BLASTX nr result

ID: Panax21_contig00026348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026348
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31649.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    71   1e-10
emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]    71   1e-10
ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi...    71   2e-10
ref|XP_002439130.1| hypothetical protein SORBIDRAFT_09g001100 [S...    70   3e-10

>emb|CBI31649.3| unnamed protein product [Vitis vinifera]
          Length = 761

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/78 (52%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -3

Query: 640 RHELPTDPNNSVEINNREQSVDEEAVGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYTE 464
           RHELP++  NS E N   +   EE VGLTIWRLP                   LP VYTE
Sbjct: 202 RHELPSEERNSPESN---EQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 258

Query: 463 MDGGFNNNGGGAPRRIQW 410
           MDGGFNN  GGAPRRI W
Sbjct: 259 MDGGFNN--GGAPRRISW 274


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/78 (52%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -3

Query: 640 RHELPTDPNNSVEINNREQSVDEEAVGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYTE 464
           RHELP++  NS E N   +   EE VGLTIWRLP                   LP VYTE
Sbjct: 217 RHELPSEERNSPESN---EQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 273

Query: 463 MDGGFNNNGGGAPRRIQW 410
           MDGGFNN  GGAPRRI W
Sbjct: 274 MDGGFNN--GGAPRRISW 289


>emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]
          Length = 365

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/78 (52%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -3

Query: 640 RHELPTDPNNSVEINNREQSVDEEAVGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYTE 464
           RHELP++  NS E N   +   EE VGLTIWRLP                   LP VYTE
Sbjct: 221 RHELPSEERNSPESN---EQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 277

Query: 463 MDGGFNNNGGGAPRRIQW 410
           MDGGFNN  GGAPRRI W
Sbjct: 278 MDGGFNN--GGAPRRISW 293


>ref|XP_003606705.1| RING finger protein [Medicago truncatula]
           gi|355507760|gb|AES88902.1| RING finger protein
           [Medicago truncatula]
          Length = 369

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 46/101 (45%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
 Frame = -3

Query: 640 RHELPTDPNNSVEINNREQSVDEEAVGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYTE 464
           RHELP+D NN +E     Q +DEEA+GLTIWRLP                    P VYTE
Sbjct: 222 RHELPSDLNNPLETRVSGQ-IDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTE 280

Query: 463 MDGGFNNNGGGAPRRI-QWXXXXXXXXXXXXXRAFRNFFSF 344
           MDGG N   G APRRI +              R FRNFFSF
Sbjct: 281 MDGGLNAAQGSAPRRISRTVRAHRVRESHGIGRVFRNFFSF 321


>ref|XP_002439130.1| hypothetical protein SORBIDRAFT_09g001100 [Sorghum bicolor]
           gi|241944415|gb|EES17560.1| hypothetical protein
           SORBIDRAFT_09g001100 [Sorghum bicolor]
          Length = 413

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 39/79 (49%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = -3

Query: 640 RHELPTDPNNSVEINNREQSVDEEA-VGLTIWRLPXXXXXXXXXXXXXXXXXE-LPAVYT 467
           RHE+PTD       N      +EEA VGLTIWRLP                   LP VYT
Sbjct: 257 RHEMPTDATPRAAANAGAAGEEEEATVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYT 316

Query: 466 EMDGGFNNNGGGAPRRIQW 410
           EMDGGFN+ G GAPRRI W
Sbjct: 317 EMDGGFNSGGAGAPRRISW 335


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