BLASTX nr result

ID: Panax21_contig00026338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026338
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95981.1| unknown [Populus trichocarpa]                          342   5e-92
ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|2...   332   5e-89
ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis ...   332   8e-89
gb|AFX95943.1| green-ripe like protein 1 [Solanum melongena]          329   4e-88
ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87

>gb|ABK95981.1| unknown [Populus trichocarpa]
          Length = 243

 Score =  342 bits (878), Expect = 5e-92
 Identities = 149/208 (71%), Positives = 173/208 (83%)
 Frame = -1

Query: 627 LSSGRLSIMELKPTVGIESKSFVRSIQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAP 448
           +S G+ S M+LK    +E  S    IQHELWPLD IDPKKAK PCCL+WTPLPVVSWLAP
Sbjct: 1   MSRGQFSAMDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAP 60

Query: 447 FIGHVGICSEDGAVIDFSGSNLINVDKFAYGAIARYIQLDREKCCFPPNLTGHTCKHRYI 268
           FIGHVGIC EDG ++DFSGSN +NVD F++GA ARY QLDRE+CCFPPNLTGHTCKH Y 
Sbjct: 61  FIGHVGICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQCCFPPNLTGHTCKHGYK 120

Query: 267 HTEYGSAMTWDDAIQSSVRHFEHKCYNLFTCNCHSFVANCLNRLCYNESMSWNMINVAAL 88
           H+EYG+A+TWDDA+QSS+RHF+HK YNLFTCNCHSFVANCLNRLCY  SM WNMI+VA L
Sbjct: 121 HSEYGTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVL 180

Query: 87  VLIEGQWVDKFSIVRSFLPFILVLCLAI 4
           +L +G W+D  SIVRSFLPF + LC+ +
Sbjct: 181 ILFKGHWIDWKSIVRSFLPFAVALCIGV 208


>ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|222866198|gb|EEF03329.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  332 bits (852), Expect = 5e-89
 Identities = 147/204 (72%), Positives = 169/204 (82%), Gaps = 4/204 (1%)
 Frame = -1

Query: 603 MELKPTVGIESKSFVRSIQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAPFIGHVGIC 424
           M+LK    +E  S    IQHELWPLD IDPKKAK PCCL+WTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 423 SEDGAVIDFSGSNLINVDKFAYGAIARYIQLDREK----CCFPPNLTGHTCKHRYIHTEY 256
            EDG ++DFSGSN +NVD F++GA ARY QLDRE+    CCFPPNLTGHTCKH Y H+EY
Sbjct: 61  REDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQGTGQCCFPPNLTGHTCKHGYKHSEY 120

Query: 255 GSAMTWDDAIQSSVRHFEHKCYNLFTCNCHSFVANCLNRLCYNESMSWNMINVAALVLIE 76
           G+A+TWDDA+QSS+RHF+HK YNLFTCNCHSFVANCLNRLCY  SM WNMI+VA L+L +
Sbjct: 121 GTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILFK 180

Query: 75  GQWVDKFSIVRSFLPFILVLCLAI 4
           G W+D  SIVRSFLPF +VLC+ +
Sbjct: 181 GHWIDWKSIVRSFLPFAVVLCIGV 204


>ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis vinifera]
           gi|296081665|emb|CBI20670.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  332 bits (850), Expect = 8e-89
 Identities = 149/208 (71%), Positives = 169/208 (81%)
 Frame = -1

Query: 627 LSSGRLSIMELKPTVGIESKSFVRSIQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAP 448
           +S  R+  MEL     +E  S  R  QHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAP
Sbjct: 1   MSPRRVPKMELNAINDVEDMSTARRTQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAP 60

Query: 447 FIGHVGICSEDGAVIDFSGSNLINVDKFAYGAIARYIQLDREKCCFPPNLTGHTCKHRYI 268
           FIGHVGIC EDGA++DF+GSN +NV+ FA+GA+ARY+QLDREKCCFPPNL GHTCK+ Y 
Sbjct: 61  FIGHVGICREDGAILDFAGSNFVNVNDFAFGAVARYLQLDREKCCFPPNLAGHTCKNGYK 120

Query: 267 HTEYGSAMTWDDAIQSSVRHFEHKCYNLFTCNCHSFVANCLNRLCYNESMSWNMINVAAL 88
           H E G+A+TWDDA+ SS  HF HK YNLFTCNCHSFVANCLNRL Y  SM WNMINV AL
Sbjct: 121 HAENGTAVTWDDALLSSSHHFGHKSYNLFTCNCHSFVANCLNRLAYGGSMGWNMINVCAL 180

Query: 87  VLIEGQWVDKFSIVRSFLPFILVLCLAI 4
           +L +G+WVD  SI RSF PF+LVLCL +
Sbjct: 181 ILFKGRWVDSMSIFRSFSPFMLVLCLGV 208


>gb|AFX95943.1| green-ripe like protein 1 [Solanum melongena]
          Length = 243

 Score =  329 bits (844), Expect = 4e-88
 Identities = 145/208 (69%), Positives = 174/208 (83%)
 Frame = -1

Query: 627 LSSGRLSIMELKPTVGIESKSFVRSIQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAP 448
           + SG LS+M+L+P   +ES   ++ IQHE WPLDEI+P+ AK PCCLVWTPLPVVSWLAP
Sbjct: 1   MPSGGLSLMDLEPAYKMESVRTIQDIQHEFWPLDEINPEAAKFPCCLVWTPLPVVSWLAP 60

Query: 447 FIGHVGICSEDGAVIDFSGSNLINVDKFAYGAIARYIQLDREKCCFPPNLTGHTCKHRYI 268
           FIGHVGIC+EDG+ + FSGSN INVD FA+G++A+Y+QLDR++CCFP N+  HTCKH Y 
Sbjct: 61  FIGHVGICTEDGSAVAFSGSNFINVDDFAFGSVAKYLQLDRKQCCFPRNIGAHTCKHGYK 120

Query: 267 HTEYGSAMTWDDAIQSSVRHFEHKCYNLFTCNCHSFVANCLNRLCYNESMSWNMINVAAL 88
           HTE+GSA+TWDDAIQSSVRHFEHK YNLFTCN +SF+ANCLNRLCY  S+ WNMINV AL
Sbjct: 121 HTEFGSAITWDDAIQSSVRHFEHKSYNLFTCNSYSFLANCLNRLCYGGSVDWNMINVGAL 180

Query: 87  VLIEGQWVDKFSIVRSFLPFILVLCLAI 4
           +L +G WVD  SI+RSF PFILV+C  I
Sbjct: 181 LLFKGHWVDNLSILRSFSPFILVVCFGI 208


>ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|222854541|gb|EEE92088.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  327 bits (839), Expect = 2e-87
 Identities = 142/200 (71%), Positives = 165/200 (82%)
 Frame = -1

Query: 603 MELKPTVGIESKSFVRSIQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAPFIGHVGIC 424
           M+LK    +E  S    IQH+LWPLD IDPKKAK PCCL+WTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAFDVEHMSSTSRIQHDLWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 423 SEDGAVIDFSGSNLINVDKFAYGAIARYIQLDREKCCFPPNLTGHTCKHRYIHTEYGSAM 244
            EDG ++DFSGSN +NVD F +GA ARY+QLDRE+CCFPPNL GHTCKH Y H+EYG+A+
Sbjct: 61  REDGTILDFSGSNSVNVDDFTFGAAARYLQLDREQCCFPPNLAGHTCKHGYKHSEYGTAI 120

Query: 243 TWDDAIQSSVRHFEHKCYNLFTCNCHSFVANCLNRLCYNESMSWNMINVAALVLIEGQWV 64
           TWDDA+QSS R FEHK YNLFTCNCHSFVA+CLNR CY  SM WN+I+VA L+L +G W+
Sbjct: 121 TWDDALQSSTRSFEHKTYNLFTCNCHSFVAHCLNRFCYGGSMDWNLIDVAVLILFKGHWI 180

Query: 63  DKFSIVRSFLPFILVLCLAI 4
           D  SI++SFLPF +VLCL I
Sbjct: 181 DWKSIIKSFLPFTIVLCLGI 200


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