWLKLNASCPVCRNSPLPTPLSTPLSELVPLSQYPADRRRR 197


>ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|222860935|gb|EEE98477.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  192 bits (488), Expect = 6e-47
 Identities = 104/189 (55%), Positives = 122/189 (64%), Gaps = 11/189 (5%)
 Frame = -3

Query: 661 PNPPPNYLSNVGLGYAIAIAXXXXXXXXXXXLASYICCRLTRRR-QXXXXXXXXXXXXXX 485
           P PP NYL+N+GLGY+IAIA           LASYICCR  R R +              
Sbjct: 17  PPPPANYLTNLGLGYSIAIALFFLVLLSTILLASYICCRTNRHRSRNSNNNNNNYANSTA 76

Query: 484 NGIILPRIVFVAEDDED---DSQNVVVGLDQAVINTYPKFPFSK----GVRNDSMC---A 335
           +GIILPRI+FVAEDDE+   D ++  VGL+QAVIN+YPKF FSK      R ++ C   +
Sbjct: 77  DGIILPRIIFVAEDDEEQERDLESAAVGLNQAVINSYPKFQFSKDGGFSERTNNFCNTCS 136

Query: 334 ICLCDYKDAEMLRTLPDCRHYFHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXSEVVPLS 155
           ICLC+YKD EMLR +PDCRHYFHL C+DAWLKLN SCPVCRN           SEVVPLS
Sbjct: 137 ICLCEYKDLEMLRMMPDCRHYFHLLCLDAWLKLNGSCPVCRNSPLPTPLSTPLSEVVPLS 196

Query: 154 QYSDGRNRR 128
           QY+  R RR
Sbjct: 197 QYAADRRRR 205


>ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus]
           gi|449480258|ref|XP_004155843.1| PREDICTED: RING-H2
           finger protein ATL67-like [Cucumis sativus]
          Length = 184

 Score =  179 bits (454), Expect = 5e-43
 Identities = 97/184 (52%), Positives = 113/184 (61%), Gaps = 7/184 (3%)
 Frame = -3

Query: 658 NPPPNY-LSNVGLGYAIAIAXXXXXXXXXXXLASYICCRLTRRRQXXXXXXXXXXXXXXN 482
           +P   Y  S +GLGY+IAIA           LA Y+CCR +R R                
Sbjct: 3   SPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDA-- 60

Query: 481 GIILPRIVFVAEDD---EDDSQNVVVGLDQAVINTYPKFPFSKG---VRNDSMCAICLCD 320
           GIILP+I+FVAEDD   + D  N VVGLDQ VIN+YPKFPFS+       + +C+ICLC+
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLCE 120

Query: 319 YKDAEMLRTLPDCRHYFHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXSEVVPLSQYSDG 140
           YKDAEMLR +P+CRHYFHL CIDAWLKLN SCPVCRN            EVVPLSQY   
Sbjct: 121 YKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMAD 180

Query: 139 RNRR 128
           R RR
Sbjct: 181 RRRR 184


>ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 179

 Score =  176 bits (447), Expect = 3e-42
 Identities = 90/179 (50%), Positives = 118/179 (65%), Gaps = 5/179 (2%)
 Frame = -3

Query: 646 NYLSNVGLGYAIAIAXXXXXXXXXXXLASYICCRLTRRRQXXXXXXXXXXXXXXNGIILP 467
           ++  ++GLGY+IAIA           L+SY+CCR  RRR                GI+LP
Sbjct: 4   DHFPHLGLGYSIAIALAFLFLLSTLLLSSYLCCRHNRRRHTQTTASAAASDG---GIVLP 60

Query: 466 RIVFVAEDDEDDSQN-VVVGLDQAVINTYPKFPFSKG--VRN--DSMCAICLCDYKDAEM 302
           R++FVAEDD++D+   +VVGLDQ+VIN+YP+F F+K    RN  ++ C+ICLC+YKD+EM
Sbjct: 61  RVIFVAEDDDEDADACMVVGLDQSVINSYPRFQFNKDSDARNIINTTCSICLCEYKDSEM 120

Query: 301 LRTLPDCRHYFHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXSEVVPLSQYSDGRNRRR 125
           LR +P+CRHYFHL C+D+WLKLN SCPVCRN            EVVPLSQY+  R R R
Sbjct: 121 LRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRRNR 179


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