BLASTX nr result

ID: Panax21_contig00026335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026335
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81071.1| hypothetical protein VITISV_001976 [Vitis vinifera]   105   4e-21
ref|XP_002328647.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>emb|CAN81071.1| hypothetical protein VITISV_001976 [Vitis vinifera]
          Length = 1863

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
 Frame = +3

Query: 3    IQGNFSSAFNSGFPFSRSQPQDQLMPGARRQGSMNQSIDVPFDRHALRSKQADDSCRKL- 179
            I G+FS+AF  GFP+SRS  Q+Q M  A  Q + +QS++  FDR A  S++ DDS  ++ 
Sbjct: 1087 IGGSFSTAFTPGFPYSRSPLQNQHMTVASGQVTSDQSVNASFDRFAACSRKVDDSYDRIP 1146

Query: 180  TGQSAETSLRNAADSIPYDKATSSANISRPTALNHLHDRAPAAQISAGEVLSISQSFTTT 359
            T QSA   L + A + PY+   S +++SR ++ N LH R    Q    E + +S+   ++
Sbjct: 1147 TSQSATAPLSDLAANAPYNNIASMSDMSRLSSSNQLHVRGSTQQTPVLEAVPVSRPSFSS 1206

Query: 360  GISQQDDFPKKIPNTWTNVPAQQQFLGAQARQ 455
            G S QD F  K+PN WTNV  QQ   G +A +
Sbjct: 1207 GTSHQDGF-SKVPNVWTNVSTQQCLPGVEAHK 1237


>ref|XP_002328647.1| predicted protein [Populus trichocarpa] gi|222838823|gb|EEE77174.1|
            predicted protein [Populus trichocarpa]
          Length = 1391

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
 Frame = +3

Query: 6    QGNFSSAFNSGFPFSRSQPQDQLMPGARRQGSMNQSIDVPFDRHALRSKQADDSC-RKLT 182
            QG FS+AF  GFP+S+S   +Q MP    + +  +S++  FDR + + K  ++S  R   
Sbjct: 663  QGKFSTAFPPGFPYSKSHLPNQHMPDTGGRATACESVNESFDRFSSQPKHTEESFERGQL 722

Query: 183  GQSAETSLRNAADSIPYDKATSSANISRPTALNHLHDRAPAAQISAGEVLSISQSFTTTG 362
             QSA   + + +    ++   SS  + +P+  +  H R  A Q    E     Q +    
Sbjct: 723  NQSAGPLVPDTSRHTSHNDFASSTEMPQPSD-DQNHARDSAQQFPVLEASPAPQRYA--- 778

Query: 363  ISQQDDFPKKIPNT-WTNVPAQQQFLGAQARQVQPKLSQP 479
             S QD F  K+P T WT+VP Q    G Q+ Q  P + +P
Sbjct: 779  -SSQDGFSSKMPPTLWTSVPTQLHPFGTQSFQTGPNMFKP 817


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