BLASTX nr result

ID: Panax21_contig00026392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026392
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522336.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_002270797.1| PREDICTED: reticulon-like protein B13 [Vitis...    93   2e-17
ref|NP_565555.1| reticulon-like protein B13 [Arabidopsis thalian...    91   1e-16
ref|XP_002310752.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002878692.1| reticulon family protein [Arabidopsis lyrata...    89   5e-16

>ref|XP_002522336.1| conserved hypothetical protein [Ricinus communis]
           gi|223538414|gb|EEF40020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = -3

Query: 507 PSVSGVKISEETVMEMANSIREWCEEGVRWMFRVGAEKEWFVFAKTIAALWLLSVVGTFS 328
           P +S  KISEET  E A S+R   EEG+RWMF V AE EWF+FA+ +  LWLLS VG+F 
Sbjct: 78  PKISNWKISEETTTETAKSVRGMIEEGIRWMFHVSAESEWFIFARVVTVLWLLSYVGSFF 137

Query: 327 GLITFLYIGTVLGMTVPV 274
             +T LY+GTV+GM+VPV
Sbjct: 138 DFLTLLYVGTVMGMSVPV 155


>ref|XP_002270797.1| PREDICTED: reticulon-like protein B13 [Vitis vinifera]
           gi|297735839|emb|CBI18559.3| unnamed protein product
           [Vitis vinifera]
          Length = 214

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/78 (52%), Positives = 57/78 (73%)
 Frame = -3

Query: 507 PSVSGVKISEETVMEMANSIREWCEEGVRWMFRVGAEKEWFVFAKTIAALWLLSVVGTFS 328
           PS+SG++I+E++  EM    RE  EE VRWMFRVGAE EW+VFA  +  LW+LS+VG+  
Sbjct: 78  PSLSGLEITEQSTTEMTILFRESIEEAVRWMFRVGAESEWYVFAGVVTGLWILSIVGSCM 137

Query: 327 GLITFLYIGTVLGMTVPV 274
            L+T  YIG ++ +T+PV
Sbjct: 138 DLLTLAYIGIMMSVTIPV 155


>ref|NP_565555.1| reticulon-like protein B13 [Arabidopsis thaliana]
           gi|75099222|sp|O64837.1|RTNLM_ARATH RecName:
           Full=Reticulon-like protein B13; Short=AtRTNLB13
           gi|3152617|gb|AAC17096.1| putative seed maturation
           protein [Arabidopsis thaliana]
           gi|20197004|gb|AAM14868.1| putative seed maturation
           protein [Arabidopsis thaliana]
           gi|330252381|gb|AEC07475.1| reticulon-like protein B13
           [Arabidopsis thaliana]
          Length = 206

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/77 (54%), Positives = 54/77 (70%)
 Frame = -3

Query: 507 PSVSGVKISEETVMEMANSIREWCEEGVRWMFRVGAEKEWFVFAKTIAALWLLSVVGTFS 328
           P +SG+++SEE V+E   S R   EE VRWMFRVGAE EWFVFA+T+   W+LS +G   
Sbjct: 79  PELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLL 138

Query: 327 GLITFLYIGTVLGMTVP 277
              T L+IG V+G+TVP
Sbjct: 139 DFHTCLFIGLVMGLTVP 155


>ref|XP_002310752.1| predicted protein [Populus trichocarpa] gi|222853655|gb|EEE91202.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/78 (56%), Positives = 59/78 (75%)
 Frame = -3

Query: 507 PSVSGVKISEETVMEMANSIREWCEEGVRWMFRVGAEKEWFVFAKTIAALWLLSVVGTFS 328
           P +SG++ISE+T +E A S+R+  EEGVRWM  V AE+E F+FA+ +AAL LLS VG+F 
Sbjct: 78  PDLSGLEISEQTAIEAARSVRQSIEEGVRWMCHVSAERELFLFARVVAALCLLSYVGSFW 137

Query: 327 GLITFLYIGTVLGMTVPV 274
             ++ LYI  V+GMTVPV
Sbjct: 138 DSLSLLYIDIVVGMTVPV 155


>ref|XP_002878692.1| reticulon family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324531|gb|EFH54951.1| reticulon family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/77 (53%), Positives = 53/77 (68%)
 Frame = -3

Query: 507 PSVSGVKISEETVMEMANSIREWCEEGVRWMFRVGAEKEWFVFAKTIAALWLLSVVGTFS 328
           P +SG+++SEE V+E   S R   EE VRWMFRVGAE EWFV A+T+   W+LS +G   
Sbjct: 79  PELSGLEVSEEFVVETVRSCRMLMEETVRWMFRVGAESEWFVLARTVLGFWVLSRIGNLL 138

Query: 327 GLITFLYIGTVLGMTVP 277
              T L+IG V+G+TVP
Sbjct: 139 DFHTCLFIGLVMGLTVP 155


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