BLASTX nr result
ID: Panax21_contig00026348
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00026348 (642 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31649.3| unnamed protein product [Vitis vinifera] 71 1e-10 ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 71 1e-10 emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera] 71 1e-10 ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi... 71 2e-10 ref|XP_002439130.1| hypothetical protein SORBIDRAFT_09g001100 [S... 70 3e-10 >emb|CBI31649.3| unnamed protein product [Vitis vinifera] Length = 761 Score = 71.2 bits (173), Expect = 1e-10 Identities = 41/78 (52%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = -3 Query: 640 RHELPTDPNNSVEINNREQSVDEEAVGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYTE 464 RHELP++ NS E N + EE VGLTIWRLP LP VYTE Sbjct: 202 RHELPSEERNSPESN---EQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 258 Query: 463 MDGGFNNNGGGAPRRIQW 410 MDGGFNN GGAPRRI W Sbjct: 259 MDGGFNN--GGAPRRISW 274 >ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera] Length = 361 Score = 71.2 bits (173), Expect = 1e-10 Identities = 41/78 (52%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = -3 Query: 640 RHELPTDPNNSVEINNREQSVDEEAVGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYTE 464 RHELP++ NS E N + EE VGLTIWRLP LP VYTE Sbjct: 217 RHELPSEERNSPESN---EQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 273 Query: 463 MDGGFNNNGGGAPRRIQW 410 MDGGFNN GGAPRRI W Sbjct: 274 MDGGFNN--GGAPRRISW 289 >emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera] Length = 365 Score = 71.2 bits (173), Expect = 1e-10 Identities = 41/78 (52%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = -3 Query: 640 RHELPTDPNNSVEINNREQSVDEEAVGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYTE 464 RHELP++ NS E N + EE VGLTIWRLP LP VYTE Sbjct: 221 RHELPSEERNSPESN---EQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 277 Query: 463 MDGGFNNNGGGAPRRIQW 410 MDGGFNN GGAPRRI W Sbjct: 278 MDGGFNN--GGAPRRISW 293 >ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi|355507760|gb|AES88902.1| RING finger protein [Medicago truncatula] Length = 369 Score = 70.9 bits (172), Expect = 2e-10 Identities = 46/101 (45%), Positives = 51/101 (50%), Gaps = 2/101 (1%) Frame = -3 Query: 640 RHELPTDPNNSVEINNREQSVDEEAVGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYTE 464 RHELP+D NN +E Q +DEEA+GLTIWRLP P VYTE Sbjct: 222 RHELPSDLNNPLETRVSGQ-IDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTE 280 Query: 463 MDGGFNNNGGGAPRRI-QWXXXXXXXXXXXXXRAFRNFFSF 344 MDGG N G APRRI + R FRNFFSF Sbjct: 281 MDGGLNAAQGSAPRRISRTVRAHRVRESHGIGRVFRNFFSF 321 >ref|XP_002439130.1| hypothetical protein SORBIDRAFT_09g001100 [Sorghum bicolor] gi|241944415|gb|EES17560.1| hypothetical protein SORBIDRAFT_09g001100 [Sorghum bicolor] Length = 413 Score = 70.1 bits (170), Expect = 3e-10 Identities = 39/79 (49%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = -3 Query: 640 RHELPTDPNNSVEINNREQSVDEEA-VGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYT 467 RHE+PTD N +EEA VGLTIWRLP LP VYT Sbjct: 257 RHEMPTDATPRAAANAGAAGEEEEATVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYT 316 Query: 466 EMDGGFNNNGGGAPRRIQW 410 EMDGGFN+ G GAPRRI W Sbjct: 317 EMDGGFNSGGAGAPRRISW 335