BLASTX nr result

ID: Panax21_contig00026352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026352
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519046.1| conserved hypothetical protein [Ricinus comm...   174   4e-48
ref|XP_003637395.1| hypothetical protein MTR_084s0018 [Medicago ...   170   8e-45
ref|XP_002305143.1| predicted protein [Populus trichocarpa] gi|2...   166   3e-43
ref|NP_193903.1| uncharacterized protein [Arabidopsis thaliana] ...   159   6e-43
ref|NP_001238012.1| uncharacterized protein LOC100500177 [Glycin...   163   6e-43

>ref|XP_002519046.1| conserved hypothetical protein [Ricinus communis]
           gi|223541709|gb|EEF43257.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score =  174 bits (441), Expect(2) = 4e-48
 Identities = 72/86 (83%), Positives = 78/86 (90%)
 Frame = +3

Query: 81  MIPQDWAPPCGNECTKKFAALTQIPWRVFCKKGCAADGDTWEECLGECNEICYKDPVLKD 260
           M+P  W PPCG++CT K+AALTQIPWRVFCKKGC ADG+TWEECL ECNEICYKDPV KD
Sbjct: 1   MLPHQWTPPCGSQCTHKYAALTQIPWRVFCKKGCDADGETWEECLSECNEICYKDPVFKD 60

Query: 261 QQWSAYIDRSPGAASYSQECFHACVA 338
           QQWSAYIDRSPGAA YS+ECFHACVA
Sbjct: 61  QQWSAYIDRSPGAARYSEECFHACVA 86



 Score = 43.5 bits (101), Expect(2) = 4e-48
 Identities = 15/25 (60%), Positives = 22/25 (88%)
 Frame = +2

Query: 323 SCLCGCGYKFDIPSEKVNQVHPNRP 397
           +C+ GCGY+F+I +EKV+Q+ PNRP
Sbjct: 83  ACVAGCGYRFEIEAEKVDQIRPNRP 107


>ref|XP_003637395.1| hypothetical protein MTR_084s0018 [Medicago truncatula]
           gi|355503330|gb|AES84533.1| hypothetical protein
           MTR_084s0018 [Medicago truncatula]
          Length = 188

 Score =  170 bits (430), Expect(2) = 8e-45
 Identities = 68/86 (79%), Positives = 81/86 (94%)
 Frame = +3

Query: 81  MIPQDWAPPCGNECTKKFAALTQIPWRVFCKKGCAADGDTWEECLGECNEICYKDPVLKD 260
           MIPQ WA PCGN+CT K+AALT++PWRVFCKKGC +DG+TWEECL +CN++CYKDPVLKD
Sbjct: 45  MIPQQWASPCGNKCTNKYAALTKLPWRVFCKKGCNSDGETWEECLEDCNQLCYKDPVLKD 104

Query: 261 QQWSAYIDRSPGAASYSQECFHACVA 338
           QQWSAYIDRSPG+A+YS+ECFHACV+
Sbjct: 105 QQWSAYIDRSPGSATYSEECFHACVS 130



 Score = 36.6 bits (83), Expect(2) = 8e-45
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +2

Query: 323 SCLCGCGYKFDIPSEKVNQVHPNRP 397
           +C+ GCGYKF++  ++ ++V PNRP
Sbjct: 127 ACVSGCGYKFEVKPDEADKVCPNRP 151


>ref|XP_002305143.1| predicted protein [Populus trichocarpa] gi|222848107|gb|EEE85654.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  166 bits (420), Expect(2) = 3e-43
 Identities = 67/86 (77%), Positives = 78/86 (90%)
 Frame = +3

Query: 81  MIPQDWAPPCGNECTKKFAALTQIPWRVFCKKGCAADGDTWEECLGECNEICYKDPVLKD 260
           M+P+ W  PCGN+CT+KF+ALTQIPWRVFCKKGC  DG+TWE+CL ECNEICYKDPVLKD
Sbjct: 1   MLPEQWTQPCGNQCTQKFSALTQIPWRVFCKKGCGTDGETWEDCLDECNEICYKDPVLKD 60

Query: 261 QQWSAYIDRSPGAASYSQECFHACVA 338
           +QW+AYIDRSPG+ASYS+ECF AC A
Sbjct: 61  RQWTAYIDRSPGSASYSEECFKACKA 86



 Score = 35.4 bits (80), Expect(2) = 3e-43
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 323 SCLCGCGYKFDIPSEKVNQVHPNRP 397
           +C  GCGYKF+I   +V++  PNRP
Sbjct: 83  ACKAGCGYKFEIHPGEVDKARPNRP 107


>ref|NP_193903.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4455280|emb|CAB36816.1| putative protein [Arabidopsis
           thaliana] gi|7268969|emb|CAB81279.1| putative protein
           [Arabidopsis thaliana] gi|37202020|gb|AAQ89625.1|
           At4g21720 [Arabidopsis thaliana]
           gi|51968588|dbj|BAD42986.1| putative protein
           [Arabidopsis thaliana] gi|332659094|gb|AEE84494.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 139

 Score =  159 bits (403), Expect(2) = 6e-43
 Identities = 63/86 (73%), Positives = 76/86 (88%)
 Frame = +3

Query: 81  MIPQDWAPPCGNECTKKFAALTQIPWRVFCKKGCAADGDTWEECLGECNEICYKDPVLKD 260
           MIPQ W PPCG++CT K++A TQ+PWRVFCKKGC AD D+WE+C+G+C+EICYKDPVLKD
Sbjct: 1   MIPQQWTPPCGSKCTNKYSAFTQLPWRVFCKKGCDADSDSWEDCVGDCSEICYKDPVLKD 60

Query: 261 QQWSAYIDRSPGAASYSQECFHACVA 338
           + W+A IDRSPG A YS+ECFHACVA
Sbjct: 61  RPWTAVIDRSPGDAKYSEECFHACVA 86



 Score = 40.8 bits (94), Expect(2) = 6e-43
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +2

Query: 323 SCLCGCGYKFDIPSEKVNQVHPNRP 397
           +C+ GCGYKFD+ +E VN+V P RP
Sbjct: 83  ACVAGCGYKFDVEAEIVNKVKPKRP 107


>ref|NP_001238012.1| uncharacterized protein LOC100500177 [Glycine max]
           gi|255629573|gb|ACU15134.1| unknown [Glycine max]
          Length = 137

 Score =  163 bits (413), Expect(2) = 6e-43
 Identities = 66/86 (76%), Positives = 78/86 (90%)
 Frame = +3

Query: 81  MIPQDWAPPCGNECTKKFAALTQIPWRVFCKKGCAADGDTWEECLGECNEICYKDPVLKD 260
           M+ Q W  PCG++CT K+AAL +IPWR+FCKKGC +DG+TWEECL +CN+ICYKDPVLKD
Sbjct: 1   MMSQQWGSPCGSQCTNKYAALGKIPWRIFCKKGCDSDGETWEECLEDCNQICYKDPVLKD 60

Query: 261 QQWSAYIDRSPGAASYSQECFHACVA 338
           QQWSAYIDRSPGAASYS+ECFHACV+
Sbjct: 61  QQWSAYIDRSPGAASYSEECFHACVS 86



 Score = 37.0 bits (84), Expect(2) = 6e-43
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +2

Query: 323 SCLCGCGYKFDIPSEKVNQVHPNR 394
           +C+ GCGYKF++ SE+ ++V PNR
Sbjct: 83  ACVSGCGYKFEVKSEEADKVCPNR 106


Top