BLASTX nr result

ID: Panax21_contig00026320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026320
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528839.1| pentatricopeptide repeat-containing protein,...   174   9e-42
emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]   172   4e-41
ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...   171   6e-41
emb|CBI31172.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat...   159   3e-37

>ref|XP_002528839.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531751|gb|EEF33573.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 393

 Score =  174 bits (441), Expect = 9e-42
 Identities = 86/107 (80%), Positives = 92/107 (85%)
 Frame = -1

Query: 327 SQMDGVRKVFEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVL 148
           S +D VRKVFE M  RD+VSWN VI+G A NGMHEE L++VREMGN NLKPD FTLSSVL
Sbjct: 135 SDVDSVRKVFEMMPKRDLVSWNTVIAGNAHNGMHEEALVMVREMGNVNLKPDSFTLSSVL 194

Query: 147 PIFAEYVNVLKGKEIHGYAIRHGFDADVFIGSSLINMYANCTRVEDS 7
           PIFAEYVNV KGKEIHGYAIRHG D DVFIGSSLI+MYA CTRVEDS
Sbjct: 195 PIFAEYVNVDKGKEIHGYAIRHGLDGDVFIGSSLIDMYAKCTRVEDS 241



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 42/98 (42%), Positives = 62/98 (63%)
 Frame = -1

Query: 306 KVFEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVLPIFAEYV 127
           +VF  +  RD +SWN +I+G  QN + +E L   R+M  AN+KP   + SS+LP  A   
Sbjct: 243 RVFSLLPRRDDISWNSIIAGCVQNSLFDEGLRFFRQMLKANVKPRQVSFSSILPACAHLT 302

Query: 126 NVLKGKEIHGYAIRHGFDADVFIGSSLINMYANCTRVE 13
            +  G+++HGY +R  FD +VFI SSL++MYA C  V+
Sbjct: 303 TLNLGRQLHGYILRVRFDNNVFIASSLVDMYAKCGNVK 340


>emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  172 bits (436), Expect = 4e-41
 Identities = 100/193 (51%), Positives = 124/193 (64%), Gaps = 19/193 (9%)
 Frame = -1

Query: 528 LDHFGGLRFQAQQVFDGSTETKQV--YGNGSKVVCFNQNIKKQLMGF---GDLERTGNEV 364
           L+  G  RF   ++  G  E +++    N   + C    + +++ G    GDL +  N +
Sbjct: 61  LEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPC---ELDERVAGIDQNGDLNQMSNIL 117

Query: 363 AQSNIKGTPFANSQMDGV--------------RKVFEGMAIRDIVSWNIVISGYAQNGMH 226
            Q N     F   +   V              RKVFE M  RDIVSWN VISG AQNGMH
Sbjct: 118 YQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMH 177

Query: 225 EEVLLLVREMGNANLKPDVFTLSSVLPIFAEYVNVLKGKEIHGYAIRHGFDADVFIGSSL 46
           E+ L++VREMGNA+L+PD FTLSSVLPIFAEYVN+LKGKEIHGYAIR+G+DADVFIGSSL
Sbjct: 178 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 237

Query: 45  INMYANCTRVEDS 7
           I+MYA CTRV+DS
Sbjct: 238 IDMYAKCTRVDDS 250



 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 41/104 (39%), Positives = 65/104 (62%)
 Frame = -1

Query: 327 SQMDGVRKVFEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVL 148
           +++D   +VF  +   D +SWN +I+G  QNGM +E L   ++M  A +KP+  + SS++
Sbjct: 245 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 304

Query: 147 PIFAEYVNVLKGKEIHGYAIRHGFDADVFIGSSLINMYANCTRV 16
           P  A    +  GK++HGY IR  FD +VFI S+L++MYA C  +
Sbjct: 305 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNI 348


>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  171 bits (434), Expect = 6e-41
 Identities = 83/105 (79%), Positives = 95/105 (90%)
 Frame = -1

Query: 321 MDGVRKVFEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVLPI 142
           +  +RKVFE M  RDIVSWN VISG AQNGMHE+ L++VREMGNA+L+PD FTLSSVLPI
Sbjct: 186 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 245

Query: 141 FAEYVNVLKGKEIHGYAIRHGFDADVFIGSSLINMYANCTRVEDS 7
           FAEYVN+LKGKEIHGYAIR+G+DADVFIGSSLI+MYA CTRV+DS
Sbjct: 246 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDS 290



 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 41/104 (39%), Positives = 65/104 (62%)
 Frame = -1

Query: 327 SQMDGVRKVFEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVL 148
           +++D   +VF  +   D +SWN +I+G  QNGM +E L   ++M  A +KP+  + SS++
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344

Query: 147 PIFAEYVNVLKGKEIHGYAIRHGFDADVFIGSSLINMYANCTRV 16
           P  A    +  GK++HGY IR  FD +VFI S+L++MYA C  +
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNI 388


>emb|CBI31172.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  171 bits (434), Expect = 6e-41
 Identities = 83/105 (79%), Positives = 95/105 (90%)
 Frame = -1

Query: 321 MDGVRKVFEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVLPI 142
           +  +RKVFE M  RDIVSWN VISG AQNGMHE+ L++VREMGNA+L+PD FTLSSVLPI
Sbjct: 186 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 245

Query: 141 FAEYVNVLKGKEIHGYAIRHGFDADVFIGSSLINMYANCTRVEDS 7
           FAEYVN+LKGKEIHGYAIR+G+DADVFIGSSLI+MYA CTRV+DS
Sbjct: 246 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDS 290



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/81 (37%), Positives = 49/81 (60%)
 Frame = -1

Query: 327 SQMDGVRKVFEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVL 148
           +++D   +VF  +   D +SWN +I+G  QNGM +E L   ++M  A +KP+  + SS++
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344

Query: 147 PIFAEYVNVLKGKEIHGYAIR 85
           P  A    +  GK++HGY IR
Sbjct: 345 PACAHLTTLHLGKQLHGYIIR 365


>ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  159 bits (402), Expect = 3e-37
 Identities = 74/104 (71%), Positives = 89/104 (85%)
 Frame = -1

Query: 324 QMDGVRKVFEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVLP 145
           ++D VRK+F+ M +RD+VSWN VI+G AQNGM+EE L +V+EMG  NL+PD FTLSS+LP
Sbjct: 148 KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILP 207

Query: 144 IFAEYVNVLKGKEIHGYAIRHGFDADVFIGSSLINMYANCTRVE 13
           IF E+ NV KGKEIHGYAIRHGFD DVFIGSSLI+MYA CT+VE
Sbjct: 208 IFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVE 251



 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 39/96 (40%), Positives = 57/96 (59%)
 Frame = -1

Query: 300 FEGMAIRDIVSWNIVISGYAQNGMHEEVLLLVREMGNANLKPDVFTLSSVLPIFAEYVNV 121
           F  ++ RD +SWN +I+G  QNG  ++ L   R M    +KP   + SSV+P  A    +
Sbjct: 257 FHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTAL 316

Query: 120 LKGKEIHGYAIRHGFDADVFIGSSLINMYANCTRVE 13
             GK++H Y IR GFD + FI SSL++MYA C  ++
Sbjct: 317 NLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIK 352


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